RNA–Protein interactions for RNA: ENST00000492423.5

COPS7B-222, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-222ENST00000492423 RASGRP2Q7LDG7 609 aa17.37■□□□□ 0.37
COPS7B-222ENST00000492423 SIAH1Q8IUQ4 282 aa17.37■□□□□ 0.37
COPS7B-222ENST00000492423 ZC3H15Q8WU90 426 aaKnown RBP17.37■□□□□ 0.37
COPS7B-222ENST00000492423 CHMP4CQ96CF2 233 aa17.37■□□□□ 0.37
COPS7B-222ENST00000492423 MAP3K14Q99558 947 aa17.37■□□□□ 0.37
COPS7B-222ENST00000492423 KANSL2Q9H9L4 492 aa17.37■□□□□ 0.37
COPS7B-222ENST00000492423 DHX16O60231 1041 aaKnown RBP17.36■□□□□ 0.37
COPS7B-222ENST00000492423 EEF2P13639 858 aaKnown RBP17.36■□□□□ 0.37
COPS7B-222ENST00000492423 FDPSP14324 419 aaKnown RBP17.36■□□□□ 0.37
COPS7B-222ENST00000492423 HMGN5P82970 282 aaKnown RBP17.36■□□□□ 0.37
COPS7B-222ENST00000492423 ICA1Q05084 483 aa17.36■□□□□ 0.37
COPS7B-222ENST00000492423 PKP1Q13835 747 aa17.36■□□□□ 0.37
COPS7B-222ENST00000492423 PPP4R3BQ5MIZ7 849 aa17.36■□□□□ 0.37
COPS7B-222ENST00000492423 DCAF15Q66K64 600 aa17.36■□□□□ 0.37
COPS7B-222ENST00000492423 DLK2Q6UY11 383 aa17.36■□□□□ 0.37
COPS7B-222ENST00000492423 LRRC47Q8N1G4 583 aaKnown RBP17.36■□□□□ 0.37
COPS7B-222ENST00000492423 CABP5Q9NP86 173 aa17.36■□□□□ 0.37
COPS7B-222ENST00000492423 RBM28Q9NW13 759 aaKnown RBP17.36■□□□□ 0.37
COPS7B-222ENST00000492423 PTPRFP10586 1907 aa17.35■□□□□ 0.37
COPS7B-222ENST00000492423 CPLX1O14810 134 aa17.35■□□□□ 0.37
COPS7B-222ENST00000492423 PPFIA3O75145 1194 aa17.35■□□□□ 0.37
COPS7B-222ENST00000492423 PLEKHA8P1O95397 391 aa17.35■□□□□ 0.37
COPS7B-222ENST00000492423 IFNAR1P17181 557 aa17.35■□□□□ 0.37
COPS7B-222ENST00000492423 FUT2Q10981 343 aa17.35■□□□□ 0.37
COPS7B-222ENST00000492423 PPP2R5BQ15173 497 aa17.35■□□□□ 0.37
COPS7B-222ENST00000492423 EAPPQ56P03 285 aaPredicted RBP17.35■□□□□ 0.37
COPS7B-222ENST00000492423 TMTC3Q6ZXV5 915 aa17.35■□□□□ 0.37
COPS7B-222ENST00000492423 SULF1Q8IWU6 871 aa17.35■□□□□ 0.37
COPS7B-222ENST00000492423 MKL1Q969V6 931 aa17.35■□□□□ 0.37
COPS7B-222ENST00000492423 HOOK2Q96ED9 719 aa17.35■□□□□ 0.37
COPS7B-222ENST00000492423 DDX11Q96FC9 970 aa17.35■□□□□ 0.37
COPS7B-222ENST00000492423 ZNF341Q9BYN7 854 aa17.35■□□□□ 0.37
COPS7B-222ENST00000492423 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.35■□□□□ 0.37
COPS7B-222ENST00000492423 CLIP2Q9UDT6 1046 aa17.35■□□□□ 0.37
COPS7B-222ENST00000492423 ZNF112Q9UJU3 913 aa17.35■□□□□ 0.37
COPS7B-222ENST00000492423 ZDHHC9Q9Y397 364 aa17.35■□□□□ 0.37
COPS7B-222ENST00000492423 CNTNAP5Q8WYK1 1306 aa17.35■□□□□ 0.37
COPS7B-222ENST00000492423 STK36Q9NRP7 1315 aa17.35■□□□□ 0.37
COPS7B-222ENST00000492423 CCDC196A0A1B0GTZ2 297 aa17.34■□□□□ 0.37
COPS7B-222ENST00000492423 POTEIP0CG38 1075 aa17.34■□□□□ 0.37
COPS7B-222ENST00000492423 POTEJP0CG39 1038 aa17.34■□□□□ 0.37
COPS7B-222ENST00000492423 SNHG28P0DPA3 235 aa17.34■□□□□ 0.37
COPS7B-222ENST00000492423 RAB3GAP1Q15042 981 aa17.34■□□□□ 0.37
COPS7B-222ENST00000492423 KRT26Q7Z3Y9 468 aa17.34■□□□□ 0.37
COPS7B-222ENST00000492423 NBPF11Q86T75 865 aa17.34■□□□□ 0.37
COPS7B-222ENST00000492423 PNMA8AQ86V59 439 aaPredicted RBP17.34■□□□□ 0.37
COPS7B-222ENST00000492423 CTCFLQ8NI51 663 aaPredicted RBP17.34■□□□□ 0.37
COPS7B-222ENST00000492423 MAD2L2Q9UI95 211 aa17.34■□□□□ 0.37
COPS7B-222ENST00000492423 BAZ2BQ9UIF8 2168 aaKnown RBP17.34■□□□□ 0.37
COPS7B-222ENST00000492423 PARP14Q460N5 1801 aa17.33■□□□□ 0.37
COPS7B-222ENST00000492423 PALM3A6NDB9 673 aaPredicted RBP17.33■□□□□ 0.36
COPS7B-222ENST00000492423 CDKL5O76039 1030 aa17.33■□□□□ 0.36
COPS7B-222ENST00000492423 FMNL1O95466 1100 aaPredicted RBP17.33■□□□□ 0.36
COPS7B-222ENST00000492423 PDHBP11177 359 aa17.33■□□□□ 0.36
COPS7B-222ENST00000492423 SYT1P21579 422 aa17.33■□□□□ 0.36
COPS7B-222ENST00000492423 INPP5BP32019 993 aa17.33■□□□□ 0.36
COPS7B-222ENST00000492423 SLC35G1Q2M3R5 365 aa17.33■□□□□ 0.36
COPS7B-222ENST00000492423 CPLX2Q6PUV4 134 aaKnown RBP17.33■□□□□ 0.36
COPS7B-222ENST00000492423 CMTR1Q8N1G2 835 aaKnown RBP17.33■□□□□ 0.36
COPS7B-222ENST00000492423 STAG2Q8N3U4 1231 aa17.33■□□□□ 0.36
COPS7B-222ENST00000492423 PHKBQ93100 1093 aa17.33■□□□□ 0.36
COPS7B-222ENST00000492423 GINM1Q9NU53 330 aa17.33■□□□□ 0.36
COPS7B-222ENST00000492423 ORC3Q9UBD5 711 aaPredicted RBP17.33■□□□□ 0.36
COPS7B-222ENST00000492423 FZD1Q9UP38 647 aa17.33■□□□□ 0.36
COPS7B-222ENST00000492423 A0A1W2PRG0 241 aa17.32■□□□□ 0.36
COPS7B-222ENST00000492423 USP17L5A8MUK1 530 aa17.32■□□□□ 0.36
COPS7B-222ENST00000492423 CTNND1O60716 968 aaKnown RBP17.32■□□□□ 0.36
COPS7B-222ENST00000492423 BRD1O95696 1058 aa17.32■□□□□ 0.36
COPS7B-222ENST00000492423 ASNSP08243 561 aa17.32■□□□□ 0.36
COPS7B-222ENST00000492423 KIF5BP33176 963 aa17.32■□□□□ 0.36
COPS7B-222ENST00000492423 ATP2B2Q01814 1243 aa17.32■□□□□ 0.36
COPS7B-222ENST00000492423 SUPT20HL1Q3ZLR7 823 aa17.32■□□□□ 0.36
COPS7B-222ENST00000492423 USP48Q86UV5 1035 aa17.32■□□□□ 0.36
COPS7B-222ENST00000492423 SRBD1Q8N5C6 995 aaKnown RBP17.32■□□□□ 0.36
COPS7B-222ENST00000492423 CDCA5Q96FF9 252 aa17.32■□□□□ 0.36
COPS7B-222ENST00000492423 GLIS2Q9BZE0 524 aaPredicted RBP17.32■□□□□ 0.36
COPS7B-222ENST00000492423 RRAGCQ9HB90 399 aa17.32■□□□□ 0.36
COPS7B-222ENST00000492423 GPBP1L1Q9HC44 474 aaPredicted RBP17.32■□□□□ 0.36
COPS7B-222ENST00000492423 MTMR7Q9Y216 660 aa17.32■□□□□ 0.36
COPS7B-222ENST00000492423 TRPM7Q96QT4 1865 aa17.32■□□□□ 0.36
COPS7B-222ENST00000492423 TCHHQ07283 1943 aa17.31■□□□□ 0.36
COPS7B-222ENST00000492423 UBE2Q2LH0YL09 131 aa17.31■□□□□ 0.36
COPS7B-222ENST00000492423 NUCB2P80303 420 aa17.31■□□□□ 0.36
COPS7B-222ENST00000492423 CCDC84Q86UT8 332 aaPredicted RBP17.31■□□□□ 0.36
COPS7B-222ENST00000492423 ACER1Q8TDN7 264 aa17.31■□□□□ 0.36
COPS7B-222ENST00000492423 KLRG1Q96E93 195 aa17.31■□□□□ 0.36
COPS7B-222ENST00000492423 RNF26Q9BY78 433 aaPredicted RBP17.31■□□□□ 0.36
COPS7B-222ENST00000492423 SYNPO2Q9UMS6 1093 aa17.31■□□□□ 0.36
COPS7B-222ENST00000492423 MTMR6Q9Y217 621 aa17.31■□□□□ 0.36
COPS7B-222ENST00000492423 STX6O43752 255 aa17.3■□□□□ 0.36
COPS7B-222ENST00000492423 USP2O75604 605 aaPredicted RBP17.3■□□□□ 0.36
COPS7B-222ENST00000492423 PARP1P09874 1014 aaKnown RBP17.3■□□□□ 0.36
COPS7B-222ENST00000492423 VEGFAP15692 232 aaPredicted RBP17.3■□□□□ 0.36
COPS7B-222ENST00000492423 ECE1P42892 770 aa17.3■□□□□ 0.36
COPS7B-222ENST00000492423 SSRP1Q08945 709 aaKnown RBP17.3■□□□□ 0.36
COPS7B-222ENST00000492423 ZNF543Q08ER8 600 aa17.3■□□□□ 0.36
COPS7B-222ENST00000492423 ASPRV1Q53RT3 343 aa17.3■□□□□ 0.36
COPS7B-222ENST00000492423 NOL9Q5SY16 702 aaKnown RBP17.3■□□□□ 0.36
COPS7B-222ENST00000492423 LARP1BQ659C4 914 aaKnown RBP17.3■□□□□ 0.36
COPS7B-222ENST00000492423 USP17L2Q6R6M4 530 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms