RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 MKL2Q9ULH7 1088 aa8.71□□□□□ -1.01
SMC2-205ENST00000493955 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.71□□□□□ -1.02
SMC2-205ENST00000493955 A0A1W2PQU0 124 aa8.71□□□□□ -1.02
SMC2-205ENST00000493955 F8W735 103 aaPredicted RBP8.71□□□□□ -1.02
SMC2-205ENST00000493955 CBFA2T2O43439 604 aa8.71□□□□□ -1.02
SMC2-205ENST00000493955 MASP1P48740 699 aa8.71□□□□□ -1.02
SMC2-205ENST00000493955 PRRT3Q5FWE3 981 aa8.71□□□□□ -1.02
SMC2-205ENST00000493955 AGGF1Q8N302 714 aaeCLIP8.71□□□□□ -1.02
SMC2-205ENST00000493955 KLHL25Q9H0H3 589 aa8.71□□□□□ -1.02
SMC2-205ENST00000493955 ARHGEF4Q9NR80 690 aa8.71□□□□□ -1.02
SMC2-205ENST00000493955 PCOLCE2Q9UKZ9 415 aa8.71□□□□□ -1.02
SMC2-205ENST00000493955 DCAF15Q66K64 600 aa8.7□□□□□ -1.02
SMC2-205ENST00000493955 PPP1R13LQ8WUF5 828 aa8.7□□□□□ -1.02
SMC2-205ENST00000493955 SCARF2Q96GP6 870 aaPredicted RBP8.7□□□□□ -1.02
SMC2-205ENST00000493955 ZNF512BQ96KM6 892 aaPredicted RBP8.7□□□□□ -1.02
SMC2-205ENST00000493955 MKRN2Q9H000 416 aaKnown RBP8.7□□□□□ -1.02
SMC2-205ENST00000493955 GBP3Q9H0R5 595 aa8.7□□□□□ -1.02
SMC2-205ENST00000493955 LRP2BPQ9P2M1 347 aa8.7□□□□□ -1.02
SMC2-205ENST00000493955 RAB11FIP3O75154 756 aa8.69□□□□□ -1.02
SMC2-205ENST00000493955 PREPP48147 710 aa8.69□□□□□ -1.02
SMC2-205ENST00000493955 HSP90AA2PQ14568 343 aaPredicted RBP8.69□□□□□ -1.02
SMC2-205ENST00000493955 PPP1R14AQ96A00 147 aa8.69□□□□□ -1.02
SMC2-205ENST00000493955 CDC6Q99741 560 aa8.69□□□□□ -1.02
SMC2-205ENST00000493955 NOP53Q9NZM5 478 aaKnown RBP8.69□□□□□ -1.02
SMC2-205ENST00000493955 APEX2Q9UBZ4 518 aa8.69□□□□□ -1.02
SMC2-205ENST00000493955 TRAV20A0A0B4J274 112 aa8.68□□□□□ -1.02
SMC2-205ENST00000493955 VIL1P09327 827 aaKnown RBP8.68□□□□□ -1.02
SMC2-205ENST00000493955 RAB6AP20340 208 aa8.68□□□□□ -1.02
SMC2-205ENST00000493955 RNF4P78317 190 aa8.68□□□□□ -1.02
SMC2-205ENST00000493955 NBPF12Q5TAG4 269 aaPredicted RBP8.68□□□□□ -1.02
SMC2-205ENST00000493955 FOXB2Q5VYV0 432 aa8.68□□□□□ -1.02
SMC2-205ENST00000493955 SHISA2Q6UWI4 295 aa8.68□□□□□ -1.02
SMC2-205ENST00000493955 DNAJB8Q8NHS0 232 aa8.68□□□□□ -1.02
SMC2-205ENST00000493955 KISS1RQ969F8 398 aaPredicted RBP8.68□□□□□ -1.02
SMC2-205ENST00000493955 EXOC2Q96KP1 924 aa8.68□□□□□ -1.02
SMC2-205ENST00000493955 FGD4Q96M96 766 aa8.68□□□□□ -1.02
SMC2-205ENST00000493955 AARSD1Q9BTE6 412 aaKnown RBP8.68□□□□□ -1.02
SMC2-205ENST00000493955 CEP41Q9BYV8 373 aa8.68□□□□□ -1.02
SMC2-205ENST00000493955 ACSS3Q9H6R3 686 aa8.68□□□□□ -1.02
SMC2-205ENST00000493955 CEP131Q9UPN4 1083 aa8.68□□□□□ -1.02
SMC2-205ENST00000493955 GAS2O43903 313 aaKnown RBP8.67□□□□□ -1.02
SMC2-205ENST00000493955 ITGAVP06756 1048 aa8.67□□□□□ -1.02
SMC2-205ENST00000493955 L1CAMP32004 1257 aa8.67□□□□□ -1.02
SMC2-205ENST00000493955 PPP2R2AP63151 447 aa8.67□□□□□ -1.02
SMC2-205ENST00000493955 AMPD3Q01432 767 aa8.67□□□□□ -1.02
SMC2-205ENST00000493955 ANKRD39Q53RE8 183 aa8.67□□□□□ -1.02
SMC2-205ENST00000493955 ZNF227Q86WZ6 799 aa8.67□□□□□ -1.02
SMC2-205ENST00000493955 NIM1KQ8IY84 436 aa8.67□□□□□ -1.02
SMC2-205ENST00000493955 ZNF513Q8N8E2 541 aaPredicted RBP8.67□□□□□ -1.02
SMC2-205ENST00000493955 LRRN4CLQ8ND94 238 aa8.67□□□□□ -1.02
SMC2-205ENST00000493955 NINJ1Q92982 152 aa8.67□□□□□ -1.02
SMC2-205ENST00000493955 MFSD3Q96ES6 412 aa8.67□□□□□ -1.02
SMC2-205ENST00000493955 IPO9Q96P70 1041 aaKnown RBP8.67□□□□□ -1.02
SMC2-205ENST00000493955 MIPEPQ99797 713 aa8.67□□□□□ -1.02
SMC2-205ENST00000493955 DHRS4Q9BTZ2 278 aa8.67□□□□□ -1.02
SMC2-205ENST00000493955 AKTIPQ9H8T0 292 aa8.67□□□□□ -1.02
SMC2-205ENST00000493955 KRBA1A5PL33 1030 aa8.66□□□□□ -1.02
SMC2-205ENST00000493955 SART1O43290 800 aaKnown RBP8.66□□□□□ -1.02
SMC2-205ENST00000493955 PPM1BO75688 479 aa8.66□□□□□ -1.02
SMC2-205ENST00000493955 USP11P51784 963 aa8.66□□□□□ -1.02
SMC2-205ENST00000493955 GRIK4Q16099 956 aa8.66□□□□□ -1.02
SMC2-205ENST00000493955 C21orf62-AS1Q17RA5 79 aa8.66□□□□□ -1.02
SMC2-205ENST00000493955 LETMD1Q6P1Q0 360 aa8.66□□□□□ -1.02
SMC2-205ENST00000493955 ADAT2Q7Z6V5 191 aaKnown RBP8.66□□□□□ -1.02
SMC2-205ENST00000493955 C7orf61Q8IZ16 206 aa8.66□□□□□ -1.02
SMC2-205ENST00000493955 KREMEN1Q96MU8 473 aa8.66□□□□□ -1.02
SMC2-205ENST00000493955 NCOA5Q9HCD5 579 aaKnown RBP8.66□□□□□ -1.02
SMC2-205ENST00000493955 WHRNQ9P202 907 aa8.66□□□□□ -1.02
SMC2-205ENST00000493955 SUGT1Q9Y2Z0 365 aa8.66□□□□□ -1.02
SMC2-205ENST00000493955 MRPS23Q9Y3D9 190 aaKnown RBP8.66□□□□□ -1.02
SMC2-205ENST00000493955 DAGLAQ9Y4D2 1042 aa8.66□□□□□ -1.02
SMC2-205ENST00000493955 TRBV23-1A0A0A0MS06 115 aa8.65□□□□□ -1.02
SMC2-205ENST00000493955 RFPL3O75679 317 aa8.65□□□□□ -1.02
SMC2-205ENST00000493955 ALX3O95076 343 aa8.65□□□□□ -1.02
SMC2-205ENST00000493955 CD247P20963 164 aa8.65□□□□□ -1.02
SMC2-205ENST00000493955 PABPC4Q13310 644 aaKnown RBP eCLIP8.65□□□□□ -1.021e-6■□□□□ 9.5
SMC2-205ENST00000493955 AUHQ13825 339 aaKnown RBP8.65□□□□□ -1.02
SMC2-205ENST00000493955 TM4SF20Q53R12 229 aa8.65□□□□□ -1.02
SMC2-205ENST00000493955 FAM209AQ5JX71 171 aa8.65□□□□□ -1.02
SMC2-205ENST00000493955 YOD1Q5VVQ6 348 aaPredicted RBP8.65□□□□□ -1.02
SMC2-205ENST00000493955 Q6ZS46 218 aa8.65□□□□□ -1.02
SMC2-205ENST00000493955 RPUSD2Q8IZ73 545 aaKnown RBP8.65□□□□□ -1.02
SMC2-205ENST00000493955 YIPF2Q9BWQ6 316 aa8.65□□□□□ -1.02
SMC2-205ENST00000493955 USP21Q9UK80 565 aa8.65□□□□□ -1.02
SMC2-205ENST00000493955 ZNF451Q9Y4E5 1061 aa8.65□□□□□ -1.02
SMC2-205ENST00000493955 COL17A1Q9UMD9 1497 aaPredicted RBP8.65□□□□□ -1.03
SMC2-205ENST00000493955 PLD2O14939 933 aa8.64□□□□□ -1.03
SMC2-205ENST00000493955 SHOXO15266 292 aa8.64□□□□□ -1.03
SMC2-205ENST00000493955 ADAM23O75077 832 aa8.64□□□□□ -1.03
SMC2-205ENST00000493955 GLB1P16278 677 aa8.64□□□□□ -1.03
SMC2-205ENST00000493955 ETV3P41162 512 aa8.64□□□□□ -1.03
SMC2-205ENST00000493955 CBX2Q14781 532 aaPredicted RBP8.64□□□□□ -1.03
SMC2-205ENST00000493955 KRT26Q7Z3Y9 468 aa8.64□□□□□ -1.03
SMC2-205ENST00000493955 SCUBE1Q8IWY4 988 aa8.64□□□□□ -1.03
SMC2-205ENST00000493955 BVESQ8NE79 360 aa8.64□□□□□ -1.03
SMC2-205ENST00000493955 LENG1Q96BZ8 264 aaPredicted RBP8.64□□□□□ -1.03
SMC2-205ENST00000493955 VWCEQ96DN2 955 aa8.64□□□□□ -1.03
SMC2-205ENST00000493955 ASPNQ9BXN1 380 aa8.64□□□□□ -1.03
SMC2-205ENST00000493955 SEMA6CQ9H3T2 930 aa8.64□□□□□ -1.03
SMC2-205ENST00000493955 NOP56O00567 594 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms