RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 CELA2BP08218 269 aaPredicted RBP7.24□□□□□ -1.25
CPSF7-213ENST00000494016 ZAP70P43403 619 aa7.24□□□□□ -1.25
CPSF7-213ENST00000494016 NEK4P51957 841 aa7.24□□□□□ -1.25
CPSF7-213ENST00000494016 FKBP4Q02790 459 aaKnown RBP eCLIP7.24□□□□□ -1.25
CPSF7-213ENST00000494016 TFCP2Q12800 502 aa7.24□□□□□ -1.25
CPSF7-213ENST00000494016 TRIM28Q13263 835 aaKnown RBP7.24□□□□□ -1.25
CPSF7-213ENST00000494016 TCIRG1Q13488 830 aa7.24□□□□□ -1.25
CPSF7-213ENST00000494016 MTMR3Q13615 1198 aa7.24□□□□□ -1.25
CPSF7-213ENST00000494016 EZH2Q15910 746 aaKnown RBP7.24□□□□□ -1.25
CPSF7-213ENST00000494016 LMBR1LQ6UX01 489 aa7.24□□□□□ -1.25
CPSF7-213ENST00000494016 ATG9AQ7Z3C6 839 aa7.24□□□□□ -1.25
CPSF7-213ENST00000494016 GOLGA6L1Q8N7Z2 621 aa7.24□□□□□ -1.25
CPSF7-213ENST00000494016 CCDC191Q8NCU4 936 aa7.24□□□□□ -1.25
CPSF7-213ENST00000494016 KCNB2Q92953 911 aa7.24□□□□□ -1.25
CPSF7-213ENST00000494016 EVI5LQ96CN4 794 aa7.24□□□□□ -1.25
CPSF7-213ENST00000494016 TEX13AQ9BXU3 409 aaPredicted RBP7.24□□□□□ -1.25
CPSF7-213ENST00000494016 GSX2Q9BZM3 304 aa7.24□□□□□ -1.25
CPSF7-213ENST00000494016 ANO2Q9NQ90 1003 aa7.24□□□□□ -1.25
CPSF7-213ENST00000494016 LRRC4BQ9NT99 713 aa7.24□□□□□ -1.25
CPSF7-213ENST00000494016 CWC25Q9NXE8 425 aaPredicted RBP7.24□□□□□ -1.25
CPSF7-213ENST00000494016 PPP1R1BQ9UD71 204 aaPredicted RBP7.24□□□□□ -1.25
CPSF7-213ENST00000494016 KLF15Q9UIH9 416 aa7.24□□□□□ -1.25
CPSF7-213ENST00000494016 RTCBQ9Y3I0 505 aaKnown RBP7.24□□□□□ -1.25
CPSF7-213ENST00000494016 TRIM37O94972 964 aa7.23□□□□□ -1.25
CPSF7-213ENST00000494016 ABL1P00519 1130 aa7.23□□□□□ -1.25
CPSF7-213ENST00000494016 CYP2E1P05181 493 aaPredicted RBP7.23□□□□□ -1.25
CPSF7-213ENST00000494016 BCRP11274 1271 aa7.23□□□□□ -1.25
CPSF7-213ENST00000494016 CYP19A1P11511 503 aaPredicted RBP7.23□□□□□ -1.25
CPSF7-213ENST00000494016 ATP5JP18859 108 aa7.23□□□□□ -1.25
CPSF7-213ENST00000494016 MPSTP25325 297 aa7.23□□□□□ -1.25
CPSF7-213ENST00000494016 ADH6P28332 368 aa7.23□□□□□ -1.25
CPSF7-213ENST00000494016 SERPINB4P48594 390 aa7.23□□□□□ -1.25
CPSF7-213ENST00000494016 PTH1RQ03431 593 aa7.23□□□□□ -1.25
CPSF7-213ENST00000494016 CUL4AQ13619 759 aa7.23□□□□□ -1.25
CPSF7-213ENST00000494016 CWC27Q6UX04 472 aaKnown RBP7.23□□□□□ -1.25
CPSF7-213ENST00000494016 SLCO4C1Q6ZQN7 724 aa7.23□□□□□ -1.25
CPSF7-213ENST00000494016 CLEC17AQ6ZS10 378 aa7.23□□□□□ -1.25
CPSF7-213ENST00000494016 SVOPQ8N4V2 548 aa7.23□□□□□ -1.25
CPSF7-213ENST00000494016 UBE2Q2Q8WVN8 375 aa7.23□□□□□ -1.25
CPSF7-213ENST00000494016 EFCC1Q9HA90 598 aa7.23□□□□□ -1.25
CPSF7-213ENST00000494016 CWC22Q9HCG8 908 aaKnown RBP7.23□□□□□ -1.25
CPSF7-213ENST00000494016 FAM13BQ9NYF5 915 aa7.23□□□□□ -1.25
CPSF7-213ENST00000494016 GGA1Q9UJY5 639 aa7.23□□□□□ -1.25
CPSF7-213ENST00000494016 GNEQ9Y223 722 aaKnown RBP7.23□□□□□ -1.25
CPSF7-213ENST00000494016 ZDHHC9Q9Y397 364 aa7.23□□□□□ -1.25
CPSF7-213ENST00000494016 SNX14Q9Y5W7 946 aa7.23□□□□□ -1.25
CPSF7-213ENST00000494016 DOT1LQ8TEK3 1739 aa7.22□□□□□ -1.25
CPSF7-213ENST00000494016 BCL9O00512 1426 aa7.22□□□□□ -1.25
CPSF7-213ENST00000494016 OIP5O43482 229 aa7.22□□□□□ -1.25
CPSF7-213ENST00000494016 ICMTO60725 284 aa7.22□□□□□ -1.25
CPSF7-213ENST00000494016 SIN3BO75182 1162 aa7.22□□□□□ -1.25
CPSF7-213ENST00000494016 ARHGEF15O94989 841 aa7.22□□□□□ -1.25
CPSF7-213ENST00000494016 EGFRP00533 1210 aa7.22□□□□□ -1.25
CPSF7-213ENST00000494016 MCCP23508 829 aa7.22□□□□□ -1.25
CPSF7-213ENST00000494016 ZNF211Q13398 564 aaPredicted RBP7.22□□□□□ -1.25
CPSF7-213ENST00000494016 CCINQ13939 588 aa7.22□□□□□ -1.25
CPSF7-213ENST00000494016 HLFQ16534 295 aa7.22□□□□□ -1.25
CPSF7-213ENST00000494016 TNNI3KQ59H18 835 aa7.22□□□□□ -1.25
CPSF7-213ENST00000494016 NOM1Q5C9Z4 860 aaKnown RBP7.22□□□□□ -1.25
CPSF7-213ENST00000494016 PTF1AQ7RTS3 328 aa7.22□□□□□ -1.25
CPSF7-213ENST00000494016 SYT9Q86SS6 491 aa7.22□□□□□ -1.25
CPSF7-213ENST00000494016 RGL4Q8IZJ4 473 aa7.22□□□□□ -1.25
CPSF7-213ENST00000494016 ZGPATQ8N5A5 531 aaKnown RBP7.22□□□□□ -1.25
CPSF7-213ENST00000494016 GPATCH3Q96I76 525 aa7.22□□□□□ -1.25
CPSF7-213ENST00000494016 TMX3Q96JJ7 454 aa7.22□□□□□ -1.25
CPSF7-213ENST00000494016 CAMKK2Q96RR4 588 aa7.22□□□□□ -1.25
CPSF7-213ENST00000494016 BOLA2Q9H3K6 86 aa7.22□□□□□ -1.25
CPSF7-213ENST00000494016 DBNLQ9UJU6 430 aaKnown RBP7.22□□□□□ -1.25
CPSF7-213ENST00000494016 USP20Q9Y2K6 914 aa7.22□□□□□ -1.25
CPSF7-213ENST00000494016 KCNMB2Q9Y691 235 aa7.22□□□□□ -1.25
CPSF7-213ENST00000494016 FPGT-TNNI3KV9GXZ4 949 aa7.22□□□□□ -1.25
CPSF7-213ENST00000494016 CASZ1Q86V15 1759 aa7.22□□□□□ -1.25
CPSF7-213ENST00000494016 RAD50Q92878 1312 aa7.22□□□□□ -1.25
CPSF7-213ENST00000494016 BTAF1O14981 1849 aa7.22□□□□□ -1.25
CPSF7-213ENST00000494016 PATL2C9JE40 543 aaKnown RBP7.21□□□□□ -1.26
CPSF7-213ENST00000494016 FAM13AO94988 1023 aa7.21□□□□□ -1.26
CPSF7-213ENST00000494016 STARD3NLO95772 234 aa7.21□□□□□ -1.26
CPSF7-213ENST00000494016 PCCAP05165 728 aaPredicted RBP7.21□□□□□ -1.26
CPSF7-213ENST00000494016 CSF1RP07333 972 aa7.21□□□□□ -1.26
CPSF7-213ENST00000494016 HSP90AA1P07900 732 aaKnown RBP7.21□□□□□ -1.26
CPSF7-213ENST00000494016 EIF1AXP47813 144 aaKnown RBP7.21□□□□□ -1.26
CPSF7-213ENST00000494016 MCM2P49736 904 aa7.21□□□□□ -1.26
CPSF7-213ENST00000494016 MARSP56192 900 aaKnown RBP7.21□□□□□ -1.26
CPSF7-213ENST00000494016 PCBP4P57723 403 aaKnown RBP7.21□□□□□ -1.26
CPSF7-213ENST00000494016 NMIQ13287 307 aaPredicted RBP7.21□□□□□ -1.26
CPSF7-213ENST00000494016 NECTIN1Q15223 517 aa7.21□□□□□ -1.26
CPSF7-213ENST00000494016 ALKBH2Q6NS38 261 aa7.21□□□□□ -1.26
CPSF7-213ENST00000494016 C1orf229Q6ZS94 237 aaPredicted RBP7.21□□□□□ -1.26
CPSF7-213ENST00000494016 FCHSD1Q86WN1 690 aa7.21□□□□□ -1.26
CPSF7-213ENST00000494016 FAM177A1Q8N128 213 aaPredicted RBP7.21□□□□□ -1.26
CPSF7-213ENST00000494016 CMTR1Q8N1G2 835 aaKnown RBP7.21□□□□□ -1.26
CPSF7-213ENST00000494016 RUFY2Q8WXA3 655 aa7.21□□□□□ -1.26
CPSF7-213ENST00000494016 PIK3R5Q8WYR1 880 aa7.21□□□□□ -1.26
CPSF7-213ENST00000494016 MAP4K1Q92918 833 aa7.21□□□□□ -1.26
CPSF7-213ENST00000494016 FAM227BQ96M60 508 aa7.21□□□□□ -1.26
CPSF7-213ENST00000494016 TTC14Q96N46 770 aa7.21□□□□□ -1.26
CPSF7-213ENST00000494016 MDFIQ99750 246 aa7.21□□□□□ -1.26
CPSF7-213ENST00000494016 DBNDD2Q9BQY9 259 aa7.21□□□□□ -1.26
CPSF7-213ENST00000494016 GPR108Q9NPR9 543 aa7.21□□□□□ -1.26
CPSF7-213ENST00000494016 THRAP3Q9Y2W1 955 aaKnown RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms