RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 USP17L17D6RBQ6 530 aa8.47□□□□□ -1.05
FN1-225ENST00000494446 USP17L19D6RCP7 530 aa8.47□□□□□ -1.05
FN1-225ENST00000494446 USP17L20D6RJB6 530 aa8.47□□□□□ -1.05
FN1-225ENST00000494446 RFXAPO00287 272 aa8.47□□□□□ -1.05
FN1-225ENST00000494446 GDF11O95390 407 aa8.47□□□□□ -1.05
FN1-225ENST00000494446 IGHA2P01877 340 aa8.47□□□□□ -1.05
FN1-225ENST00000494446 RARBP10826 455 aa8.47□□□□□ -1.05
FN1-225ENST00000494446 ADORA2AP29274 412 aa8.47□□□□□ -1.05
FN1-225ENST00000494446 PHKA1P46020 1223 aa8.47□□□□□ -1.05
FN1-225ENST00000494446 RABGGTBP53611 331 aa8.47□□□□□ -1.05
FN1-225ENST00000494446 USP17L24Q0WX57 530 aa8.47□□□□□ -1.05
FN1-225ENST00000494446 ATP2B3Q16720 1220 aa8.47□□□□□ -1.05
FN1-225ENST00000494446 CSPP1Q1MSJ5 1256 aa8.47□□□□□ -1.05
FN1-225ENST00000494446 PPP2R2DQ66LE6 453 aa8.47□□□□□ -1.05
FN1-225ENST00000494446 PSRC1Q6PGN9 363 aaPredicted RBP8.47□□□□□ -1.05
FN1-225ENST00000494446 TMEM199Q8N511 208 aa8.47□□□□□ -1.05
FN1-225ENST00000494446 ANKRD44Q8N8A2 993 aa8.47□□□□□ -1.05
FN1-225ENST00000494446 FAM163AQ96GL9 167 aaPredicted RBP8.47□□□□□ -1.05
FN1-225ENST00000494446 CD320Q9NPF0 282 aa8.47□□□□□ -1.05
FN1-225ENST00000494446 COG5Q9UP83 839 aa8.47□□□□□ -1.05
FN1-225ENST00000494446 COL11A1P12107 1806 aaPredicted RBP8.47□□□□□ -1.05
FN1-225ENST00000494446 GPR75-ASB3A0A0A6YYF3 556 aa8.46□□□□□ -1.06
FN1-225ENST00000494446 EYA2O00167 538 aa8.46□□□□□ -1.06
FN1-225ENST00000494446 SEMA3EO15041 775 aa8.46□□□□□ -1.06
FN1-225ENST00000494446 GTPBP6O43824 516 aaPredicted RBP8.46□□□□□ -1.06
FN1-225ENST00000494446 MYOGP15173 224 aa8.46□□□□□ -1.06
FN1-225ENST00000494446 CD44P16070 742 aaKnown RBP8.46□□□□□ -1.06
FN1-225ENST00000494446 MECOMQ03112 1051 aa8.46□□□□□ -1.06
FN1-225ENST00000494446 RABL6Q3YEC7 729 aaPredicted RBP8.46□□□□□ -1.06
FN1-225ENST00000494446 SPTY2D1Q68D10 685 aaPredicted RBP8.46□□□□□ -1.06
FN1-225ENST00000494446 ANKRD33Q7Z3H0 272 aa8.46□□□□□ -1.06
FN1-225ENST00000494446 CRACR2BQ8N4Y2 399 aaPredicted RBP8.46□□□□□ -1.06
FN1-225ENST00000494446 HLA-CQ95604 372 aa8.46□□□□□ -1.06
FN1-225ENST00000494446 FBXL18Q96ME1 805 aa8.46□□□□□ -1.06
FN1-225ENST00000494446 TOX2Q96NM4 488 aa8.46□□□□□ -1.06
FN1-225ENST00000494446 DCBLD2Q96PD2 775 aa8.46□□□□□ -1.06
FN1-225ENST00000494446 TRIM34Q9BYJ4 488 aa8.46□□□□□ -1.06
FN1-225ENST00000494446 PPP1R12CQ9BZL4 782 aa8.46□□□□□ -1.06
FN1-225ENST00000494446 MTIF3Q9H2K0 278 aaKnown RBP8.46□□□□□ -1.06
FN1-225ENST00000494446 STARD7Q9NQZ5 370 aa8.46□□□□□ -1.06
FN1-225ENST00000494446 PI4KBQ9UBF8 816 aa8.46□□□□□ -1.06
FN1-225ENST00000494446 TBX21Q9UL17 535 aa8.46□□□□□ -1.06
FN1-225ENST00000494446 ZBTB21Q9ULJ3 1066 aa8.46□□□□□ -1.06
FN1-225ENST00000494446 MTCH2Q9Y6C9 303 aa8.46□□□□□ -1.06
FN1-225ENST00000494446 MYO5AQ9Y4I1 1855 aaKnown RBP8.46□□□□□ -1.06
FN1-225ENST00000494446 CFAP54Q96N23 3096 aa8.46□□□□□ -1.06
FN1-225ENST00000494446 MCM3APO60318 1980 aa8.46□□□□□ -1.06
FN1-225ENST00000494446 TRIOO75962 3097 aa8.45□□□□□ -1.06
FN1-225ENST00000494446 STRNO43815 780 aa8.45□□□□□ -1.06
FN1-225ENST00000494446 COBLO75128 1261 aa8.45□□□□□ -1.06
FN1-225ENST00000494446 VAMP4O75379 141 aa8.45□□□□□ -1.06
FN1-225ENST00000494446 FGBP02675 491 aa8.45□□□□□ -1.06
FN1-225ENST00000494446 KRT40Q6A162 431 aa8.45□□□□□ -1.06
FN1-225ENST00000494446 CATSPERGQ6ZRH7 1159 aa8.45□□□□□ -1.06
FN1-225ENST00000494446 ERICH6Q7L0X2 663 aa8.45□□□□□ -1.06
FN1-225ENST00000494446 OTOP2Q7RTS6 562 aa8.45□□□□□ -1.06
FN1-225ENST00000494446 TEX11Q8IYF3 940 aa8.45□□□□□ -1.06
FN1-225ENST00000494446 NUP133Q8WUM0 1156 aa8.45□□□□□ -1.06
FN1-225ENST00000494446 FEZ1Q99689 392 aa8.45□□□□□ -1.06
FN1-225ENST00000494446 CERS4Q9HA82 394 aa8.45□□□□□ -1.06
FN1-225ENST00000494446 SLC5A4Q9NY91 659 aa8.45□□□□□ -1.06
FN1-225ENST00000494446 SSUH2Q9Y2M2 353 aa8.45□□□□□ -1.06
FN1-225ENST00000494446 COL4A4P53420 1690 aaPredicted RBP8.45□□□□□ -1.06
FN1-225ENST00000494446 ZNF521Q96K83 1311 aa8.45□□□□□ -1.06
FN1-225ENST00000494446 SCN5AQ14524 2016 aa8.44□□□□□ -1.06
FN1-225ENST00000494446 ZFHX2Q9C0A1 2572 aaPredicted RBP8.44□□□□□ -1.06
FN1-225ENST00000494446 LDHCP07864 332 aa8.44□□□□□ -1.06
FN1-225ENST00000494446 ACLYP53396 1101 aa8.44□□□□□ -1.06
FN1-225ENST00000494446 ZNF384Q8TF68 577 aa8.44□□□□□ -1.06
FN1-225ENST00000494446 VTI1AQ96AJ9 217 aa8.44□□□□□ -1.06
FN1-225ENST00000494446 LENG1Q96BZ8 264 aaPredicted RBP8.44□□□□□ -1.06
FN1-225ENST00000494446 MAML3Q96JK9 1138 aa8.44□□□□□ -1.06
FN1-225ENST00000494446 MOV10L1Q9BXT6 1211 aaKnown RBP8.44□□□□□ -1.06
FN1-225ENST00000494446 SIL1Q9H173 461 aa8.44□□□□□ -1.06
FN1-225ENST00000494446 IL23AQ9NPF7 189 aa8.44□□□□□ -1.06
FN1-225ENST00000494446 CEP126Q9P2H0 1117 aa8.44□□□□□ -1.06
FN1-225ENST00000494446 PARP14Q460N5 1801 aa8.44□□□□□ -1.06
FN1-225ENST00000494446 USP34Q70CQ2 3546 aa8.43□□□□□ -1.06
FN1-225ENST00000494446 SPDYE16A6NNV3 312 aaPredicted RBP8.43□□□□□ -1.06
FN1-225ENST00000494446 MAP4K4O95819 1239 aaPredicted RBP8.43□□□□□ -1.06
FN1-225ENST00000494446 ERCC3P19447 782 aa8.43□□□□□ -1.06
FN1-225ENST00000494446 POU3F3P20264 500 aaPredicted RBP8.43□□□□□ -1.06
FN1-225ENST00000494446 ADORA1P30542 326 aa8.43□□□□□ -1.06
FN1-225ENST00000494446 SSTR3P32745 418 aaPredicted RBP8.43□□□□□ -1.06
FN1-225ENST00000494446 CYP2C18P33260 490 aa8.43□□□□□ -1.06
FN1-225ENST00000494446 GSTO1P78417 241 aa8.43□□□□□ -1.06
FN1-225ENST00000494446 RASGRF1Q13972 1273 aa8.43□□□□□ -1.06
FN1-225ENST00000494446 CCDC102BQ68D86 513 aa8.43□□□□□ -1.06
FN1-225ENST00000494446 LBX2Q6XYB7 198 aa8.43□□□□□ -1.06
FN1-225ENST00000494446 ATG9AQ7Z3C6 839 aa8.43□□□□□ -1.06
FN1-225ENST00000494446 FOXP4Q8IVH2 680 aaPredicted RBP8.43□□□□□ -1.06
FN1-225ENST00000494446 SH3RF3Q8TEJ3 882 aaPredicted RBP8.43□□□□□ -1.06
FN1-225ENST00000494446 C12orf42Q96LP6 360 aa8.43□□□□□ -1.06
FN1-225ENST00000494446 PHOX2BQ99453 314 aa8.43□□□□□ -1.06
FN1-225ENST00000494446 TSEN34Q9BSV6 310 aaKnown RBP8.43□□□□□ -1.06
FN1-225ENST00000494446 KCNH6Q9H252 994 aa8.43□□□□□ -1.06
FN1-225ENST00000494446 DHX36Q9H2U1 1008 aaKnown RBP8.43□□□□□ -1.06
FN1-225ENST00000494446 DNAJC18Q9H819 358 aa8.43□□□□□ -1.06
FN1-225ENST00000494446 GINM1Q9NU53 330 aa8.43□□□□□ -1.06
FN1-225ENST00000494446 PCDHA11Q9Y5I1 949 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms