RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 SIAH1Q8IUQ4 282 aa13.54□□□□□ -0.24
LSM2-214ENST00000493387 GMCL1P1Q8NEA9 526 aa13.54□□□□□ -0.24
LSM2-214ENST00000493387 LPAR1Q92633 364 aa13.54□□□□□ -0.24
LSM2-214ENST00000493387 TMEM47Q9BQJ4 181 aa13.54□□□□□ -0.24
LSM2-214ENST00000493387 AGXT2Q9BYV1 514 aa13.54□□□□□ -0.24
LSM2-214ENST00000493387 LY9Q9HBG7 655 aa13.54□□□□□ -0.24
LSM2-214ENST00000493387 TMOD4Q9NZQ9 345 aa13.54□□□□□ -0.24
LSM2-214ENST00000493387 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.54□□□□□ -0.24
LSM2-214ENST00000493387 GREB1LQ9C091 1923 aaPredicted RBP13.54□□□□□ -0.24
LSM2-214ENST00000493387 TRIM75PA6NK02 468 aa13.53□□□□□ -0.24
LSM2-214ENST00000493387 IRF6O14896 467 aa13.53□□□□□ -0.24
LSM2-214ENST00000493387 SLC10A3P09131 477 aa13.53□□□□□ -0.24
LSM2-214ENST00000493387 CALM1P0DP23 149 aa13.53□□□□□ -0.24
LSM2-214ENST00000493387 CALM2P0DP24 149 aa13.53□□□□□ -0.24
LSM2-214ENST00000493387 CALM3P0DP25 149 aa13.53□□□□□ -0.24
LSM2-214ENST00000493387 RCAN1P53805 252 aa13.53□□□□□ -0.24
LSM2-214ENST00000493387 SH3D19Q5HYK7 790 aa13.53□□□□□ -0.24
LSM2-214ENST00000493387 FASTKD5Q7L8L6 764 aaKnown RBP13.53□□□□□ -0.24
LSM2-214ENST00000493387 RASAL3Q86YV0 1011 aa13.53□□□□□ -0.24
LSM2-214ENST00000493387 ACER1Q8TDN7 264 aa13.53□□□□□ -0.24
LSM2-214ENST00000493387 LRRC2Q9BYS8 371 aa13.53□□□□□ -0.24
LSM2-214ENST00000493387 VCPKMTQ9H867 229 aa13.53□□□□□ -0.24
LSM2-214ENST00000493387 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.53□□□□□ -0.24
LSM2-214ENST00000493387 SLC12A7Q9Y666 1083 aa13.53□□□□□ -0.24
LSM2-214ENST00000493387 ATAD5Q96QE3 1844 aa13.53□□□□□ -0.24
LSM2-214ENST00000493387 A0A0G2JLL6 359 aaPredicted RBP13.52□□□□□ -0.25
LSM2-214ENST00000493387 A0A1W2PRG0 241 aa13.52□□□□□ -0.25
LSM2-214ENST00000493387 MANSC4A6NHS7 340 aaPredicted RBP13.52□□□□□ -0.25
LSM2-214ENST00000493387 F5H6K3 240 aa13.52□□□□□ -0.25
LSM2-214ENST00000493387 DDAH1O94760 285 aa13.52□□□□□ -0.25
LSM2-214ENST00000493387 CETPP11597 493 aa13.52□□□□□ -0.25
LSM2-214ENST00000493387 HSPA6P17066 643 aa13.52□□□□□ -0.25
LSM2-214ENST00000493387 MCM2P49736 904 aa13.52□□□□□ -0.25
LSM2-214ENST00000493387 INHBEP58166 350 aa13.52□□□□□ -0.25
LSM2-214ENST00000493387 KLRC3Q07444 240 aa13.52□□□□□ -0.25
LSM2-214ENST00000493387 MTMR2Q13614 643 aa13.52□□□□□ -0.25
LSM2-214ENST00000493387 SLFN13Q68D06 897 aa13.52□□□□□ -0.25
LSM2-214ENST00000493387 PRRT2Q7Z6L0 340 aaPredicted RBP13.52□□□□□ -0.25
LSM2-214ENST00000493387 CCDC84Q86UT8 332 aaPredicted RBP13.52□□□□□ -0.25
LSM2-214ENST00000493387 CLEC10AQ8IUN9 316 aa13.52□□□□□ -0.25
LSM2-214ENST00000493387 REM2Q8IYK8 340 aaPredicted RBP13.52□□□□□ -0.25
LSM2-214ENST00000493387 PROCA1Q8NCQ7 364 aaPredicted RBP13.52□□□□□ -0.25
LSM2-214ENST00000493387 PNMA1Q8ND90 353 aa13.52□□□□□ -0.25
LSM2-214ENST00000493387 DCAF4Q8WV16 495 aa13.52□□□□□ -0.25
LSM2-214ENST00000493387 C12orf42Q96LP6 360 aa13.52□□□□□ -0.25
LSM2-214ENST00000493387 TCEANC2Q96MN5 208 aa13.52□□□□□ -0.25
LSM2-214ENST00000493387 MAP3K14Q99558 947 aa13.52□□□□□ -0.25
LSM2-214ENST00000493387 OTOFQ9HC10 1997 aa13.52□□□□□ -0.25
LSM2-214ENST00000493387 GJA5P36382 358 aa13.51□□□□□ -0.25
LSM2-214ENST00000493387 EVCP57679 992 aa13.51□□□□□ -0.25
LSM2-214ENST00000493387 NOGQ13253 232 aa13.51□□□□□ -0.25
LSM2-214ENST00000493387 COL9A3Q14050 684 aaPredicted RBP13.51□□□□□ -0.25
LSM2-214ENST00000493387 PPP2R5BQ15173 497 aa13.51□□□□□ -0.25
LSM2-214ENST00000493387 PAXIP1Q6ZW49 1069 aaPredicted RBP13.51□□□□□ -0.25
LSM2-214ENST00000493387 LRRC47Q8N1G4 583 aaKnown RBP13.51□□□□□ -0.25
LSM2-214ENST00000493387 BRF1Q92994 677 aa13.51□□□□□ -0.25
LSM2-214ENST00000493387 CHMP4CQ96CF2 233 aa13.51□□□□□ -0.25
LSM2-214ENST00000493387 GMCL1Q96IK5 515 aa13.51□□□□□ -0.25
LSM2-214ENST00000493387 WDR46O15213 610 aaKnown RBP13.5□□□□□ -0.25
LSM2-214ENST00000493387 NDUFB10O96000 172 aa13.5□□□□□ -0.25
LSM2-214ENST00000493387 KIF5BP33176 963 aa13.5□□□□□ -0.25
LSM2-214ENST00000493387 SLC1A4P43007 532 aa13.5□□□□□ -0.25
LSM2-214ENST00000493387 AK2P54819 239 aa13.5□□□□□ -0.25
LSM2-214ENST00000493387 HMGCS2P54868 508 aa13.5□□□□□ -0.25
LSM2-214ENST00000493387 PABPC4Q13310 644 aaKnown RBP eCLIP13.5□□□□□ -0.252e-7■■■■□ 25.3
LSM2-214ENST00000493387 TOB2Q14106 344 aaPredicted RBP13.5□□□□□ -0.25
LSM2-214ENST00000493387 ZNF654Q8IZM8 581 aa13.5□□□□□ -0.25
LSM2-214ENST00000493387 ZNF274Q96GC6 653 aaPredicted RBP13.5□□□□□ -0.25
LSM2-214ENST00000493387 CAPNS2Q96L46 248 aa13.5□□□□□ -0.25
LSM2-214ENST00000493387 ZSCAN31Q96LW9 406 aaPredicted RBP13.5□□□□□ -0.25
LSM2-214ENST00000493387 GPHNQ9NQX3 736 aaPredicted RBP13.5□□□□□ -0.25
LSM2-214ENST00000493387 EMILIN3Q9NT22 766 aa13.5□□□□□ -0.25
LSM2-214ENST00000493387 KLF18A0A0U1RQI7 1052 aa13.49□□□□□ -0.25
LSM2-214ENST00000493387 CCDC196A0A1B0GTZ2 297 aa13.49□□□□□ -0.25
LSM2-214ENST00000493387 TESPA1A2RU30 521 aaPredicted RBP13.49□□□□□ -0.25
LSM2-214ENST00000493387 FAM155AB1AL88 458 aaPredicted RBP13.49□□□□□ -0.25
LSM2-214ENST00000493387 ZBTB43O43298 467 aa13.49□□□□□ -0.25
LSM2-214ENST00000493387 RAD21O60216 631 aa13.49□□□□□ -0.25
LSM2-214ENST00000493387 PARP1P09874 1014 aaKnown RBP13.49□□□□□ -0.25
LSM2-214ENST00000493387 SNHG28P0DPA3 235 aa13.49□□□□□ -0.25
LSM2-214ENST00000493387 GNAQP50148 359 aa13.49□□□□□ -0.25
LSM2-214ENST00000493387 APOBRQ0VD83 1088 aa13.49□□□□□ -0.25
LSM2-214ENST00000493387 SREBF2Q12772 1141 aa13.49□□□□□ -0.25
LSM2-214ENST00000493387 TROAPQ12815 778 aa13.49□□□□□ -0.25
LSM2-214ENST00000493387 ZYXQ15942 572 aaKnown RBP13.49□□□□□ -0.25
LSM2-214ENST00000493387 ASPRV1Q53RT3 343 aa13.49□□□□□ -0.25
LSM2-214ENST00000493387 GPATCH4Q5T3I0 446 aaKnown RBP13.49□□□□□ -0.25
LSM2-214ENST00000493387 OTUD7BQ6GQQ9 843 aa13.49□□□□□ -0.25
LSM2-214ENST00000493387 APOA5Q6Q788 366 aa13.49□□□□□ -0.25
LSM2-214ENST00000493387 CTCFLQ8NI51 663 aaPredicted RBP13.49□□□□□ -0.25
LSM2-214ENST00000493387 MS4A4AQ96JQ5 239 aa13.49□□□□□ -0.25
LSM2-214ENST00000493387 SENP2Q9HC62 589 aa13.49□□□□□ -0.25
LSM2-214ENST00000493387 NAP1L2Q9ULW6 460 aaPredicted RBP13.49□□□□□ -0.25
LSM2-214ENST00000493387 LIMCH1Q9UPQ0 1083 aa13.49□□□□□ -0.25
LSM2-214ENST00000493387 SLC45A1Q9Y2W3 748 aa13.49□□□□□ -0.25
LSM2-214ENST00000493387 CCL15-CCL14A0A0B4J2E2 113 aa13.48□□□□□ -0.25
LSM2-214ENST00000493387 USP17L15C9J2P7 530 aa13.48□□□□□ -0.25
LSM2-214ENST00000493387 USP17L13C9JLJ4 530 aa13.48□□□□□ -0.25
LSM2-214ENST00000493387 USP17L11C9JVI0 530 aa13.48□□□□□ -0.25
LSM2-214ENST00000493387 USP17L18D6R9N7 530 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms