RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 CAMTA1Q9Y6Y1 1673 aa3.64□□□□□ -1.83
CDC42EP3-205ENST00000494083 PRPF40AO75400 957 aaKnown RBP3.64□□□□□ -1.83
CDC42EP3-205ENST00000494083 PRNPP04156 253 aa3.64□□□□□ -1.83
CDC42EP3-205ENST00000494083 ZFYVE1Q9HBF4 777 aa3.64□□□□□ -1.83
CDC42EP3-205ENST00000494083 FMN2Q9NZ56 1722 aa3.64□□□□□ -1.83
CDC42EP3-205ENST00000494083 ABCC1P33527 1531 aa3.64□□□□□ -1.83
CDC42EP3-205ENST00000494083 PDIA4P13667 645 aaKnown RBP3.64□□□□□ -1.83
CDC42EP3-205ENST00000494083 ARMCX6Q7L4S7 300 aa3.64□□□□□ -1.83
CDC42EP3-205ENST00000494083 GIMAP7Q8NHV1 300 aa3.64□□□□□ -1.83
CDC42EP3-205ENST00000494083 RIN3Q8TB24 985 aa3.64□□□□□ -1.83
CDC42EP3-205ENST00000494083 KIF1BO60333 1816 aa3.63□□□□□ -1.83
CDC42EP3-205ENST00000494083 ERCC6L2Q5T890 1561 aa3.63□□□□□ -1.83
CDC42EP3-205ENST00000494083 CD8BP10966 210 aa3.63□□□□□ -1.83
CDC42EP3-205ENST00000494083 PICK1Q9NRD5 415 aa3.63□□□□□ -1.83
CDC42EP3-205ENST00000494083 KTN1Q86UP2 1357 aaKnown RBP3.63□□□□□ -1.83
CDC42EP3-205ENST00000494083 ABCC5O15440 1437 aa3.63□□□□□ -1.83
CDC42EP3-205ENST00000494083 KIAA1107Q9UPP5 1409 aa3.63□□□□□ -1.83
CDC42EP3-205ENST00000494083 NCOA3Q9Y6Q9 1424 aa3.63□□□□□ -1.83
CDC42EP3-205ENST00000494083 OXCT1P55809 520 aa3.63□□□□□ -1.83
CDC42EP3-205ENST00000494083 CPSF6Q16630 551 aaKnown RBP eCLIP3.63□□□□□ -1.83
CDC42EP3-205ENST00000494083 CEP44Q9C0F1 390 aa3.63□□□□□ -1.83
CDC42EP3-205ENST00000494083 IFT140Q96RY7 1462 aa3.63□□□□□ -1.83
CDC42EP3-205ENST00000494083 SCAF11Q99590 1463 aaKnown RBP3.63□□□□□ -1.83
CDC42EP3-205ENST00000494083 GLI2P10070 1586 aa3.63□□□□□ -1.83
CDC42EP3-205ENST00000494083 HECW2Q9P2P5 1572 aa3.63□□□□□ -1.83
CDC42EP3-205ENST00000494083 EIF4EBP3O60516 100 aaPredicted RBP3.62□□□□□ -1.83
CDC42EP3-205ENST00000494083 TRIM37O94972 964 aa3.62□□□□□ -1.83
CDC42EP3-205ENST00000494083 CEACAM5P06731 702 aa3.62□□□□□ -1.83
CDC42EP3-205ENST00000494083 EIF4BP23588 611 aaKnown RBP3.62□□□□□ -1.83
CDC42EP3-205ENST00000494083 CYP27A1Q02318 531 aa3.62□□□□□ -1.83
CDC42EP3-205ENST00000494083 EAPPQ56P03 285 aaPredicted RBP3.62□□□□□ -1.83
CDC42EP3-205ENST00000494083 ELMO3Q96BJ8 720 aa3.62□□□□□ -1.83
CDC42EP3-205ENST00000494083 SIPA1L3O60292 1781 aaPredicted RBP3.62□□□□□ -1.83
CDC42EP3-205ENST00000494083 ADGRB3O60242 1522 aa3.62□□□□□ -1.83
CDC42EP3-205ENST00000494083 ZFYVE16Q7Z3T8 1539 aa3.62□□□□□ -1.83
CDC42EP3-205ENST00000494083 PEAK1Q9H792 1746 aa3.62□□□□□ -1.83
CDC42EP3-205ENST00000494083 MYOM2P54296 1465 aa3.62□□□□□ -1.83
CDC42EP3-205ENST00000494083 PLCL1Q15111 1095 aa3.62□□□□□ -1.83
CDC42EP3-205ENST00000494083 FBXO33Q7Z6M2 555 aa3.62□□□□□ -1.83
CDC42EP3-205ENST00000494083 SPACA3Q8IXA5 215 aa3.62□□□□□ -1.83
CDC42EP3-205ENST00000494083 ARID4BQ4LE39 1312 aaPredicted RBP3.62□□□□□ -1.83
CDC42EP3-205ENST00000494083 SLITRK5O94991 958 aa3.62□□□□□ -1.83
CDC42EP3-205ENST00000494083 EOMESO95936 686 aa3.62□□□□□ -1.83
CDC42EP3-205ENST00000494083 NKPD1Q17RQ9 610 aa3.62□□□□□ -1.83
CDC42EP3-205ENST00000494083 CBLL1Q75N03 491 aa3.62□□□□□ -1.83
CDC42EP3-205ENST00000494083 FAM214BQ7L5A3 538 aa3.62□□□□□ -1.83
CDC42EP3-205ENST00000494083 CORINQ9Y5Q5 1042 aa3.62□□□□□ -1.83
CDC42EP3-205ENST00000494083 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.62□□□□□ -1.83
CDC42EP3-205ENST00000494083 TFE3P19532 575 aaPredicted RBP3.61□□□□□ -1.83
CDC42EP3-205ENST00000494083 SLBPQ14493 270 aaKnown RBP eCLIP3.61□□□□□ -1.83
CDC42EP3-205ENST00000494083 ZNF792Q3KQV3 632 aa3.61□□□□□ -1.83
CDC42EP3-205ENST00000494083 CYP27C1Q4G0S4 372 aa3.61□□□□□ -1.83
CDC42EP3-205ENST00000494083 KRTAP1-3Q8IUG1 177 aa3.61□□□□□ -1.83
CDC42EP3-205ENST00000494083 NETO1Q8TDF5 533 aa3.61□□□□□ -1.83
CDC42EP3-205ENST00000494083 PRDM10Q9NQV6 1147 aa3.61□□□□□ -1.83
CDC42EP3-205ENST00000494083 PCOLCE2Q9UKZ9 415 aa3.61□□□□□ -1.83
CDC42EP3-205ENST00000494083 AK5Q9Y6K8 562 aa3.61□□□□□ -1.83
CDC42EP3-205ENST00000494083 KIDINS220Q9ULH0 1771 aa3.61□□□□□ -1.83
CDC42EP3-205ENST00000494083 ADAMTSL3P82987 1691 aa3.61□□□□□ -1.83
CDC42EP3-205ENST00000494083 PARP4Q9UKK3 1724 aaKnown RBP3.61□□□□□ -1.83
CDC42EP3-205ENST00000494083 ERVK-7P63135 1459 aa3.61□□□□□ -1.83
CDC42EP3-205ENST00000494083 CENPBP07199 599 aaPredicted RBP3.61□□□□□ -1.83
CDC42EP3-205ENST00000494083 ETF1P62495 437 aaKnown RBP3.61□□□□□ -1.83
CDC42EP3-205ENST00000494083 SLC5A6Q9Y289 635 aa3.61□□□□□ -1.83
CDC42EP3-205ENST00000494083 FAM208AQ9UK61 1670 aaKnown RBP3.61□□□□□ -1.83
CDC42EP3-205ENST00000494083 LIG3P49916 1009 aa3.61□□□□□ -1.83
CDC42EP3-205ENST00000494083 LCE3BQ5TA77 95 aa3.61□□□□□ -1.83
CDC42EP3-205ENST00000494083 PRAMEF13Q5VWM6 474 aa3.61□□□□□ -1.83
CDC42EP3-205ENST00000494083 RICTORQ6R327 1708 aa3.61□□□□□ -1.83
CDC42EP3-205ENST00000494083 XRN1Q8IZH2 1706 aaKnown RBP3.61□□□□□ -1.83
CDC42EP3-205ENST00000494083 EMILIN2Q9BXX0 1053 aa3.61□□□□□ -1.83
CDC42EP3-205ENST00000494083 GZF1Q9H116 711 aaPredicted RBP3.61□□□□□ -1.83
CDC42EP3-205ENST00000494083 PDS5BQ9NTI5 1447 aa3.61□□□□□ -1.83
CDC42EP3-205ENST00000494083 ARID1BQ8NFD5 2236 aaPredicted RBP3.61□□□□□ -1.83
CDC42EP3-205ENST00000494083 FANCAO15360 1455 aa3.61□□□□□ -1.83
CDC42EP3-205ENST00000494083 ROCK2O75116 1388 aaKnown RBP3.61□□□□□ -1.83
CDC42EP3-205ENST00000494083 PARD3Q8TEW0 1356 aa3.61□□□□□ -1.83
CDC42EP3-205ENST00000494083 GRK4P32298 578 aa3.6□□□□□ -1.83
CDC42EP3-205ENST00000494083 AOC3Q16853 763 aa3.6□□□□□ -1.83
CDC42EP3-205ENST00000494083 BNC2Q6ZN30 1099 aaPredicted RBP3.6□□□□□ -1.83
CDC42EP3-205ENST00000494083 MIPEPQ99797 713 aa3.6□□□□□ -1.83
CDC42EP3-205ENST00000494083 COL3A1P02461 1466 aaPredicted RBP3.6□□□□□ -1.83
CDC42EP3-205ENST00000494083 PTPRTO14522 1441 aa3.6□□□□□ -1.83
CDC42EP3-205ENST00000494083 FANCGO15287 622 aa3.6□□□□□ -1.83
CDC42EP3-205ENST00000494083 PAPLNO95428 1278 aa3.6□□□□□ -1.83
CDC42EP3-205ENST00000494083 CYP8B1Q9UNU6 501 aa3.6□□□□□ -1.83
CDC42EP3-205ENST00000494083 ADGRL1O94910 1474 aa3.6□□□□□ -1.83
CDC42EP3-205ENST00000494083 C3P01024 1663 aa3.6□□□□□ -1.83
CDC42EP3-205ENST00000494083 GPATCH8Q9UKJ3 1502 aaKnown RBP3.6□□□□□ -1.83
CDC42EP3-205ENST00000494083 NRXN3Q9Y4C0 1643 aa3.6□□□□□ -1.83
CDC42EP3-205ENST00000494083 WASH4PA8MWX3 477 aa3.6□□□□□ -1.83
CDC42EP3-205ENST00000494083 PSMD2Q13200 908 aa3.6□□□□□ -1.83
CDC42EP3-205ENST00000494083 CYFIP1Q7L576 1253 aa3.6□□□□□ -1.83
CDC42EP3-205ENST00000494083 JARID2Q92833 1246 aaPredicted RBP3.6□□□□□ -1.83
CDC42EP3-205ENST00000494083 RNF114Q9Y508 228 aa3.6□□□□□ -1.83
CDC42EP3-205ENST00000494083 EFCAB6Q5THR3 1501 aa3.6□□□□□ -1.83
CDC42EP3-205ENST00000494083 ABCC3O15438 1527 aa3.59□□□□□ -1.83
CDC42EP3-205ENST00000494083 RNASE1P07998 156 aaKnown RBP3.59□□□□□ -1.83
CDC42EP3-205ENST00000494083 DAB2P98082 770 aa3.59□□□□□ -1.83
CDC42EP3-205ENST00000494083 AGMOQ6ZNB7 445 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms