RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.08□□□□□ -0.96
TPR-208ENST00000492973 WFDC12Q8WWY7 111 aa9.08□□□□□ -0.96
TPR-208ENST00000492973 SRCIN1Q9C0H9 1055 aa9.08□□□□□ -0.96
TPR-208ENST00000492973 MEGF6O75095 1541 aa9.08□□□□□ -0.96
TPR-208ENST00000492973 RGPD5Q99666 1765 aa9.08□□□□□ -0.96
TPR-208ENST00000492973 MAP2P11137 1827 aaKnown RBP9.08□□□□□ -0.96
TPR-208ENST00000492973 U2SURPO15042 1029 aaKnown RBP9.07□□□□□ -0.96
TPR-208ENST00000492973 XRCC5P13010 732 aaKnown RBP9.07□□□□□ -0.96
TPR-208ENST00000492973 NOS3P29474 1203 aa9.07□□□□□ -0.96
TPR-208ENST00000492973 FCGRTP55899 365 aa9.07□□□□□ -0.96
TPR-208ENST00000492973 C3orf58Q8NDZ4 430 aa9.07□□□□□ -0.96
TPR-208ENST00000492973 PNISRQ8TF01 805 aaKnown RBP9.07□□□□□ -0.96
TPR-208ENST00000492973 UBASH3BQ8TF42 649 aa9.07□□□□□ -0.96
TPR-208ENST00000492973 NRSN2Q9GZP1 204 aa9.07□□□□□ -0.96
TPR-208ENST00000492973 PPP4R2Q9NY27 417 aa9.07□□□□□ -0.96
TPR-208ENST00000492973 SPG7Q9UQ90 795 aa9.07□□□□□ -0.96
TPR-208ENST00000492973 KDRP35968 1356 aa9.07□□□□□ -0.96
TPR-208ENST00000492973 FAM208AQ9UK61 1670 aaKnown RBP9.07□□□□□ -0.96
TPR-208ENST00000492973 THSD7AQ9UPZ6 1657 aa9.07□□□□□ -0.96
TPR-208ENST00000492973 OVOS2A0A0G2JMS6 1433 aa9.06□□□□□ -0.96
TPR-208ENST00000492973 HMOX1P09601 288 aa9.06□□□□□ -0.96
TPR-208ENST00000492973 NLRP12P59046 1061 aa9.06□□□□□ -0.96
TPR-208ENST00000492973 FGD1P98174 961 aa9.06□□□□□ -0.96
TPR-208ENST00000492973 FAAP100Q0VG06 881 aa9.06□□□□□ -0.96
TPR-208ENST00000492973 DDB1Q16531 1140 aa9.06□□□□□ -0.96
TPR-208ENST00000492973 DTHD1Q6ZMT9 781 aa9.06□□□□□ -0.96
TPR-208ENST00000492973 Q6ZS46 218 aa9.06□□□□□ -0.96
TPR-208ENST00000492973 KIAA1211Q6ZU35 1233 aa9.06□□□□□ -0.96
TPR-208ENST00000492973 MARCH10Q8NA82 808 aaPredicted RBP9.06□□□□□ -0.96
TPR-208ENST00000492973 RAPGEF4Q8WZA2 1011 aa9.06□□□□□ -0.96
TPR-208ENST00000492973 FRMD6Q96NE9 622 aa9.06□□□□□ -0.96
TPR-208ENST00000492973 SSBP4Q9BWG4 385 aaPredicted RBP9.06□□□□□ -0.96
TPR-208ENST00000492973 AKTIPQ9H8T0 292 aa9.06□□□□□ -0.96
TPR-208ENST00000492973 NUDCQ9Y266 331 aa9.06□□□□□ -0.96
TPR-208ENST00000492973 EXOC5O00471 708 aa9.05□□□□□ -0.96
TPR-208ENST00000492973 U2AF1L5P0DN76 240 aaPredicted RBP9.05□□□□□ -0.96
TPR-208ENST00000492973 GNA15P30679 374 aa9.05□□□□□ -0.96
TPR-208ENST00000492973 IREB2P48200 963 aaKnown RBP9.05□□□□□ -0.96
TPR-208ENST00000492973 U2AF1Q01081 240 aaKnown RBP eCLIP9.05□□□□□ -0.96
TPR-208ENST00000492973 DUOXA2Q1HG44 320 aa9.05□□□□□ -0.96
TPR-208ENST00000492973 KRT27Q7Z3Y8 459 aa9.05□□□□□ -0.96
TPR-208ENST00000492973 FAM9BQ8IZU0 186 aa9.05□□□□□ -0.96
TPR-208ENST00000492973 ZCRB1Q8TBF4 217 aaKnown RBP9.05□□□□□ -0.96
TPR-208ENST00000492973 DUSP9Q99956 384 aaKnown RBP9.05□□□□□ -0.96
TPR-208ENST00000492973 C12orf49Q9H741 205 aa9.05□□□□□ -0.96
TPR-208ENST00000492973 ZFYVE1Q9HBF4 777 aa9.05□□□□□ -0.96
TPR-208ENST00000492973 RNF19AQ9NV58 838 aa9.05□□□□□ -0.96
TPR-208ENST00000492973 TNS2Q63HR2 1409 aa9.05□□□□□ -0.96
TPR-208ENST00000492973 EIF4EBP3O60516 100 aaPredicted RBP9.04□□□□□ -0.96
TPR-208ENST00000492973 ALX3O95076 343 aa9.04□□□□□ -0.96
TPR-208ENST00000492973 GSTM4Q03013 218 aa9.04□□□□□ -0.96
TPR-208ENST00000492973 ACAD11Q709F0 780 aa9.04□□□□□ -0.96
TPR-208ENST00000492973 RGPD1P0DJD0 1748 aa9.03□□□□□ -0.96
TPR-208ENST00000492973 LOC100289279A0A1B0GTE1 492 aa9.03□□□□□ -0.96
TPR-208ENST00000492973 CYP27B1O15528 508 aa9.03□□□□□ -0.96
TPR-208ENST00000492973 GSTT1P30711 240 aa9.03□□□□□ -0.96
TPR-208ENST00000492973 PRKAR2BP31323 418 aa9.03□□□□□ -0.96
TPR-208ENST00000492973 AGGF1Q8N302 714 aaeCLIP9.03□□□□□ -0.962e-11■■□□□ 12
TPR-208ENST00000492973 DDX54Q8TDD1 881 aaKnown RBP9.03□□□□□ -0.96
TPR-208ENST00000492973 PHACTR3Q96KR7 559 aa9.03□□□□□ -0.96
TPR-208ENST00000492973 TRIM56Q9BRZ2 755 aaKnown RBP9.03□□□□□ -0.96
TPR-208ENST00000492973 PLEKHG2Q9H7P9 1386 aa9.02□□□□□ -0.97
TPR-208ENST00000492973 RGPD2P0DJD1 1756 aa9.02□□□□□ -0.97
TPR-208ENST00000492973 MFAP1P55081 439 aaKnown RBP9.02□□□□□ -0.97
TPR-208ENST00000492973 TAGLNQ01995 201 aaKnown RBP9.02□□□□□ -0.97
TPR-208ENST00000492973 PLEKHO1Q53GL0 409 aaPredicted RBP9.02□□□□□ -0.97
TPR-208ENST00000492973 DZIP1LQ8IYY4 767 aaKnown RBP9.02□□□□□ -0.97
TPR-208ENST00000492973 MEGF10Q96KG7 1140 aa9.02□□□□□ -0.97
TPR-208ENST00000492973 PLEKHF1Q96S99 279 aa9.02□□□□□ -0.97
TPR-208ENST00000492973 TPSG1Q9NRR2 321 aa9.02□□□□□ -0.97
TPR-208ENST00000492973 FAM8A1Q9UBU6 413 aa9.02□□□□□ -0.97
TPR-208ENST00000492973 EP400Q96L91 3159 aa9.02□□□□□ -0.97
TPR-208ENST00000492973 LRRC37A3O60309 1634 aa9.02□□□□□ -0.97
TPR-208ENST00000492973 DLGAP3O95886 979 aa9.01□□□□□ -0.97
TPR-208ENST00000492973 PHKG2P15735 406 aa9.01□□□□□ -0.97
TPR-208ENST00000492973 MTHFSDQ2M296 383 aaKnown RBP9.01□□□□□ -0.97
TPR-208ENST00000492973 AMOTQ4VCS5 1084 aa9.01□□□□□ -0.97
TPR-208ENST00000492973 ZNF530Q6P9A1 599 aaPredicted RBP9.01□□□□□ -0.97
TPR-208ENST00000492973 YTHDC1Q96MU7 727 aaKnown RBP9.01□□□□□ -0.97
TPR-208ENST00000492973 USP26Q9BXU7 913 aa9.01□□□□□ -0.97
TPR-208ENST00000492973 PARP2Q9UGN5 583 aa9.01□□□□□ -0.97
TPR-208ENST00000492973 PPM1HQ9ULR3 514 aa9.01□□□□□ -0.97
TPR-208ENST00000492973 AKAP2Q9Y2D5 859 aa9.01□□□□□ -0.97
TPR-208ENST00000492973 AK5Q9Y6K8 562 aa9.01□□□□□ -0.97
TPR-208ENST00000492973 PCDH11XQ9BZA7 1347 aa9.01□□□□□ -0.97
TPR-208ENST00000492973 PCDH11YQ9BZA8 1340 aa9.01□□□□□ -0.97
TPR-208ENST00000492973 PARP4Q9UKK3 1724 aaKnown RBP9□□□□□ -0.97
TPR-208ENST00000492973 BCL9O00512 1426 aa9□□□□□ -0.97
TPR-208ENST00000492973 MEGF11A6BM72 1044 aa9□□□□□ -0.97
TPR-208ENST00000492973 USP17L7P0C7H9 530 aa9□□□□□ -0.97
TPR-208ENST00000492973 DAB2P98082 770 aa9□□□□□ -0.97
TPR-208ENST00000492973 DOC2BQ14184 412 aa9□□□□□ -0.97
TPR-208ENST00000492973 WDR43Q15061 677 aaKnown RBP eCLIP9□□□□□ -0.975e-8■□□□□ 11.3
TPR-208ENST00000492973 FAM196AQ6ZSG2 479 aa9□□□□□ -0.97
TPR-208ENST00000492973 PTF1AQ7RTS3 328 aa9□□□□□ -0.97
TPR-208ENST00000492973 RUSC1Q9BVN2 902 aa9□□□□□ -0.97
TPR-208ENST00000492973 CYP11A1P05108 521 aa8.99□□□□□ -0.97
TPR-208ENST00000492973 CTSBP07858 339 aa8.99□□□□□ -0.97
TPR-208ENST00000492973 EIF4BP23588 611 aaKnown RBP8.99□□□□□ -0.97
TPR-208ENST00000492973 ZNF157P51786 506 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms