RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 PRRT2Q7Z6L0 340 aaPredicted RBP13.75□□□□□ -0.21
CTSA-209ENST00000493522 RASA1P20936 1047 aa13.74□□□□□ -0.21
CTSA-209ENST00000493522 SEPT2Q15019 361 aa13.74□□□□□ -0.21
CTSA-209ENST00000493522 GADL1Q6ZQY3 521 aa13.74□□□□□ -0.21
CTSA-209ENST00000493522 TMEM179Q6ZVK1 233 aa13.74□□□□□ -0.21
CTSA-209ENST00000493522 UBE2Q1Q7Z7E8 422 aa13.74□□□□□ -0.21
CTSA-209ENST00000493522 ZNF280CQ8ND82 737 aa13.74□□□□□ -0.21
CTSA-209ENST00000493522 SMCR8Q8TEV9 937 aaPredicted RBP13.74□□□□□ -0.21
CTSA-209ENST00000493522 CCDC17Q96LX7 622 aa13.74□□□□□ -0.21
CTSA-209ENST00000493522 FEZ1Q99689 392 aa13.74□□□□□ -0.21
CTSA-209ENST00000493522 TBC1D2Q9BYX2 928 aa13.74□□□□□ -0.21
CTSA-209ENST00000493522 TOMM22Q9NS69 142 aa13.74□□□□□ -0.21
CTSA-209ENST00000493522 CTNNA3Q9UI47 895 aa13.74□□□□□ -0.21
CTSA-209ENST00000493522 SLC45A1Q9Y2W3 748 aa13.74□□□□□ -0.21
CTSA-209ENST00000493522 AFG3L2Q9Y4W6 797 aa13.74□□□□□ -0.21
CTSA-209ENST00000493522 GTF3C3Q9Y5Q9 886 aa13.74□□□□□ -0.21
CTSA-209ENST00000493522 NR2E3Q9Y5X4 410 aa13.74□□□□□ -0.21
CTSA-209ENST00000493522 TNPO2O14787 897 aaKnown RBP13.73□□□□□ -0.21
CTSA-209ENST00000493522 FARP2O94887 1054 aaPredicted RBP13.73□□□□□ -0.21
CTSA-209ENST00000493522 CAPN2P17655 700 aa13.73□□□□□ -0.21
CTSA-209ENST00000493522 PTH1RQ03431 593 aa13.73□□□□□ -0.21
CTSA-209ENST00000493522 SPP2Q13103 211 aa13.73□□□□□ -0.21
CTSA-209ENST00000493522 IMMTQ16891 758 aaKnown RBP13.73□□□□□ -0.21
CTSA-209ENST00000493522 RRP12Q5JTH9 1297 aaKnown RBP13.73□□□□□ -0.21
CTSA-209ENST00000493522 CLEC10AQ8IUN9 316 aa13.73□□□□□ -0.21
CTSA-209ENST00000493522 TBC1D10CQ8IV04 446 aa13.73□□□□□ -0.21
CTSA-209ENST00000493522 U2AF1L4Q8WU68 220 aaKnown RBP13.73□□□□□ -0.21
CTSA-209ENST00000493522 ANO2Q9NQ90 1003 aa13.73□□□□□ -0.21
CTSA-209ENST00000493522 RBM27Q9P2N5 1060 aaKnown RBP13.73□□□□□ -0.21
CTSA-209ENST00000493522 ANAPC4Q9UJX5 808 aa13.73□□□□□ -0.21
CTSA-209ENST00000493522 U3KPZ7 1027 aaPredicted RBP13.73□□□□□ -0.21
CTSA-209ENST00000493522 MGAMO43451 1857 aa13.73□□□□□ -0.21
CTSA-209ENST00000493522 ZNF213O14771 459 aa13.72□□□□□ -0.21
CTSA-209ENST00000493522 ADCY3O60266 1144 aa13.72□□□□□ -0.21
CTSA-209ENST00000493522 GUCY1A2P33402 732 aa13.72□□□□□ -0.21
CTSA-209ENST00000493522 FLT3LGP49771 235 aa13.72□□□□□ -0.21
CTSA-209ENST00000493522 ICA1Q05084 483 aa13.72□□□□□ -0.21
CTSA-209ENST00000493522 MTMR2Q13614 643 aa13.72□□□□□ -0.21
CTSA-209ENST00000493522 ZNF444Q8N0Y2 327 aaPredicted RBP13.72□□□□□ -0.21
CTSA-209ENST00000493522 WDR18Q9BV38 432 aa13.72□□□□□ -0.21
CTSA-209ENST00000493522 NBPF3Q9H094 633 aa13.72□□□□□ -0.21
CTSA-209ENST00000493522 GABRQQ9UN88 632 aa13.72□□□□□ -0.21
CTSA-209ENST00000493522 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.72□□□□□ -0.21
CTSA-209ENST00000493522 PLIN4Q96Q06 1357 aa13.71□□□□□ -0.21
CTSA-209ENST00000493522 COL11A1P12107 1806 aaPredicted RBP13.71□□□□□ -0.21
CTSA-209ENST00000493522 NEDD4P46934 1319 aa13.71□□□□□ -0.21
CTSA-209ENST00000493522 RANBP6O60518 1105 aaKnown RBP13.71□□□□□ -0.21
CTSA-209ENST00000493522 SGPL1O95470 568 aa13.71□□□□□ -0.21
CTSA-209ENST00000493522 TSPY3P0CV98 308 aa13.71□□□□□ -0.21
CTSA-209ENST00000493522 TSPY8P0CW00 308 aa13.71□□□□□ -0.21
CTSA-209ENST00000493522 HMGCS2P54868 508 aa13.71□□□□□ -0.21
CTSA-209ENST00000493522 ATP2B2Q01814 1243 aa13.71□□□□□ -0.21
CTSA-209ENST00000493522 ZYXQ15942 572 aaKnown RBP13.71□□□□□ -0.21
CTSA-209ENST00000493522 AKNAD1Q5T1N1 836 aa13.71□□□□□ -0.21
CTSA-209ENST00000493522 MFSD6Q6ZSS7 791 aa13.71□□□□□ -0.21
CTSA-209ENST00000493522 PXYLP1Q8TE99 480 aa13.71□□□□□ -0.21
CTSA-209ENST00000493522 LSG1Q9H089 658 aaKnown RBP13.71□□□□□ -0.21
CTSA-209ENST00000493522 UNC93B1Q9H1C4 597 aa13.71□□□□□ -0.21
CTSA-209ENST00000493522 RNF41Q9H4P4 317 aaPredicted RBP13.71□□□□□ -0.21
CTSA-209ENST00000493522 ARHGEF10LQ9HCE6 1279 aa13.71□□□□□ -0.21
CTSA-209ENST00000493522 INCENPQ9NQS7 918 aa13.71□□□□□ -0.21
CTSA-209ENST00000493522 PNMA3Q9UL41 463 aa13.71□□□□□ -0.21
CTSA-209ENST00000493522 RBM8AQ9Y5S9 174 aaKnown RBP13.71□□□□□ -0.21
CTSA-209ENST00000493522 A0A0G2JMZ2 1700 aa13.7□□□□□ -0.22
CTSA-209ENST00000493522 TSPY2A6NKD2 308 aa13.7□□□□□ -0.22
CTSA-209ENST00000493522 USP17L10C9JJH3 530 aa13.7□□□□□ -0.22
CTSA-209ENST00000493522 ORC4O43929 436 aa13.7□□□□□ -0.22
CTSA-209ENST00000493522 INHAP05111 366 aa13.7□□□□□ -0.22
CTSA-209ENST00000493522 IRF5Q13568 498 aa13.7□□□□□ -0.22
CTSA-209ENST00000493522 FAM47AQ5JRC9 791 aa13.7□□□□□ -0.22
CTSA-209ENST00000493522 ACER1Q8TDN7 264 aa13.7□□□□□ -0.22
CTSA-209ENST00000493522 STAG1Q8WVM7 1258 aa13.7□□□□□ -0.22
CTSA-209ENST00000493522 COA7Q96BR5 231 aa13.7□□□□□ -0.22
CTSA-209ENST00000493522 TMOD4Q9NZQ9 345 aa13.7□□□□□ -0.22
CTSA-209ENST00000493522 AGTPBP1Q9UPW5 1226 aa13.7□□□□□ -0.22
CTSA-209ENST00000493522 TACC3Q9Y6A5 838 aa13.7□□□□□ -0.22
CTSA-209ENST00000493522 RLFQ13129 1914 aa13.69□□□□□ -0.22
CTSA-209ENST00000493522 PCP11498 1178 aaKnown RBP13.69□□□□□ -0.22
CTSA-209ENST00000493522 ELNP15502 786 aa13.69□□□□□ -0.22
CTSA-209ENST00000493522 BACE1P56817 501 aa13.69□□□□□ -0.22
CTSA-209ENST00000493522 TFAP4Q01664 338 aa13.69□□□□□ -0.22
CTSA-209ENST00000493522 USP17L2Q6R6M4 530 aa13.69□□□□□ -0.22
CTSA-209ENST00000493522 MAP4K1Q92918 833 aa13.69□□□□□ -0.22
CTSA-209ENST00000493522 SH2D4AQ9H788 454 aa13.69□□□□□ -0.22
CTSA-209ENST00000493522 KANSL2Q9H9L4 492 aa13.69□□□□□ -0.22
CTSA-209ENST00000493522 COL6A3P12111 3177 aa13.69□□□□□ -0.22
CTSA-209ENST00000493522 MYH6P13533 1939 aa13.68□□□□□ -0.22
CTSA-209ENST00000493522 C19orf81C9J6K1 198 aa13.68□□□□□ -0.22
CTSA-209ENST00000493522 EVI5O60447 810 aa13.68□□□□□ -0.22
CTSA-209ENST00000493522 TFRCP02786 760 aaKnown RBP13.68□□□□□ -0.22
CTSA-209ENST00000493522 CYP21A2P08686 494 aa13.68□□□□□ -0.22
CTSA-209ENST00000493522 FGRP09769 529 aa13.68□□□□□ -0.22
CTSA-209ENST00000493522 EEF2P13639 858 aaKnown RBP13.68□□□□□ -0.22
CTSA-209ENST00000493522 USP14P54578 494 aa13.68□□□□□ -0.22
CTSA-209ENST00000493522 FAM110CQ1W6H9 321 aa13.68□□□□□ -0.22
CTSA-209ENST00000493522 ANKRD13CQ8N6S4 541 aa13.68□□□□□ -0.22
CTSA-209ENST00000493522 PROCA1Q8NCQ7 364 aaPredicted RBP13.68□□□□□ -0.22
CTSA-209ENST00000493522 NEDD1Q8NHV4 660 aa13.68□□□□□ -0.22
CTSA-209ENST00000493522 CEP95Q96GE4 821 aa13.68□□□□□ -0.22
CTSA-209ENST00000493522 DEFB118Q96PH6 123 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms