RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 CNTROBQ8N137 903 aa10.27□□□□□ -0.77
RIF1-211ENST00000494333 TTLL11Q8NHH1 800 aa10.27□□□□□ -0.77
RIF1-211ENST00000494333 DNAAF4Q8WXU2 420 aa10.27□□□□□ -0.77
RIF1-211ENST00000494333 ANO2Q9NQ90 1003 aa10.27□□□□□ -0.77
RIF1-211ENST00000494333 YDJCA8MPS7 323 aa10.26□□□□□ -0.77
RIF1-211ENST00000494333 F6X3S4 739 aa10.26□□□□□ -0.77
RIF1-211ENST00000494333 IDH3AP50213 366 aa10.26□□□□□ -0.77
RIF1-211ENST00000494333 CTSWP56202 376 aa10.26□□□□□ -0.77
RIF1-211ENST00000494333 ZNF211Q13398 564 aaPredicted RBP10.26□□□□□ -0.77
RIF1-211ENST00000494333 ANKRD18AQ8IVF6 992 aa10.26□□□□□ -0.77
RIF1-211ENST00000494333 LINS1Q8NG48 757 aa10.26□□□□□ -0.77
RIF1-211ENST00000494333 TBC1D16Q8TBP0 767 aa10.26□□□□□ -0.77
RIF1-211ENST00000494333 GPR101Q96P66 508 aaPredicted RBP10.26□□□□□ -0.77
RIF1-211ENST00000494333 EYA3Q99504 573 aa10.26□□□□□ -0.77
RIF1-211ENST00000494333 BCL2L13Q9BXK5 485 aa10.26□□□□□ -0.77
RIF1-211ENST00000494333 ZC3H12CQ9C0D7 883 aaKnown RBP10.26□□□□□ -0.77
RIF1-211ENST00000494333 DBNDD1Q9H9R9 158 aa10.26□□□□□ -0.77
RIF1-211ENST00000494333 BRD7Q9NPI1 651 aa10.26□□□□□ -0.77
RIF1-211ENST00000494333 GPRC5DQ9NZD1 345 aa10.26□□□□□ -0.77
RIF1-211ENST00000494333 ZBTB39O15060 712 aa10.25□□□□□ -0.77
RIF1-211ENST00000494333 FGFR3P22607 806 aa10.25□□□□□ -0.77
RIF1-211ENST00000494333 GMPSP49915 693 aaPredicted RBP10.25□□□□□ -0.77
RIF1-211ENST00000494333 SFSWAPQ12872 951 aaKnown RBP10.25□□□□□ -0.77
RIF1-211ENST00000494333 USP50Q70EL3 339 aaPredicted RBP10.25□□□□□ -0.77
RIF1-211ENST00000494333 CDC5LQ99459 802 aaKnown RBP10.25□□□□□ -0.77
RIF1-211ENST00000494333 GREM2Q9H772 168 aa10.25□□□□□ -0.77
RIF1-211ENST00000494333 PODXL2Q9NZ53 605 aa10.25□□□□□ -0.77
RIF1-211ENST00000494333 GNEQ9Y223 722 aaKnown RBP10.25□□□□□ -0.77
RIF1-211ENST00000494333 ZNF521Q96K83 1311 aa10.25□□□□□ -0.77
RIF1-211ENST00000494333 PASKQ96RG2 1323 aa10.25□□□□□ -0.77
RIF1-211ENST00000494333 CEP350Q5VT06 3117 aa10.24□□□□□ -0.77
RIF1-211ENST00000494333 UFL1O94874 794 aa10.24□□□□□ -0.77
RIF1-211ENST00000494333 CD33P20138 364 aa10.24□□□□□ -0.77
RIF1-211ENST00000494333 INPP5BP32019 993 aa10.24□□□□□ -0.77
RIF1-211ENST00000494333 CTBSQ01459 385 aa10.24□□□□□ -0.77
RIF1-211ENST00000494333 KCNA1Q09470 495 aa10.24□□□□□ -0.77
RIF1-211ENST00000494333 LAMC2Q13753 1193 aa10.24□□□□□ -0.77
RIF1-211ENST00000494333 BEND3Q5T5X7 828 aa10.24□□□□□ -0.77
RIF1-211ENST00000494333 JMYQ8N9B5 988 aa10.24□□□□□ -0.77
RIF1-211ENST00000494333 CNTNAP3BQ96NU0 1288 aa10.24□□□□□ -0.77
RIF1-211ENST00000494333 CNTNAP3Q9BZ76 1288 aa10.24□□□□□ -0.77
RIF1-211ENST00000494333 KCNQ5Q9NR82 932 aa10.24□□□□□ -0.77
RIF1-211ENST00000494333 ADARB2Q9NS39 739 aaKnown RBP10.24□□□□□ -0.77
RIF1-211ENST00000494333 BSDC1Q9NW68 430 aaPredicted RBP10.24□□□□□ -0.77
RIF1-211ENST00000494333 CNOT7Q9UIV1 285 aaKnown RBP10.24□□□□□ -0.77
RIF1-211ENST00000494333 GGA1Q9UJY5 639 aa10.24□□□□□ -0.77
RIF1-211ENST00000494333 PSMD14O00487 310 aa10.23□□□□□ -0.77
RIF1-211ENST00000494333 OPLAHO14841 1288 aa10.23□□□□□ -0.77
RIF1-211ENST00000494333 ECE2O60344 883 aa10.23□□□□□ -0.77
RIF1-211ENST00000494333 MX2P20592 715 aa10.23□□□□□ -0.77
RIF1-211ENST00000494333 CASP7P55210 303 aa10.23□□□□□ -0.77
RIF1-211ENST00000494333 PLA2G12BQ9BX93 195 aa10.23□□□□□ -0.77
RIF1-211ENST00000494333 MARK1Q9P0L2 795 aa10.23□□□□□ -0.77
RIF1-211ENST00000494333 EGFL7Q9UHF1 273 aa10.23□□□□□ -0.77
RIF1-211ENST00000494333 MINPP1Q9UNW1 487 aa10.23□□□□□ -0.77
RIF1-211ENST00000494333 DDX60Q8IY21 1712 aaKnown RBP10.23□□□□□ -0.77
RIF1-211ENST00000494333 XDHP47989 1333 aa10.23□□□□□ -0.77
RIF1-211ENST00000494333 LAMB2P55268 1798 aa10.23□□□□□ -0.77
RIF1-211ENST00000494333 SCN4AP35499 1836 aa10.23□□□□□ -0.77
RIF1-211ENST00000494333 TAF1P21675 1872 aa10.23□□□□□ -0.77
RIF1-211ENST00000494333 COL4A1P02462 1669 aa10.22□□□□□ -0.77
RIF1-211ENST00000494333 WTIPA6NIX2 430 aaPredicted RBP10.22□□□□□ -0.77
RIF1-211ENST00000494333 E9PSI1 815 aa10.22□□□□□ -0.77
RIF1-211ENST00000494333 H7C1D1 291 aa10.22□□□□□ -0.77
RIF1-211ENST00000494333 CSF1RP07333 972 aa10.22□□□□□ -0.77
RIF1-211ENST00000494333 MPSTP25325 297 aa10.22□□□□□ -0.77
RIF1-211ENST00000494333 IGHMBP2P38935 993 aaKnown RBP10.22□□□□□ -0.77
RIF1-211ENST00000494333 ARSDP51689 593 aa10.22□□□□□ -0.77
RIF1-211ENST00000494333 FMR1Q06787 632 aaKnown RBP eCLIP10.22□□□□□ -0.774e-9■■□□□ 13.5
RIF1-211ENST00000494333 GRIN2CQ14957 1233 aa10.22□□□□□ -0.77
RIF1-211ENST00000494333 SLC4A10Q6U841 1118 aa10.22□□□□□ -0.77
RIF1-211ENST00000494333 DPF2Q92785 391 aa10.22□□□□□ -0.77
RIF1-211ENST00000494333 SHTN1A0MZ66 631 aa10.21□□□□□ -0.77
RIF1-211ENST00000494333 CCER2I3L3R5 266 aa10.21□□□□□ -0.77
RIF1-211ENST00000494333 C2CD2LO14523 706 aa10.21□□□□□ -0.77
RIF1-211ENST00000494333 ICMTO60725 284 aa10.21□□□□□ -0.77
RIF1-211ENST00000494333 NPR3P17342 541 aa10.21□□□□□ -0.77
RIF1-211ENST00000494333 GRNP28799 593 aaKnown RBP10.21□□□□□ -0.77
RIF1-211ENST00000494333 SLFN5Q08AF3 891 aa10.21□□□□□ -0.77
RIF1-211ENST00000494333 MPHOSPH8Q99549 860 aa10.21□□□□□ -0.77
RIF1-211ENST00000494333 C9orf78Q9NZ63 289 aaPredicted RBP10.21□□□□□ -0.77
RIF1-211ENST00000494333 KCNH4Q9UQ05 1017 aa10.21□□□□□ -0.77
RIF1-211ENST00000494333 USP20Q9Y2K6 914 aa10.21□□□□□ -0.77
RIF1-211ENST00000494333 DUOX1Q9NRD9 1551 aa10.21□□□□□ -0.78
RIF1-211ENST00000494333 ANKRD18BA2A2Z9 1011 aa10.2□□□□□ -0.78
RIF1-211ENST00000494333 GRM8O00222 908 aa10.2□□□□□ -0.78
RIF1-211ENST00000494333 TRAF5O00463 557 aa10.2□□□□□ -0.78
RIF1-211ENST00000494333 VIL1P09327 827 aaKnown RBP10.2□□□□□ -0.78
RIF1-211ENST00000494333 RPS12P25398 132 aaKnown RBP10.2□□□□□ -0.78
RIF1-211ENST00000494333 ZAP70P43403 619 aa10.2□□□□□ -0.78
RIF1-211ENST00000494333 CCT4P50991 539 aaKnown RBP10.2□□□□□ -0.78
RIF1-211ENST00000494333 FOXO4P98177 505 aa10.2□□□□□ -0.78
RIF1-211ENST00000494333 IFIT5Q13325 482 aaKnown RBP10.2□□□□□ -0.78
RIF1-211ENST00000494333 DEFB115Q30KQ5 88 aa10.2□□□□□ -0.78
RIF1-211ENST00000494333 PODNQ7Z5L7 613 aa10.2□□□□□ -0.78
RIF1-211ENST00000494333 KCTD17Q8N5Z5 321 aa10.2□□□□□ -0.78
RIF1-211ENST00000494333 RTL9Q8NET4 1388 aa10.2□□□□□ -0.78
RIF1-211ENST00000494333 TRPM4Q8TD43 1214 aa10.2□□□□□ -0.78
RIF1-211ENST00000494333 SRCIN1Q9C0H9 1055 aa10.2□□□□□ -0.78
RIF1-211ENST00000494333 PGAP2Q9UHJ9 254 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms