RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 RFX7Q2KHR2 1363 aa12.51□□□□□ -0.41
PDLIM1-205ENST00000493949 CHD7Q9P2D1 2997 aa12.51□□□□□ -0.41
PDLIM1-205ENST00000493949 TRANK1O15050 2925 aa12.5□□□□□ -0.41
PDLIM1-205ENST00000493949 ENTPD3O75355 529 aa12.5□□□□□ -0.41
PDLIM1-205ENST00000493949 ZKSCAN1P17029 563 aaPredicted RBP12.5□□□□□ -0.41
PDLIM1-205ENST00000493949 RTP1P59025 263 aa12.5□□□□□ -0.41
PDLIM1-205ENST00000493949 LRRC24Q50LG9 513 aa12.5□□□□□ -0.41
PDLIM1-205ENST00000493949 VGLL2Q8N8G2 317 aa12.5□□□□□ -0.41
PDLIM1-205ENST00000493949 WDR66Q8TBY9 1149 aa12.5□□□□□ -0.41
PDLIM1-205ENST00000493949 SUCLG2Q96I99 432 aa12.5□□□□□ -0.41
PDLIM1-205ENST00000493949 UHRF1Q96T88 793 aaPredicted RBP12.5□□□□□ -0.41
PDLIM1-205ENST00000493949 ASCC2Q9H1I8 757 aaPredicted RBP12.5□□□□□ -0.41
PDLIM1-205ENST00000493949 C1orf115Q9H7X2 142 aa12.5□□□□□ -0.41
PDLIM1-205ENST00000493949 THEGQ9P2T0 379 aa12.5□□□□□ -0.41
PDLIM1-205ENST00000493949 ATP6V1DQ9Y5K8 247 aa12.5□□□□□ -0.41
PDLIM1-205ENST00000493949 LRRFIP2Q9Y608 721 aaKnown RBP12.5□□□□□ -0.41
PDLIM1-205ENST00000493949 PDE1AP54750 535 aa12.49□□□□□ -0.41
PDLIM1-205ENST00000493949 SNX17Q15036 470 aa12.49□□□□□ -0.41
PDLIM1-205ENST00000493949 SH3D19Q5HYK7 790 aa12.49□□□□□ -0.41
PDLIM1-205ENST00000493949 AKNAD1Q5T1N1 836 aa12.49□□□□□ -0.41
PDLIM1-205ENST00000493949 SH3BP5LQ7L8J4 393 aa12.49□□□□□ -0.41
PDLIM1-205ENST00000493949 SMAP1Q8IYB5 467 aaPredicted RBP12.49□□□□□ -0.41
PDLIM1-205ENST00000493949 GPT2Q8TD30 523 aa12.49□□□□□ -0.41
PDLIM1-205ENST00000493949 KIF12Q96FN5 646 aa12.49□□□□□ -0.41
PDLIM1-205ENST00000493949 USP40Q9NVE5 1235 aa12.49□□□□□ -0.41
PDLIM1-205ENST00000493949 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.49□□□□□ -0.41
PDLIM1-205ENST00000493949 GRM8O00222 908 aa12.48□□□□□ -0.41
PDLIM1-205ENST00000493949 DNM1LO00429 736 aa12.48□□□□□ -0.41
PDLIM1-205ENST00000493949 MSCO60682 206 aa12.48□□□□□ -0.41
PDLIM1-205ENST00000493949 PRPF40AO75400 957 aaKnown RBP12.48□□□□□ -0.41
PDLIM1-205ENST00000493949 PDE8BO95263 885 aa12.48□□□□□ -0.41
PDLIM1-205ENST00000493949 GNAI2P04899 355 aa12.48□□□□□ -0.41
PDLIM1-205ENST00000493949 GTF2F1P35269 517 aaKnown RBP eCLIP12.48□□□□□ -0.41
PDLIM1-205ENST00000493949 DIXDC1Q155Q3 683 aa12.48□□□□□ -0.41
PDLIM1-205ENST00000493949 MORN1Q5T089 497 aa12.48□□□□□ -0.41
PDLIM1-205ENST00000493949 ZNF280CQ8ND82 737 aa12.48□□□□□ -0.41
PDLIM1-205ENST00000493949 KLHDC4Q8TBB5 520 aa12.48□□□□□ -0.41
PDLIM1-205ENST00000493949 LPAR1Q92633 364 aa12.48□□□□□ -0.41
PDLIM1-205ENST00000493949 BADQ92934 168 aa12.48□□□□□ -0.41
PDLIM1-205ENST00000493949 ESYT1Q9BSJ8 1104 aa12.48□□□□□ -0.41
PDLIM1-205ENST00000493949 ZDHHC9Q9Y397 364 aa12.48□□□□□ -0.41
PDLIM1-205ENST00000493949 XIRP2A4UGR9 3374 aa12.47□□□□□ -0.41
PDLIM1-205ENST00000493949 PLXNA1Q9UIW2 1896 aa12.47□□□□□ -0.41
PDLIM1-205ENST00000493949 TBC1D12O60347 775 aa12.47□□□□□ -0.41
PDLIM1-205ENST00000493949 MAPK4P31152 587 aa12.47□□□□□ -0.41
PDLIM1-205ENST00000493949 RGS2P41220 211 aa12.47□□□□□ -0.41
PDLIM1-205ENST00000493949 MRPS5P82675 430 aaKnown RBP12.47□□□□□ -0.41
PDLIM1-205ENST00000493949 SPP2Q13103 211 aa12.47□□□□□ -0.41
PDLIM1-205ENST00000493949 CCL14Q16627 93 aa12.47□□□□□ -0.41
PDLIM1-205ENST00000493949 CCDC84Q86UT8 332 aaPredicted RBP12.47□□□□□ -0.41
PDLIM1-205ENST00000493949 TMX3Q96JJ7 454 aa12.47□□□□□ -0.41
PDLIM1-205ENST00000493949 APBA2Q99767 749 aa12.47□□□□□ -0.41
PDLIM1-205ENST00000493949 TMEM63CQ9P1W3 806 aa12.47□□□□□ -0.41
PDLIM1-205ENST00000493949 HCN4Q9Y3Q4 1203 aa12.47□□□□□ -0.41
PDLIM1-205ENST00000493949 UTYO14607 1347 aa12.46□□□□□ -0.41
PDLIM1-205ENST00000493949 UQCRHLA0A096LP55 91 aa12.46□□□□□ -0.41
PDLIM1-205ENST00000493949 DDTLA6NHG4 134 aaPredicted RBP12.46□□□□□ -0.41
PDLIM1-205ENST00000493949 RAB11FIP3O75154 756 aa12.46□□□□□ -0.41
PDLIM1-205ENST00000493949 UQCRHP07919 91 aa12.46□□□□□ -0.41
PDLIM1-205ENST00000493949 NBPF7P0C2Y1 421 aaPredicted RBP12.46□□□□□ -0.41
PDLIM1-205ENST00000493949 DNAJB2P25686 324 aa12.46□□□□□ -0.41
PDLIM1-205ENST00000493949 HOXA7P31268 230 aaPredicted RBP12.46□□□□□ -0.41
PDLIM1-205ENST00000493949 CCDC183Q5T5S1 534 aa12.46□□□□□ -0.41
PDLIM1-205ENST00000493949 LCE2DQ5TA82 110 aaPredicted RBP12.46□□□□□ -0.41
PDLIM1-205ENST00000493949 C1orf53Q5VUE5 145 aa12.46□□□□□ -0.41
PDLIM1-205ENST00000493949 SLC39A5Q6ZMH5 540 aa12.46□□□□□ -0.41
PDLIM1-205ENST00000493949 GPRC5AQ8NFJ5 357 aa12.46□□□□□ -0.41
PDLIM1-205ENST00000493949 LRRCC1Q9C099 1032 aa12.46□□□□□ -0.41
PDLIM1-205ENST00000493949 ZMYND15Q9H091 742 aa12.46□□□□□ -0.41
PDLIM1-205ENST00000493949 OSBPL5Q9H0X9 879 aaPredicted RBP12.46□□□□□ -0.41
PDLIM1-205ENST00000493949 ZNF576Q9H609 170 aa12.46□□□□□ -0.41
PDLIM1-205ENST00000493949 PDLIM7Q9NR12 457 aa12.46□□□□□ -0.41
PDLIM1-205ENST00000493949 BMP2KQ9NSY1 1161 aaPredicted RBP12.46□□□□□ -0.41
PDLIM1-205ENST00000493949 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.46□□□□□ -0.41
PDLIM1-205ENST00000493949 DDX20Q9UHI6 824 aaKnown RBP12.46□□□□□ -0.41
PDLIM1-205ENST00000493949 ATP11BQ9Y2G3 1177 aa12.46□□□□□ -0.41
PDLIM1-205ENST00000493949 TCHHQ07283 1943 aa12.46□□□□□ -0.42
PDLIM1-205ENST00000493949 FGFR2P21802 821 aa12.45□□□□□ -0.42
PDLIM1-205ENST00000493949 PRDX5P30044 214 aa12.45□□□□□ -0.42
PDLIM1-205ENST00000493949 HMGCS2P54868 508 aa12.45□□□□□ -0.42
PDLIM1-205ENST00000493949 SLC4A10Q6U841 1118 aa12.45□□□□□ -0.42
PDLIM1-205ENST00000493949 MYRIPQ8NFW9 859 aa12.45□□□□□ -0.42
PDLIM1-205ENST00000493949 PIBF1Q8WXW3 757 aa12.45□□□□□ -0.42
PDLIM1-205ENST00000493949 RNPC3Q96LT9 517 aaKnown RBP12.45□□□□□ -0.42
PDLIM1-205ENST00000493949 TXNRD2Q9NNW7 524 aa12.45□□□□□ -0.42
PDLIM1-205ENST00000493949 C9orf78Q9NZ63 289 aaPredicted RBP12.45□□□□□ -0.42
PDLIM1-205ENST00000493949 SALL1Q9NSC2 1324 aa12.44□□□□□ -0.42
PDLIM1-205ENST00000493949 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.44□□□□□ -0.42
PDLIM1-205ENST00000493949 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.44□□□□□ -0.42
PDLIM1-205ENST00000493949 TRIM43BA6NCK2 446 aa12.44□□□□□ -0.42
PDLIM1-205ENST00000493949 MX1P20591 662 aa12.44□□□□□ -0.42
PDLIM1-205ENST00000493949 NEK4P51957 841 aa12.44□□□□□ -0.42
PDLIM1-205ENST00000493949 HERVK_113P62684 666 aa12.44□□□□□ -0.42
PDLIM1-205ENST00000493949 METTL24Q5JXM2 366 aa12.44□□□□□ -0.42
PDLIM1-205ENST00000493949 POTEEQ6S8J3 1075 aa12.44□□□□□ -0.42
PDLIM1-205ENST00000493949 GPR142Q7Z601 462 aa12.44□□□□□ -0.42
PDLIM1-205ENST00000493949 TRIM43Q96BQ3 446 aaPredicted RBP12.44□□□□□ -0.42
PDLIM1-205ENST00000493949 SNX27Q96L92 541 aa12.44□□□□□ -0.42
PDLIM1-205ENST00000493949 GAS2L1Q99501 681 aaPredicted RBP12.44□□□□□ -0.42
PDLIM1-205ENST00000493949 P2RX7Q99572 595 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms