RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 IPO9Q96P70 1041 aaKnown RBP6.84□□□□□ -1.31
SND1-216ENST00000492840 APBA2Q99767 749 aa6.84□□□□□ -1.31
SND1-216ENST00000492840 ADAM30Q9UKF2 790 aa6.84□□□□□ -1.31
SND1-216ENST00000492840 PHF24Q9UPV7 400 aa6.84□□□□□ -1.31
SND1-216ENST00000492840 ABCA8O94911 1581 aa6.83□□□□□ -1.32
SND1-216ENST00000492840 SETD1BQ9UPS6 1966 aaKnown RBP6.83□□□□□ -1.32
SND1-216ENST00000492840 SOBPA7XYQ1 873 aa6.83□□□□□ -1.32
SND1-216ENST00000492840 ZNF862O60290 1169 aa6.83□□□□□ -1.32
SND1-216ENST00000492840 DNAJC8O75937 253 aaPredicted RBP6.83□□□□□ -1.32
SND1-216ENST00000492840 PGRP06401 933 aa6.83□□□□□ -1.32
SND1-216ENST00000492840 RAG1P15918 1043 aa6.83□□□□□ -1.32
SND1-216ENST00000492840 GRK4P32298 578 aa6.83□□□□□ -1.32
SND1-216ENST00000492840 RAB27AP51159 221 aa6.83□□□□□ -1.32
SND1-216ENST00000492840 PMS1P54277 932 aaKnown RBP6.83□□□□□ -1.32
SND1-216ENST00000492840 PPP2R2AP63151 447 aa6.83□□□□□ -1.32
SND1-216ENST00000492840 SUMO1P63165 101 aaKnown RBP6.83□□□□□ -1.32
SND1-216ENST00000492840 BBS9Q3SYG4 887 aa6.83□□□□□ -1.32
SND1-216ENST00000492840 LHFPL2Q6ZUX7 228 aa6.83□□□□□ -1.32
SND1-216ENST00000492840 SCUBE1Q8IWY4 988 aa6.83□□□□□ -1.32
SND1-216ENST00000492840 CCDC155Q8N6L0 562 aa6.83□□□□□ -1.32
SND1-216ENST00000492840 LEO1Q8WVC0 666 aaPredicted RBP6.83□□□□□ -1.32
SND1-216ENST00000492840 TNFRSF25Q93038 417 aa6.83□□□□□ -1.32
SND1-216ENST00000492840 GMCL1Q96IK5 515 aa6.83□□□□□ -1.32
SND1-216ENST00000492840 CORO1BQ9BR76 489 aa6.83□□□□□ -1.32
SND1-216ENST00000492840 PRDM16Q9HAZ2 1276 aa6.83□□□□□ -1.32
SND1-216ENST00000492840 FRRS1LQ9P0K9 344 aa6.83□□□□□ -1.32
SND1-216ENST00000492840 SFMBT1Q9UHJ3 866 aa6.83□□□□□ -1.32
SND1-216ENST00000492840 NCOA1Q15788 1441 aa6.83□□□□□ -1.32
SND1-216ENST00000492840 DENND4BO75064 1496 aaPredicted RBP6.82□□□□□ -1.32
SND1-216ENST00000492840 PRAMEF27A3QJZ7 478 aa6.82□□□□□ -1.32
SND1-216ENST00000492840 ANKRD34BA5PLL1 514 aa6.82□□□□□ -1.32
SND1-216ENST00000492840 FAM187AA6NFU0 413 aa6.82□□□□□ -1.32
SND1-216ENST00000492840 DCDC2CA8MYV0 355 aa6.82□□□□□ -1.32
SND1-216ENST00000492840 AKAP10O43572 662 aa6.82□□□□□ -1.32
SND1-216ENST00000492840 CREB3O43889 395 aa6.82□□□□□ -1.32
SND1-216ENST00000492840 PLIN1O60240 522 aa6.82□□□□□ -1.32
SND1-216ENST00000492840 CYP11A1P05108 521 aa6.82□□□□□ -1.32
SND1-216ENST00000492840 ATF3P18847 181 aa6.82□□□□□ -1.32
SND1-216ENST00000492840 HSPA1LP34931 641 aa6.82□□□□□ -1.32
SND1-216ENST00000492840 SMCPP49901 116 aaPredicted RBP6.82□□□□□ -1.32
SND1-216ENST00000492840 STRN3Q13033 797 aa6.82□□□□□ -1.32
SND1-216ENST00000492840 MTMR1Q13613 665 aa6.82□□□□□ -1.32
SND1-216ENST00000492840 POU4F3Q15319 338 aa6.82□□□□□ -1.32
SND1-216ENST00000492840 TRIM61Q5EBN2 209 aa6.82□□□□□ -1.32
SND1-216ENST00000492840 GDF6Q6KF10 455 aaPredicted RBP6.82□□□□□ -1.32
SND1-216ENST00000492840 ZNF227Q86WZ6 799 aa6.82□□□□□ -1.32
SND1-216ENST00000492840 SLC7A3Q8WY07 619 aa6.82□□□□□ -1.32
SND1-216ENST00000492840 ACSF2Q96CM8 615 aaPredicted RBP6.82□□□□□ -1.32
SND1-216ENST00000492840 SMAD5Q99717 465 aaKnown RBP6.82□□□□□ -1.32
SND1-216ENST00000492840 TRIM39Q9HCM9 518 aa6.82□□□□□ -1.32
SND1-216ENST00000492840 ZIM2Q9NZV7 527 aa6.82□□□□□ -1.32
SND1-216ENST00000492840 FHOD3Q2V2M9 1422 aa6.82□□□□□ -1.32
SND1-216ENST00000492840 CFAP74Q9C0B2 1584 aa6.82□□□□□ -1.32
SND1-216ENST00000492840 IGF1RP08069 1367 aa6.82□□□□□ -1.32
SND1-216ENST00000492840 GPR39O43194 453 aa6.81□□□□□ -1.32
SND1-216ENST00000492840 KRT18P05783 430 aaKnown RBP6.81□□□□□ -1.32
SND1-216ENST00000492840 ITGAVP06756 1048 aa6.81□□□□□ -1.32
SND1-216ENST00000492840 EPHX1P07099 455 aa6.81□□□□□ -1.32
SND1-216ENST00000492840 CTSBP07858 339 aa6.81□□□□□ -1.32
SND1-216ENST00000492840 FGFR1P11362 822 aa6.81□□□□□ -1.32
SND1-216ENST00000492840 MAOBP27338 520 aa6.81□□□□□ -1.32
SND1-216ENST00000492840 ADH7P40394 386 aa6.81□□□□□ -1.32
SND1-216ENST00000492840 TDRD10Q5VZ19 366 aaKnown RBP6.81□□□□□ -1.32
SND1-216ENST00000492840 PKN3Q6P5Z2 889 aa6.81□□□□□ -1.32
SND1-216ENST00000492840 C14orf80Q86SX3 495 aa6.81□□□□□ -1.32
SND1-216ENST00000492840 SPNS2Q8IVW8 549 aa6.81□□□□□ -1.32
SND1-216ENST00000492840 TMEM192Q8IY95 271 aa6.81□□□□□ -1.32
SND1-216ENST00000492840 CHPFQ8IZ52 775 aa6.81□□□□□ -1.32
SND1-216ENST00000492840 AHI1Q8N157 1196 aa6.81□□□□□ -1.32
SND1-216ENST00000492840 MYO1HQ8N1T3 1032 aa6.81□□□□□ -1.32
SND1-216ENST00000492840 WDR66Q8TBY9 1149 aa6.81□□□□□ -1.32
SND1-216ENST00000492840 MTMR8Q96EF0 704 aa6.81□□□□□ -1.32
SND1-216ENST00000492840 SLC39A13Q96H72 371 aa6.81□□□□□ -1.32
SND1-216ENST00000492840 SLC6A18Q96N87 628 aa6.81□□□□□ -1.32
SND1-216ENST00000492840 HAUS7Q99871 368 aa6.81□□□□□ -1.32
SND1-216ENST00000492840 ARNT2Q9HBZ2 717 aa6.81□□□□□ -1.32
SND1-216ENST00000492840 FAM86C1Q9NVL1 165 aa6.81□□□□□ -1.32
SND1-216ENST00000492840 SLC5A4Q9NY91 659 aa6.81□□□□□ -1.32
SND1-216ENST00000492840 LRP2BPQ9P2M1 347 aa6.81□□□□□ -1.32
SND1-216ENST00000492840 SUCOQ9UBS9 1254 aaKnown RBP6.81□□□□□ -1.32
SND1-216ENST00000492840 APEX2Q9UBZ4 518 aa6.81□□□□□ -1.32
SND1-216ENST00000492840 KIF27Q86VH2 1401 aa6.81□□□□□ -1.32
SND1-216ENST00000492840 MAGI2Q86UL8 1455 aa6.8□□□□□ -1.32
SND1-216ENST00000492840 EIF4EBP3O60516 100 aaPredicted RBP6.8□□□□□ -1.32
SND1-216ENST00000492840 CAPNS1P04632 268 aa6.8□□□□□ -1.32
SND1-216ENST00000492840 C6orf222P0C671 652 aaPredicted RBP6.8□□□□□ -1.32
SND1-216ENST00000492840 PABPC1P11940 636 aaKnown RBP6.8□□□□□ -1.32
SND1-216ENST00000492840 POU3F2P20265 443 aaPredicted RBP6.8□□□□□ -1.32
SND1-216ENST00000492840 CDC25BP30305 580 aa6.8□□□□□ -1.32
SND1-216ENST00000492840 PCBP4P57723 403 aaKnown RBP6.8□□□□□ -1.32
SND1-216ENST00000492840 PIP4K2BP78356 416 aa6.8□□□□□ -1.32
SND1-216ENST00000492840 C19orf57Q0VDD7 668 aa6.8□□□□□ -1.32
SND1-216ENST00000492840 PIN1Q13526 163 aaPredicted RBP6.8□□□□□ -1.32
SND1-216ENST00000492840 PDE3AQ14432 1141 aa6.8□□□□□ -1.32
SND1-216ENST00000492840 STAT4Q14765 748 aa6.8□□□□□ -1.32
SND1-216ENST00000492840 DHCR24Q15392 516 aa6.8□□□□□ -1.32
SND1-216ENST00000492840 KIF4BQ2VIQ3 1234 aa6.8□□□□□ -1.32
SND1-216ENST00000492840 RNF219Q5W0B1 726 aaPredicted RBP6.8□□□□□ -1.32
SND1-216ENST00000492840 TSHZ1Q6ZSZ6 1077 aa6.8□□□□□ -1.32
SND1-216ENST00000492840 CACTIN-AS1Q8N1I8 211 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms