RNA–Protein interactions for RNA: ENST00000494051.1

SSB-212, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 392 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-212ENST00000494051 ST14Q9Y5Y6 855 aa8.9□□□□□ -0.98
SSB-212ENST00000494051 PITPNM2Q9BZ72 1349 aa8.89□□□□□ -0.99
SSB-212ENST00000494051 NASPP49321 788 aaPredicted RBP8.89□□□□□ -0.99
SSB-212ENST00000494051 IKZF1Q13422 519 aa8.89□□□□□ -0.99
SSB-212ENST00000494051 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.89□□□□□ -0.99
SSB-212ENST00000494051 CAPN10Q9HC96 672 aa8.89□□□□□ -0.99
SSB-212ENST00000494051 ZSWIM5Q9P217 1185 aa8.89□□□□□ -0.99
SSB-212ENST00000494051 KCNH3Q9ULD8 1083 aa8.89□□□□□ -0.99
SSB-212ENST00000494051 PLCL1Q15111 1095 aa8.88□□□□□ -0.99
SSB-212ENST00000494051 ABI1Q8IZP0 508 aa8.88□□□□□ -0.99
SSB-212ENST00000494051 DTWD2Q8NBA8 298 aa8.88□□□□□ -0.99
SSB-212ENST00000494051 AGBL5Q8NDL9 886 aa8.88□□□□□ -0.99
SSB-212ENST00000494051 PIWIL2Q8TC59 973 aaKnown RBP8.88□□□□□ -0.99
SSB-212ENST00000494051 CPLX3Q8WVH0 158 aa8.88□□□□□ -0.99
SSB-212ENST00000494051 UBE2FQ969M7 185 aa8.88□□□□□ -0.99
SSB-212ENST00000494051 SLC9A7Q96T83 725 aa8.88□□□□□ -0.99
SSB-212ENST00000494051 ASPNQ9BXN1 380 aa8.88□□□□□ -0.99
SSB-212ENST00000494051 ATP13A1Q9HD20 1204 aa8.88□□□□□ -0.99
SSB-212ENST00000494051 COL17A1Q9UMD9 1497 aaPredicted RBP8.88□□□□□ -0.99
SSB-212ENST00000494051 TNFRSF10CO14798 259 aa8.87□□□□□ -0.99
SSB-212ENST00000494051 CLEC3AO75596 197 aa8.87□□□□□ -0.99
SSB-212ENST00000494051 RUFY4Q6ZNE9 571 aa8.87□□□□□ -0.99
SSB-212ENST00000494051 WFDC3Q8IUB2 231 aa8.87□□□□□ -0.99
SSB-212ENST00000494051 SEMA3GQ9NS98 782 aa8.87□□□□□ -0.99
SSB-212ENST00000494051 ACRP10323 421 aa8.86□□□□□ -0.99
SSB-212ENST00000494051 CCNFP41002 786 aa8.86□□□□□ -0.99
SSB-212ENST00000494051 EIF6P56537 245 aaKnown RBP8.86□□□□□ -0.99
SSB-212ENST00000494051 RNF4P78317 190 aa8.86□□□□□ -0.99
SSB-212ENST00000494051 GNL2Q13823 731 aaKnown RBP8.86□□□□□ -0.99
SSB-212ENST00000494051 ANGEL2Q5VTE6 544 aaKnown RBP8.86□□□□□ -0.99
SSB-212ENST00000494051 INTS3Q68E01 1043 aaKnown RBP8.86□□□□□ -0.99
SSB-212ENST00000494051 LSRQ86X29 649 aaPredicted RBP8.86□□□□□ -0.99
SSB-212ENST00000494051 RBBP8NLQ8NC74 664 aaPredicted RBP8.86□□□□□ -0.99
SSB-212ENST00000494051 SEC16BQ96JE7 1060 aa8.86□□□□□ -0.99
SSB-212ENST00000494051 ZNF512BQ96KM6 892 aaPredicted RBP8.86□□□□□ -0.99
SSB-212ENST00000494051 SLC6A18Q96N87 628 aa8.86□□□□□ -0.99
SSB-212ENST00000494051 TM9SF2Q99805 663 aa8.86□□□□□ -0.99
SSB-212ENST00000494051 SRRTQ9BXP5 876 aaKnown RBP8.86□□□□□ -0.99
SSB-212ENST00000494051 IGSF5Q9NSI5 407 aa8.86□□□□□ -0.99
SSB-212ENST00000494051 THAP5Q7Z6K1 395 aa8.85□□□□□ -0.99
SSB-212ENST00000494051 VPS37DQ86XT2 251 aa8.85□□□□□ -0.99
SSB-212ENST00000494051 TMEM192Q8IY95 271 aa8.85□□□□□ -0.99
SSB-212ENST00000494051 VWCEQ96DN2 955 aa8.85□□□□□ -0.99
SSB-212ENST00000494051 DUSP15Q9H1R2 295 aaPredicted RBP8.85□□□□□ -0.99
SSB-212ENST00000494051 GPATCH2Q9NW75 528 aa8.85□□□□□ -0.99
SSB-212ENST00000494051 WASH4PA8MWX3 477 aa8.84□□□□□ -0.99
SSB-212ENST00000494051 ZP2Q05996 745 aa8.84□□□□□ -0.99
SSB-212ENST00000494051 NBPF12Q5TAG4 269 aaPredicted RBP8.84□□□□□ -0.99
SSB-212ENST00000494051 PI4K2BQ8TCG2 481 aa8.84□□□□□ -0.99
SSB-212ENST00000494051 KRTAP4-9Q9BYQ8 210 aa8.84□□□□□ -0.99
SSB-212ENST00000494051 TRIT1Q9H3H1 467 aaKnown RBP8.84□□□□□ -0.99
SSB-212ENST00000494051 ATF4P18848 351 aaPredicted RBP8.83□□□□□ -1
SSB-212ENST00000494051 FUT4P22083 530 aa8.83□□□□□ -1
SSB-212ENST00000494051 GUCY2CP25092 1073 aa8.83□□□□□ -1
SSB-212ENST00000494051 DHRS1Q96LJ7 313 aa8.83□□□□□ -1
SSB-212ENST00000494051 GPR62Q9BZJ7 368 aa8.83□□□□□ -1
SSB-212ENST00000494051 MKRN2Q9H000 416 aaKnown RBP8.83□□□□□ -1
SSB-212ENST00000494051 CARS2Q9HA77 564 aaKnown RBP8.83□□□□□ -1
SSB-212ENST00000494051 PRDM7Q9NQW5 492 aa8.83□□□□□ -1
SSB-212ENST00000494051 TPP2P29144 1249 aaPredicted RBP8.82□□□□□ -1
SSB-212ENST00000494051 GIPRP48546 466 aa8.82□□□□□ -1
SSB-212ENST00000494051 CLEC16AQ2KHT3 1053 aa8.82□□□□□ -1
SSB-212ENST00000494051 TAB3Q8N5C8 712 aaPredicted RBP8.82□□□□□ -1
SSB-212ENST00000494051 ASCC2Q9H1I8 757 aaPredicted RBP8.82□□□□□ -1
SSB-212ENST00000494051 IRAK1P51617 712 aa8.81□□□□□ -1
SSB-212ENST00000494051 ZYXQ15942 572 aaKnown RBP8.81□□□□□ -1
SSB-212ENST00000494051 NBPF9Q3BBW0 867 aa8.81□□□□□ -1
SSB-212ENST00000494051 ZNF792Q3KQV3 632 aa8.81□□□□□ -1
SSB-212ENST00000494051 UNC5AQ6ZN44 842 aa8.81□□□□□ -1
SSB-212ENST00000494051 CREG2Q8IUH2 290 aa8.81□□□□□ -1
SSB-212ENST00000494051 ANAPC16Q96DE5 110 aa8.81□□□□□ -1
SSB-212ENST00000494051 KRTAP4-2Q9BYR5 136 aa8.81□□□□□ -1
SSB-212ENST00000494051 SUCOQ9UBS9 1254 aaKnown RBP8.81□□□□□ -1
SSB-212ENST00000494051 SHISA3A0PJX4 238 aa8.8□□□□□ -1
SSB-212ENST00000494051 SRFP11831 508 aa8.8□□□□□ -1
SSB-212ENST00000494051 NMIQ13287 307 aaPredicted RBP8.8□□□□□ -1
SSB-212ENST00000494051 PPP2R5EQ16537 467 aa8.8□□□□□ -1
SSB-212ENST00000494051 TMPRSS7Q7RTY8 843 aa8.8□□□□□ -1
SSB-212ENST00000494051 TSPYL5Q86VY4 417 aaPredicted RBP8.8□□□□□ -1
SSB-212ENST00000494051 OR6P1Q8NGX9 317 aa8.8□□□□□ -1
SSB-212ENST00000494051 SHDQ96IW2 340 aa8.8□□□□□ -1
SSB-212ENST00000494051 TINF2Q9BSI4 451 aa8.8□□□□□ -1
SSB-212ENST00000494051 FAM86C1Q9NVL1 165 aa8.8□□□□□ -1
SSB-212ENST00000494051 LMCD1Q9NZU5 365 aa8.8□□□□□ -1
SSB-212ENST00000494051 ADGRE2Q9UHX3 823 aa8.8□□□□□ -1
SSB-212ENST00000494051 ADAMTS6Q9UKP5 1117 aa8.8□□□□□ -1
SSB-212ENST00000494051 STRIP2Q9ULQ0 834 aa8.8□□□□□ -1
SSB-212ENST00000494051 SSBP05455 408 aaKnown RBP eCLIP8.79□□□□□ -1
SSB-212ENST00000494051 TDRD10Q5VZ19 366 aaKnown RBP8.79□□□□□ -1
SSB-212ENST00000494051 SLC23A3Q6PIS1 610 aa8.79□□□□□ -1
SSB-212ENST00000494051 TTC6Q86TZ1 520 aa8.79□□□□□ -1
SSB-212ENST00000494051 CCDC144CPQ8IYA2 1237 aa8.79□□□□□ -1
SSB-212ENST00000494051 MBNL3Q9NUK0 354 aaKnown RBP8.79□□□□□ -1
SSB-212ENST00000494051 DUSP13Q9UII6 198 aa8.79□□□□□ -1
SSB-212ENST00000494051 FBXL21Q9UKT6 434 aa8.79□□□□□ -1
SSB-212ENST00000494051 C9IYK1 514 aa8.78□□□□□ -1
SSB-212ENST00000494051 ESR1P03372 595 aa8.78□□□□□ -1
SSB-212ENST00000494051 RNASE1P07998 156 aaKnown RBP8.78□□□□□ -1
SSB-212ENST00000494051 LTKP29376 864 aa8.78□□□□□ -1
SSB-212ENST00000494051 DNAJA1P31689 397 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms