RNA–Protein interactions for RNA: ENST00000494019.5

RFC2-211, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-211ENST00000494019 VCPKMTQ9H867 229 aa11.94□□□□□ -0.5
RFC2-211ENST00000494019 IL17RBQ9NRM6 502 aa11.94□□□□□ -0.5
RFC2-211ENST00000494019 MTMR4Q9NYA4 1195 aa11.94□□□□□ -0.5
RFC2-211ENST00000494019 NYAP2Q9P242 653 aa11.94□□□□□ -0.5
RFC2-211ENST00000494019 CLIP2Q9UDT6 1046 aa11.94□□□□□ -0.5
RFC2-211ENST00000494019 STX8Q9UNK0 236 aa11.94□□□□□ -0.5
RFC2-211ENST00000494019 SLC45A1Q9Y2W3 748 aa11.94□□□□□ -0.5
RFC2-211ENST00000494019 TAF6LQ9Y6J9 622 aa11.94□□□□□ -0.5
RFC2-211ENST00000494019 PLXNB2O15031 1838 aa11.94□□□□□ -0.5
RFC2-211ENST00000494019 E7EWF7 191 aa11.93□□□□□ -0.5
RFC2-211ENST00000494019 SLC27A2O14975 620 aa11.93□□□□□ -0.5
RFC2-211ENST00000494019 OSBPP22059 807 aa11.93□□□□□ -0.5
RFC2-211ENST00000494019 TRDNQ13061 729 aa11.93□□□□□ -0.5
RFC2-211ENST00000494019 PPP4R3BQ5MIZ7 849 aa11.93□□□□□ -0.5
RFC2-211ENST00000494019 RNF20Q5VTR2 975 aa11.93□□□□□ -0.5
RFC2-211ENST00000494019 CREB3L3Q68CJ9 461 aa11.93□□□□□ -0.5
RFC2-211ENST00000494019 RALYLQ86SE5 291 aaKnown RBP11.93□□□□□ -0.5
RFC2-211ENST00000494019 NKX2-3Q8TAU0 364 aa11.93□□□□□ -0.5
RFC2-211ENST00000494019 LPAR1Q92633 364 aa11.93□□□□□ -0.5
RFC2-211ENST00000494019 ZKSCAN3Q9BRR0 538 aa11.93□□□□□ -0.5
RFC2-211ENST00000494019 TANGO6Q9C0B7 1094 aa11.93□□□□□ -0.5
RFC2-211ENST00000494019 RPAP3Q9H6T3 665 aaPredicted RBP11.93□□□□□ -0.5
RFC2-211ENST00000494019 ADGRA2Q96PE1 1338 aa11.92□□□□□ -0.5
RFC2-211ENST00000494019 GPR25O00155 361 aa11.92□□□□□ -0.5
RFC2-211ENST00000494019 WDR46O15213 610 aaKnown RBP11.92□□□□□ -0.5
RFC2-211ENST00000494019 TLR2O60603 784 aa11.92□□□□□ -0.5
RFC2-211ENST00000494019 NT5C2P49902 561 aa11.92□□□□□ -0.5
RFC2-211ENST00000494019 NECTIN1Q15223 517 aa11.92□□□□□ -0.5
RFC2-211ENST00000494019 KIAA1755Q5JYT7 1200 aa11.92□□□□□ -0.5
RFC2-211ENST00000494019 STOX1Q6ZVD7 989 aa11.92□□□□□ -0.5
RFC2-211ENST00000494019 IQCA1Q86XH1 822 aa11.92□□□□□ -0.5
RFC2-211ENST00000494019 NCOA7Q8NI08 942 aa11.92□□□□□ -0.5
RFC2-211ENST00000494019 ASCC2Q9H1I8 757 aaPredicted RBP11.92□□□□□ -0.5
RFC2-211ENST00000494019 TCP11L1Q9NUJ3 509 aa11.92□□□□□ -0.5
RFC2-211ENST00000494019 TNKSO95271 1327 aa11.91□□□□□ -0.5
RFC2-211ENST00000494019 USP17L15C9J2P7 530 aa11.91□□□□□ -0.5
RFC2-211ENST00000494019 USP17L13C9JLJ4 530 aa11.91□□□□□ -0.5
RFC2-211ENST00000494019 USP17L11C9JVI0 530 aa11.91□□□□□ -0.5
RFC2-211ENST00000494019 USP17L18D6R9N7 530 aa11.91□□□□□ -0.5
RFC2-211ENST00000494019 USP17L22D6RA61 530 aa11.91□□□□□ -0.5
RFC2-211ENST00000494019 USP17L17D6RBQ6 530 aa11.91□□□□□ -0.5
RFC2-211ENST00000494019 USP17L19D6RCP7 530 aa11.91□□□□□ -0.5
RFC2-211ENST00000494019 USP17L20D6RJB6 530 aa11.91□□□□□ -0.5
RFC2-211ENST00000494019 HOXA7P31268 230 aaPredicted RBP11.91□□□□□ -0.5
RFC2-211ENST00000494019 USP17L24Q0WX57 530 aa11.91□□□□□ -0.5
RFC2-211ENST00000494019 ZNF296Q8WUU4 475 aaPredicted RBP11.91□□□□□ -0.5
RFC2-211ENST00000494019 UBAC1Q9BSL1 405 aa11.91□□□□□ -0.5
RFC2-211ENST00000494019 ZSWIM5Q9P217 1185 aa11.91□□□□□ -0.5
RFC2-211ENST00000494019 CPA4Q9UI42 421 aa11.91□□□□□ -0.5
RFC2-211ENST00000494019 ISY1Q9ULR0 285 aaKnown RBP11.91□□□□□ -0.5
RFC2-211ENST00000494019 SYNPO2Q9UMS6 1093 aa11.91□□□□□ -0.5
RFC2-211ENST00000494019 MTMR7Q9Y216 660 aa11.91□□□□□ -0.5
RFC2-211ENST00000494019 DOCK3Q8IZD9 2030 aa11.91□□□□□ -0.5
RFC2-211ENST00000494019 RBBP6Q7Z6E9 1792 aaKnown RBP11.9□□□□□ -0.5
RFC2-211ENST00000494019 F5H6K3 240 aa11.9□□□□□ -0.5
RFC2-211ENST00000494019 NDUFB10O96000 172 aa11.9□□□□□ -0.5
RFC2-211ENST00000494019 HERVK_113P62684 666 aa11.9□□□□□ -0.5
RFC2-211ENST00000494019 KLRC3Q07444 240 aa11.9□□□□□ -0.5
RFC2-211ENST00000494019 CCDC178Q5BJE1 867 aa11.9□□□□□ -0.5
RFC2-211ENST00000494019 NOM1Q5C9Z4 860 aaKnown RBP11.9□□□□□ -0.5
RFC2-211ENST00000494019 FAM83BQ5T0W9 1011 aa11.9□□□□□ -0.5
RFC2-211ENST00000494019 SAMD1Q6SPF0 538 aaPredicted RBP11.9□□□□□ -0.5
RFC2-211ENST00000494019 CATSPERGQ6ZRH7 1159 aa11.9□□□□□ -0.5
RFC2-211ENST00000494019 CYB5R4Q7L1T6 521 aa11.9□□□□□ -0.5
RFC2-211ENST00000494019 GMCL1P1Q8NEA9 526 aa11.9□□□□□ -0.5
RFC2-211ENST00000494019 MKL1Q969V6 931 aa11.9□□□□□ -0.5
RFC2-211ENST00000494019 CHMP4CQ96CF2 233 aa11.9□□□□□ -0.5
RFC2-211ENST00000494019 ZSCAN10Q96SZ4 725 aaPredicted RBP11.9□□□□□ -0.5
RFC2-211ENST00000494019 NUP88Q99567 741 aaPredicted RBP11.9□□□□□ -0.5
RFC2-211ENST00000494019 PLXNA1Q9UIW2 1896 aa11.89□□□□□ -0.51
RFC2-211ENST00000494019 FKTNO75072 461 aa11.89□□□□□ -0.51
RFC2-211ENST00000494019 FLOT1O75955 427 aa11.89□□□□□ -0.51
RFC2-211ENST00000494019 TOP1P11387 765 aaKnown RBP11.89□□□□□ -0.51
RFC2-211ENST00000494019 ZKSCAN1P17029 563 aaPredicted RBP11.89□□□□□ -0.51
RFC2-211ENST00000494019 HSPA4P34932 840 aa11.89□□□□□ -0.51
RFC2-211ENST00000494019 GCLCP48506 637 aaPredicted RBP11.89□□□□□ -0.51
RFC2-211ENST00000494019 NOVP48745 357 aa11.89□□□□□ -0.51
RFC2-211ENST00000494019 SP3Q02447 781 aa11.89□□□□□ -0.51
RFC2-211ENST00000494019 SLFN13Q68D06 897 aa11.89□□□□□ -0.51
RFC2-211ENST00000494019 RCSD1Q6JBY9 416 aa11.89□□□□□ -0.51
RFC2-211ENST00000494019 C17orf99Q6UX52 265 aa11.89□□□□□ -0.51
RFC2-211ENST00000494019 RASGRP2Q7LDG7 609 aa11.89□□□□□ -0.51
RFC2-211ENST00000494019 CHST3Q7LGC8 479 aa11.89□□□□□ -0.51
RFC2-211ENST00000494019 MB21D2Q8IYB1 491 aaPredicted RBP11.89□□□□□ -0.51
RFC2-211ENST00000494019 ANKRD13CQ8N6S4 541 aa11.89□□□□□ -0.51
RFC2-211ENST00000494019 ENAHQ8N8S7 591 aaPredicted RBP11.89□□□□□ -0.51
RFC2-211ENST00000494019 TMEM47Q9BQJ4 181 aa11.89□□□□□ -0.51
RFC2-211ENST00000494019 PRDM10Q9NQV6 1147 aa11.89□□□□□ -0.51
RFC2-211ENST00000494019 ZNFX1Q9P2E3 1918 aaKnown RBP11.89□□□□□ -0.51
RFC2-211ENST00000494019 ERICH2A1L162 156 aa11.88□□□□□ -0.51
RFC2-211ENST00000494019 SPDYE16A6NNV3 312 aaPredicted RBP11.88□□□□□ -0.51
RFC2-211ENST00000494019 ECM2O94769 699 aaPredicted RBP11.88□□□□□ -0.51
RFC2-211ENST00000494019 BCRP11274 1271 aa11.88□□□□□ -0.51
RFC2-211ENST00000494019 SLC1A4P43007 532 aa11.88□□□□□ -0.51
RFC2-211ENST00000494019 SART3Q15020 963 aaKnown RBP11.88□□□□□ -0.51
RFC2-211ENST00000494019 FAM110CQ1W6H9 321 aa11.88□□□□□ -0.51
RFC2-211ENST00000494019 IFIT1BQ5T764 474 aaKnown RBP11.88□□□□□ -0.51
RFC2-211ENST00000494019 DGKHQ86XP1 1220 aa11.88□□□□□ -0.51
RFC2-211ENST00000494019 RASEFQ8IZ41 740 aa11.88□□□□□ -0.51
RFC2-211ENST00000494019 CD99L2Q8TCZ2 262 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms