RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 BACE1P56817 501 aa12.4□□□□□ -0.42
TRAPPC12-222ENST00000493792 ATP2B2Q01814 1243 aa12.4□□□□□ -0.42
TRAPPC12-222ENST00000493792 VPS53Q5VIR6 699 aa12.4□□□□□ -0.42
TRAPPC12-222ENST00000493792 C16orf86Q6ZW13 317 aa12.4□□□□□ -0.42
TRAPPC12-222ENST00000493792 Q7L0L9 218 aa12.4□□□□□ -0.42
TRAPPC12-222ENST00000493792 DEFB123Q8N688 67 aa12.4□□□□□ -0.42
TRAPPC12-222ENST00000493792 PROCA1Q8NCQ7 364 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC12-222ENST00000493792 SMCR8Q8TEV9 937 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC12-222ENST00000493792 PAWRQ96IZ0 340 aaKnown RBP12.4□□□□□ -0.42
TRAPPC12-222ENST00000493792 CCDC17Q96LX7 622 aa12.4□□□□□ -0.42
TRAPPC12-222ENST00000493792 DEFB118Q96PH6 123 aa12.4□□□□□ -0.42
TRAPPC12-222ENST00000493792 WDR18Q9BV38 432 aa12.4□□□□□ -0.42
TRAPPC12-222ENST00000493792 MTMR10Q9NXD2 777 aa12.4□□□□□ -0.42
TRAPPC12-222ENST00000493792 AGTPBP1Q9UPW5 1226 aa12.4□□□□□ -0.42
TRAPPC12-222ENST00000493792 UNC80Q8N2C7 3258 aa12.4□□□□□ -0.42
TRAPPC12-222ENST00000493792 CCDC171Q6TFL3 1326 aa12.39□□□□□ -0.43
TRAPPC12-222ENST00000493792 C19orf81C9J6K1 198 aa12.39□□□□□ -0.43
TRAPPC12-222ENST00000493792 INHAP05111 366 aa12.39□□□□□ -0.43
TRAPPC12-222ENST00000493792 GSPT1P15170 499 aaKnown RBP12.39□□□□□ -0.43
TRAPPC12-222ENST00000493792 PABPC4Q13310 644 aaKnown RBP eCLIP12.39□□□□□ -0.43
TRAPPC12-222ENST00000493792 IRF5Q13568 498 aa12.39□□□□□ -0.43
TRAPPC12-222ENST00000493792 LRIT3Q3SXY7 679 aa12.39□□□□□ -0.43
TRAPPC12-222ENST00000493792 TREML2Q5T2D2 321 aa12.39□□□□□ -0.43
TRAPPC12-222ENST00000493792 TMEM179Q6ZVK1 233 aa12.39□□□□□ -0.43
TRAPPC12-222ENST00000493792 ZNF589Q86UQ0 364 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC12-222ENST00000493792 SKAP1Q86WV1 359 aa12.39□□□□□ -0.43
TRAPPC12-222ENST00000493792 COL25A1Q9BXS0 654 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC12-222ENST00000493792 ZNF287Q9HBT7 754 aa12.39□□□□□ -0.43
TRAPPC12-222ENST00000493792 PTPRFP10586 1907 aa12.39□□□□□ -0.43
TRAPPC12-222ENST00000493792 RAD21O60216 631 aa12.38□□□□□ -0.43
TRAPPC12-222ENST00000493792 PRDM1O75626 825 aa12.38□□□□□ -0.43
TRAPPC12-222ENST00000493792 IRX3P78415 501 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC12-222ENST00000493792 PDE4BQ07343 736 aa12.38□□□□□ -0.43
TRAPPC12-222ENST00000493792 PPARAQ07869 468 aa12.38□□□□□ -0.43
TRAPPC12-222ENST00000493792 USP17L2Q6R6M4 530 aa12.38□□□□□ -0.43
TRAPPC12-222ENST00000493792 TICAM2Q86XR7 235 aa12.38□□□□□ -0.43
TRAPPC12-222ENST00000493792 CLEC10AQ8IUN9 316 aa12.38□□□□□ -0.43
TRAPPC12-222ENST00000493792 ZNF444Q8N0Y2 327 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC12-222ENST00000493792 ACER1Q8TDN7 264 aa12.38□□□□□ -0.43
TRAPPC12-222ENST00000493792 DIS3LQ8TF46 1054 aaKnown RBP12.38□□□□□ -0.43
TRAPPC12-222ENST00000493792 ARHGEF10LQ9HCE6 1279 aa12.38□□□□□ -0.43
TRAPPC12-222ENST00000493792 TOMM22Q9NS69 142 aa12.38□□□□□ -0.43
TRAPPC12-222ENST00000493792 PNMA3Q9UL41 463 aa12.38□□□□□ -0.43
TRAPPC12-222ENST00000493792 TAOK2Q9UL54 1235 aa12.38□□□□□ -0.43
TRAPPC12-222ENST00000493792 VCANP13611 3396 aa12.37□□□□□ -0.43
TRAPPC12-222ENST00000493792 HSPD1P10809 573 aaKnown RBP12.37□□□□□ -0.43
TRAPPC12-222ENST00000493792 GUCY1A2P33402 732 aa12.37□□□□□ -0.43
TRAPPC12-222ENST00000493792 USP14P54578 494 aa12.37□□□□□ -0.43
TRAPPC12-222ENST00000493792 ICA1Q05084 483 aa12.37□□□□□ -0.43
TRAPPC12-222ENST00000493792 CTDSPL2Q05D32 466 aa12.37□□□□□ -0.43
TRAPPC12-222ENST00000493792 SH3D19Q5HYK7 790 aa12.37□□□□□ -0.43
TRAPPC12-222ENST00000493792 LOC285556D6RIA3 1793 aa12.36□□□□□ -0.43
TRAPPC12-222ENST00000493792 ROBO3Q96MS0 1386 aa12.36□□□□□ -0.43
TRAPPC12-222ENST00000493792 RASA1P20936 1047 aa12.36□□□□□ -0.43
TRAPPC12-222ENST00000493792 NECAB2Q7Z6G3 386 aa12.36□□□□□ -0.43
TRAPPC12-222ENST00000493792 RUFY2Q8WXA3 655 aa12.36□□□□□ -0.43
TRAPPC12-222ENST00000493792 KIAA1683Q9H0B3 1180 aa12.36□□□□□ -0.43
TRAPPC12-222ENST00000493792 ASCC2Q9H1I8 757 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC12-222ENST00000493792 SH2D4AQ9H788 454 aa12.36□□□□□ -0.43
TRAPPC12-222ENST00000493792 EMILIN3Q9NT22 766 aa12.36□□□□□ -0.43
TRAPPC12-222ENST00000493792 ZMYND8Q9ULU4 1186 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC12-222ENST00000493792 FOXP2O15409 715 aa12.35□□□□□ -0.43
TRAPPC12-222ENST00000493792 FGAP02671 866 aa12.35□□□□□ -0.43
TRAPPC12-222ENST00000493792 TSPY3P0CV98 308 aa12.35□□□□□ -0.43
TRAPPC12-222ENST00000493792 TSPY8P0CW00 308 aa12.35□□□□□ -0.43
TRAPPC12-222ENST00000493792 HAND2P61296 217 aa12.35□□□□□ -0.43
TRAPPC12-222ENST00000493792 FAM47AQ5JRC9 791 aa12.35□□□□□ -0.43
TRAPPC12-222ENST00000493792 RRP12Q5JTH9 1297 aaKnown RBP12.35□□□□□ -0.43
TRAPPC12-222ENST00000493792 SAMD1Q6SPF0 538 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC12-222ENST00000493792 KANSL2Q9H9L4 492 aa12.35□□□□□ -0.43
TRAPPC12-222ENST00000493792 A0A1W2PRG0 241 aa12.34□□□□□ -0.43
TRAPPC12-222ENST00000493792 TSPY2A6NKD2 308 aa12.34□□□□□ -0.43
TRAPPC12-222ENST00000493792 TNPO2O14787 897 aaKnown RBP12.34□□□□□ -0.43
TRAPPC12-222ENST00000493792 EEF2P13639 858 aaKnown RBP12.34□□□□□ -0.43
TRAPPC12-222ENST00000493792 VCAM1P19320 739 aa12.34□□□□□ -0.43
TRAPPC12-222ENST00000493792 CHMLP26374 656 aa12.34□□□□□ -0.43
TRAPPC12-222ENST00000493792 MAGEA10P43363 369 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC12-222ENST00000493792 ALX1Q15699 326 aa12.34□□□□□ -0.43
TRAPPC12-222ENST00000493792 C7orf61Q8IZ16 206 aa12.34□□□□□ -0.43
TRAPPC12-222ENST00000493792 SPICE1Q8N0Z3 855 aa12.34□□□□□ -0.43
TRAPPC12-222ENST00000493792 ANKRD13CQ8N6S4 541 aa12.34□□□□□ -0.43
TRAPPC12-222ENST00000493792 TANGO6Q9C0B7 1094 aa12.34□□□□□ -0.43
TRAPPC12-222ENST00000493792 INCENPQ9NQS7 918 aa12.34□□□□□ -0.43
TRAPPC12-222ENST00000493792 PPP4R2Q9NY27 417 aa12.34□□□□□ -0.43
TRAPPC12-222ENST00000493792 GJD2Q9UKL4 321 aa12.34□□□□□ -0.43
TRAPPC12-222ENST00000493792 USP17L15C9J2P7 530 aa12.33□□□□□ -0.44
TRAPPC12-222ENST00000493792 USP17L13C9JLJ4 530 aa12.33□□□□□ -0.44
TRAPPC12-222ENST00000493792 USP17L11C9JVI0 530 aa12.33□□□□□ -0.44
TRAPPC12-222ENST00000493792 USP17L18D6R9N7 530 aa12.33□□□□□ -0.44
TRAPPC12-222ENST00000493792 USP17L22D6RA61 530 aa12.33□□□□□ -0.44
TRAPPC12-222ENST00000493792 USP17L17D6RBQ6 530 aa12.33□□□□□ -0.44
TRAPPC12-222ENST00000493792 USP17L19D6RCP7 530 aa12.33□□□□□ -0.44
TRAPPC12-222ENST00000493792 USP17L20D6RJB6 530 aa12.33□□□□□ -0.44
TRAPPC12-222ENST00000493792 POTEB2H3BUK9 544 aa12.33□□□□□ -0.44
TRAPPC12-222ENST00000493792 RANBP6O60518 1105 aaKnown RBP12.33□□□□□ -0.44
TRAPPC12-222ENST00000493792 SYN1P17600 705 aa12.33□□□□□ -0.44
TRAPPC12-222ENST00000493792 TFAP4Q01664 338 aa12.33□□□□□ -0.44
TRAPPC12-222ENST00000493792 USP17L24Q0WX57 530 aa12.33□□□□□ -0.44
TRAPPC12-222ENST00000493792 TDHQ8IZJ6 230 aa12.33□□□□□ -0.44
TRAPPC12-222ENST00000493792 ANKLE1Q8NAG6 615 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms