RNA–Protein interactions for RNA: ENST00000493256.1

LYSMD4-208, Transcript of LysM domain containing 4, humanhuman

TSL 3

Gene LYSMD4, Length 880 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-208ENST00000493256 MAP2K5Q13163 448 aa26.65■■□□□ 1.86
LYSMD4-208ENST00000493256 WDR78Q5VTH9 848 aa26.65■■□□□ 1.86
LYSMD4-208ENST00000493256 C16orf86Q6ZW13 317 aa26.65■■□□□ 1.86
LYSMD4-208ENST00000493256 NECAB2Q7Z6G3 386 aa26.65■■□□□ 1.86
LYSMD4-208ENST00000493256 AMOTL1Q8IY63 956 aa26.65■■□□□ 1.86
LYSMD4-208ENST00000493256 TANGO6Q9C0B7 1094 aa26.65■■□□□ 1.86
LYSMD4-208ENST00000493256 PCDH10Q9P2E7 1040 aa26.65■■□□□ 1.86
LYSMD4-208ENST00000493256 RLFQ13129 1914 aa26.65■■□□□ 1.86
LYSMD4-208ENST00000493256 ALPK3Q96L96 1907 aa26.65■■□□□ 1.86
LYSMD4-208ENST00000493256 GLRX3O76003 335 aaKnown RBP26.64■■□□□ 1.86
LYSMD4-208ENST00000493256 ICA1Q05084 483 aa26.64■■□□□ 1.86
LYSMD4-208ENST00000493256 COG2Q14746 738 aa26.64■■□□□ 1.86
LYSMD4-208ENST00000493256 CTR9Q6PD62 1173 aa26.64■■□□□ 1.86
LYSMD4-208ENST00000493256 KBTBD3Q8NAB2 608 aa26.64■■□□□ 1.86
LYSMD4-208ENST00000493256 GPATCH3Q96I76 525 aa26.64■■□□□ 1.86
LYSMD4-208ENST00000493256 CCDC17Q96LX7 622 aa26.64■■□□□ 1.86
LYSMD4-208ENST00000493256 SLC15A5A6NIM6 579 aa26.63■■□□□ 1.85
LYSMD4-208ENST00000493256 EVI5O60447 810 aa26.63■■□□□ 1.85
LYSMD4-208ENST00000493256 PTPREP23469 700 aa26.63■■□□□ 1.85
LYSMD4-208ENST00000493256 MNX1P50219 401 aaPredicted RBP26.63■■□□□ 1.85
LYSMD4-208ENST00000493256 STRBPQ96SI9 672 aaKnown RBP26.63■■□□□ 1.85
LYSMD4-208ENST00000493256 ARHGEF10LQ9HCE6 1279 aa26.63■■□□□ 1.85
LYSMD4-208ENST00000493256 OGDHLQ9ULD0 1010 aa26.63■■□□□ 1.85
LYSMD4-208ENST00000493256 TMX2Q9Y320 296 aa26.63■■□□□ 1.85
LYSMD4-208ENST00000493256 LPAR1Q92633 364 aa26.62■■□□□ 1.85
LYSMD4-208ENST00000493256 HOXC10Q9NYD6 342 aa26.62■■□□□ 1.85
LYSMD4-208ENST00000493256 PCDHB15Q9Y5E8 787 aa26.62■■□□□ 1.85
LYSMD4-208ENST00000493256 A0A0G2JMZ2 1700 aa26.62■■□□□ 1.85
LYSMD4-208ENST00000493256 CCND3P30281 292 aaPredicted RBP26.61■■□□□ 1.85
LYSMD4-208ENST00000493256 GRB14Q14449 540 aa26.61■■□□□ 1.85
LYSMD4-208ENST00000493256 SPICE1Q8N0Z3 855 aa26.61■■□□□ 1.85
LYSMD4-208ENST00000493256 OSBP2Q969R2 916 aa26.61■■□□□ 1.85
LYSMD4-208ENST00000493256 RBM27Q9P2N5 1060 aaKnown RBP26.61■■□□□ 1.85
LYSMD4-208ENST00000493256 MOV10L1Q9BXT6 1211 aaKnown RBP26.6■■□□□ 1.85
LYSMD4-208ENST00000493256 NBPF3Q9H094 633 aa26.6■■□□□ 1.85
LYSMD4-208ENST00000493256 SH2D4AQ9H788 454 aa26.6■■□□□ 1.85
LYSMD4-208ENST00000493256 VCPKMTQ9H867 229 aa26.6■■□□□ 1.85
LYSMD4-208ENST00000493256 FLRT1Q9NZU1 646 aa26.6■■□□□ 1.85
LYSMD4-208ENST00000493256 ARPP21Q9UBL0 812 aaPredicted RBP26.6■■□□□ 1.85
LYSMD4-208ENST00000493256 IVNS1ABPQ9Y6Y0 642 aa26.6■■□□□ 1.85
LYSMD4-208ENST00000493256 APPBP2Q92624 585 aa26.59■■□□□ 1.85
LYSMD4-208ENST00000493256 GSG1L2A8MUP6 293 aa26.58■■□□□ 1.85
LYSMD4-208ENST00000493256 RNF113AO15541 343 aaKnown RBP26.58■■□□□ 1.85
LYSMD4-208ENST00000493256 FLOT1O75955 427 aa26.58■■□□□ 1.85
LYSMD4-208ENST00000493256 HOXC6P09630 235 aa26.58■■□□□ 1.85
LYSMD4-208ENST00000493256 DSG3P32926 999 aa26.58■■□□□ 1.85
LYSMD4-208ENST00000493256 SPATC1LQ9H0A9 340 aa26.58■■□□□ 1.85
LYSMD4-208ENST00000493256 PRO3102Q9H379 93 aa26.58■■□□□ 1.85
LYSMD4-208ENST00000493256 PARP14Q460N5 1801 aa26.58■■□□□ 1.84
LYSMD4-208ENST00000493256 EEF2P13639 858 aaKnown RBP26.57■■□□□ 1.84
LYSMD4-208ENST00000493256 ATP2B2Q01814 1243 aa26.57■■□□□ 1.84
LYSMD4-208ENST00000493256 SBK1Q52WX2 424 aa26.57■■□□□ 1.84
LYSMD4-208ENST00000493256 MFSD14CQ5VZR4 134 aa26.57■■□□□ 1.84
LYSMD4-208ENST00000493256 LHX8Q68G74 356 aa26.57■■□□□ 1.84
LYSMD4-208ENST00000493256 MB21D1Q8N884 522 aa26.57■■□□□ 1.84
LYSMD4-208ENST00000493256 NPLOC4Q8TAT6 608 aa26.57■■□□□ 1.84
LYSMD4-208ENST00000493256 ATG4CQ96DT6 458 aa26.57■■□□□ 1.84
LYSMD4-208ENST00000493256 C11orf49Q9H6J7 331 aa26.57■■□□□ 1.84
LYSMD4-208ENST00000493256 KANSL2Q9H9L4 492 aa26.57■■□□□ 1.84
LYSMD4-208ENST00000493256 ZNF236Q9UL36 1845 aa26.56■■□□□ 1.84
LYSMD4-208ENST00000493256 WDR46O15213 610 aaKnown RBP26.56■■□□□ 1.84
LYSMD4-208ENST00000493256 ZFYP08048 801 aaPredicted RBP26.56■■□□□ 1.84
LYSMD4-208ENST00000493256 GIMAP6Q6P9H5 292 aa26.56■■□□□ 1.84
LYSMD4-208ENST00000493256 GREB1LQ9C091 1923 aaPredicted RBP26.55■■□□□ 1.84
LYSMD4-208ENST00000493256 GPAA1O43292 621 aa26.55■■□□□ 1.84
LYSMD4-208ENST00000493256 ERCC3P19447 782 aa26.55■■□□□ 1.84
LYSMD4-208ENST00000493256 RRP1P56182 461 aaKnown RBP26.55■■□□□ 1.84
LYSMD4-208ENST00000493256 SHCBP1Q8NEM2 672 aa26.55■■□□□ 1.84
LYSMD4-208ENST00000493256 OTUD7AQ8TE49 926 aaPredicted RBP26.55■■□□□ 1.84
LYSMD4-208ENST00000493256 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.55■■□□□ 1.84
LYSMD4-208ENST00000493256 EPB41L4AQ9HCS5 686 aaPredicted RBP26.55■■□□□ 1.84
LYSMD4-208ENST00000493256 TTC41PQ6P2S7 1318 aa26.55■■□□□ 1.84
LYSMD4-208ENST00000493256 FRMPD3Q5JV73 1810 aa26.54■■□□□ 1.84
LYSMD4-208ENST00000493256 M0R2C6 588 aa26.54■■□□□ 1.84
LYSMD4-208ENST00000493256 ADORA2AP29274 412 aa26.54■■□□□ 1.84
LYSMD4-208ENST00000493256 SAMD1Q6SPF0 538 aaPredicted RBP26.54■■□□□ 1.84
LYSMD4-208ENST00000493256 C7orf61Q8IZ16 206 aa26.54■■□□□ 1.84
LYSMD4-208ENST00000493256 STK11IPQ8N1F8 1099 aa26.54■■□□□ 1.84
LYSMD4-208ENST00000493256 PI4K2BQ8TCG2 481 aa26.54■■□□□ 1.84
LYSMD4-208ENST00000493256 PFASO15067 1338 aa26.54■■□□□ 1.84
LYSMD4-208ENST00000493256 ROBO3Q96MS0 1386 aa26.54■■□□□ 1.84
LYSMD4-208ENST00000493256 RASA1P20936 1047 aa26.53■■□□□ 1.84
LYSMD4-208ENST00000493256 PLS1Q14651 629 aa26.53■■□□□ 1.84
LYSMD4-208ENST00000493256 MINDY4BA8MYZ0 360 aa26.52■■□□□ 1.84
LYSMD4-208ENST00000493256 STRNO43815 780 aa26.52■■□□□ 1.84
LYSMD4-208ENST00000493256 IGHA2P01877 340 aa26.52■■□□□ 1.84
LYSMD4-208ENST00000493256 CYP2C19P33261 490 aa26.52■■□□□ 1.84
LYSMD4-208ENST00000493256 DPP9Q86TI2 863 aa26.52■■□□□ 1.84
LYSMD4-208ENST00000493256 GOPCQ9HD26 462 aa26.52■■□□□ 1.84
LYSMD4-208ENST00000493256 FBXO28Q9NVF7 368 aa26.52■■□□□ 1.84
LYSMD4-208ENST00000493256 ERC2O15083 957 aa26.51■■□□□ 1.83
LYSMD4-208ENST00000493256 COL6A1P12109 1028 aa26.51■■□□□ 1.83
LYSMD4-208ENST00000493256 GNAT2P19087 354 aa26.51■■□□□ 1.83
LYSMD4-208ENST00000493256 TMEM132BQ14DG7 1078 aa26.51■■□□□ 1.83
LYSMD4-208ENST00000493256 NCAPG2Q86XI2 1143 aa26.51■■□□□ 1.83
LYSMD4-208ENST00000493256 MROH8Q9H579 483 aa26.51■■□□□ 1.83
LYSMD4-208ENST00000493256 MKNK2Q9HBH9 465 aa26.51■■□□□ 1.83
LYSMD4-208ENST00000493256 COL11A1P12107 1806 aaPredicted RBP26.51■■□□□ 1.83
LYSMD4-208ENST00000493256 TDO2P48775 406 aa26.5■■□□□ 1.83
LYSMD4-208ENST00000493256 LRRFIP1Q32MZ4 808 aaKnown RBP26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms