RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 RPAP3Q9H6T3 665 aaPredicted RBP10.1□□□□□ -0.79
SMARCB1-207ENST00000491967 HMX1Q9NP08 348 aaPredicted RBP10.1□□□□□ -0.79
SMARCB1-207ENST00000491967 PCDHB15Q9Y5E8 787 aa10.1□□□□□ -0.79
SMARCB1-207ENST00000491967 ZNF236Q9UL36 1845 aa10.1□□□□□ -0.79
SMARCB1-207ENST00000491967 GSG1L2A8MUP6 293 aa10.09□□□□□ -0.79
SMARCB1-207ENST00000491967 AKR1B1P15121 316 aa10.09□□□□□ -0.79
SMARCB1-207ENST00000491967 PTPREP23469 700 aa10.09□□□□□ -0.79
SMARCB1-207ENST00000491967 RGS2P41220 211 aa10.09□□□□□ -0.79
SMARCB1-207ENST00000491967 CACNB2Q08289 660 aaPredicted RBP10.09□□□□□ -0.79
SMARCB1-207ENST00000491967 MAP2K5Q13163 448 aa10.09□□□□□ -0.79
SMARCB1-207ENST00000491967 GRB14Q14449 540 aa10.09□□□□□ -0.79
SMARCB1-207ENST00000491967 ZSCAN25Q6NSZ9 544 aa10.09□□□□□ -0.79
SMARCB1-207ENST00000491967 KBTBD3Q8NAB2 608 aa10.09□□□□□ -0.79
SMARCB1-207ENST00000491967 DPF3Q92784 378 aa10.09□□□□□ -0.79
SMARCB1-207ENST00000491967 PAWRQ96IZ0 340 aaKnown RBP10.09□□□□□ -0.79
SMARCB1-207ENST00000491967 APBA2Q99767 749 aa10.09□□□□□ -0.79
SMARCB1-207ENST00000491967 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.09□□□□□ -0.79
SMARCB1-207ENST00000491967 NR2E3Q9Y5X4 410 aa10.09□□□□□ -0.79
SMARCB1-207ENST00000491967 FRMPD3Q5JV73 1810 aa10.08□□□□□ -0.8
SMARCB1-207ENST00000491967 CYP2D7A0A087X1C5 515 aa10.08□□□□□ -0.8
SMARCB1-207ENST00000491967 STRNO43815 780 aa10.08□□□□□ -0.8
SMARCB1-207ENST00000491967 GLRX3O76003 335 aaKnown RBP10.08□□□□□ -0.8
SMARCB1-207ENST00000491967 COL6A1P12109 1028 aa10.08□□□□□ -0.8
SMARCB1-207ENST00000491967 PRKAR2AP13861 404 aaKnown RBP10.08□□□□□ -0.8
SMARCB1-207ENST00000491967 ZYXQ15942 572 aaKnown RBP10.08□□□□□ -0.8
SMARCB1-207ENST00000491967 CCL14Q16627 93 aa10.08□□□□□ -0.8
SMARCB1-207ENST00000491967 NECAB2Q7Z6G3 386 aa10.08□□□□□ -0.8
SMARCB1-207ENST00000491967 MB21D1Q8N884 522 aa10.08□□□□□ -0.8
SMARCB1-207ENST00000491967 SHCBP1Q8NEM2 672 aa10.08□□□□□ -0.8
SMARCB1-207ENST00000491967 DIS3LQ8TF46 1054 aaKnown RBP10.08□□□□□ -0.8
SMARCB1-207ENST00000491967 OSBP2Q969R2 916 aa10.08□□□□□ -0.8
SMARCB1-207ENST00000491967 PAGR1Q9BTK6 254 aa10.08□□□□□ -0.8
SMARCB1-207ENST00000491967 VCPKMTQ9H867 229 aa10.08□□□□□ -0.8
SMARCB1-207ENST00000491967 KANSL2Q9H9L4 492 aa10.08□□□□□ -0.8
SMARCB1-207ENST00000491967 SLC4A4Q9Y6R1 1079 aa10.08□□□□□ -0.8
SMARCB1-207ENST00000491967 TTC41PQ6P2S7 1318 aa10.07□□□□□ -0.8
SMARCB1-207ENST00000491967 SALL3Q9BXA9 1300 aa10.07□□□□□ -0.8
SMARCB1-207ENST00000491967 ROBO3Q96MS0 1386 aa10.07□□□□□ -0.8
SMARCB1-207ENST00000491967 RNF113AO15541 343 aaKnown RBP10.07□□□□□ -0.8
SMARCB1-207ENST00000491967 ZFYP08048 801 aaPredicted RBP10.07□□□□□ -0.8
SMARCB1-207ENST00000491967 ZKSCAN1P17029 563 aaPredicted RBP10.07□□□□□ -0.8
SMARCB1-207ENST00000491967 DSG3P32926 999 aa10.07□□□□□ -0.8
SMARCB1-207ENST00000491967 ABRAQ8N0Z2 381 aa10.07□□□□□ -0.8
SMARCB1-207ENST00000491967 PI4K2BQ8TCG2 481 aa10.07□□□□□ -0.8
SMARCB1-207ENST00000491967 APPBP2Q92624 585 aa10.07□□□□□ -0.8
SMARCB1-207ENST00000491967 MOV10L1Q9BXT6 1211 aaKnown RBP10.07□□□□□ -0.8
SMARCB1-207ENST00000491967 NBPF3Q9H094 633 aa10.07□□□□□ -0.8
SMARCB1-207ENST00000491967 FLRT1Q9NZU1 646 aa10.07□□□□□ -0.8
SMARCB1-207ENST00000491967 RBM27Q9P2N5 1060 aaKnown RBP10.07□□□□□ -0.8
SMARCB1-207ENST00000491967 ARPP21Q9UBL0 812 aaPredicted RBP10.07□□□□□ -0.8
SMARCB1-207ENST00000491967 COL11A1P12107 1806 aaPredicted RBP10.07□□□□□ -0.8
SMARCB1-207ENST00000491967 SMCHD1A6NHR9 2005 aa10.06□□□□□ -0.8
SMARCB1-207ENST00000491967 IGKV6D-41A0A0C4DH26 115 aa10.06□□□□□ -0.8
SMARCB1-207ENST00000491967 A0A1W2PPC1 479 aa10.06□□□□□ -0.8
SMARCB1-207ENST00000491967 MPHOSPH10O00566 681 aaKnown RBP10.06□□□□□ -0.8
SMARCB1-207ENST00000491967 WDR46O15213 610 aaKnown RBP10.06□□□□□ -0.8
SMARCB1-207ENST00000491967 EEF2P13639 858 aaKnown RBP10.06□□□□□ -0.8
SMARCB1-207ENST00000491967 RASA1P20936 1047 aa10.06□□□□□ -0.8
SMARCB1-207ENST00000491967 CCND3P30281 292 aaPredicted RBP10.06□□□□□ -0.8
SMARCB1-207ENST00000491967 ICA1Q05084 483 aa10.06□□□□□ -0.8
SMARCB1-207ENST00000491967 OLFML2BQ68BL8 750 aa10.06□□□□□ -0.8
SMARCB1-207ENST00000491967 CCAR1Q8IX12 1150 aaKnown RBP10.06□□□□□ -0.8
SMARCB1-207ENST00000491967 NPLOC4Q8TAT6 608 aa10.06□□□□□ -0.8
SMARCB1-207ENST00000491967 SPATC1LQ9H0A9 340 aa10.06□□□□□ -0.8
SMARCB1-207ENST00000491967 SH2D4AQ9H788 454 aa10.06□□□□□ -0.8
SMARCB1-207ENST00000491967 ARHGEF10LQ9HCE6 1279 aa10.06□□□□□ -0.8
SMARCB1-207ENST00000491967 PFASO15067 1338 aa10.06□□□□□ -0.8
SMARCB1-207ENST00000491967 EVI5O60447 810 aa10.05□□□□□ -0.8
SMARCB1-207ENST00000491967 COBLO75128 1261 aa10.05□□□□□ -0.8
SMARCB1-207ENST00000491967 GNAT2P19087 354 aa10.05□□□□□ -0.8
SMARCB1-207ENST00000491967 BMP8BP34820 402 aa10.05□□□□□ -0.8
SMARCB1-207ENST00000491967 CHRDL2Q6WN34 429 aa10.05□□□□□ -0.8
SMARCB1-207ENST00000491967 TICAM2Q86XR7 235 aa10.05□□□□□ -0.8
SMARCB1-207ENST00000491967 CLEC10AQ8IUN9 316 aa10.05□□□□□ -0.8
SMARCB1-207ENST00000491967 AMOTL1Q8IY63 956 aa10.05□□□□□ -0.8
SMARCB1-207ENST00000491967 REPS2Q8NFH8 660 aa10.05□□□□□ -0.8
SMARCB1-207ENST00000491967 MKL1Q969V6 931 aa10.05□□□□□ -0.8
SMARCB1-207ENST00000491967 DDRGK1Q96HY6 314 aa10.05□□□□□ -0.8
SMARCB1-207ENST00000491967 GPATCH3Q96I76 525 aa10.05□□□□□ -0.8
SMARCB1-207ENST00000491967 GDF15Q99988 308 aa10.05□□□□□ -0.8
SMARCB1-207ENST00000491967 MROH8Q9H579 483 aa10.05□□□□□ -0.8
SMARCB1-207ENST00000491967 EPB41L4AQ9HCS5 686 aaPredicted RBP10.05□□□□□ -0.8
SMARCB1-207ENST00000491967 NYAP2Q9P242 653 aa10.05□□□□□ -0.8
SMARCB1-207ENST00000491967 SYNPO2Q9UMS6 1093 aa10.05□□□□□ -0.8
SMARCB1-207ENST00000491967 PATL2C9JE40 543 aaKnown RBP10.04□□□□□ -0.8
SMARCB1-207ENST00000491967 VWA5AO00534 786 aa10.04□□□□□ -0.8
SMARCB1-207ENST00000491967 GPAA1O43292 621 aa10.04□□□□□ -0.8
SMARCB1-207ENST00000491967 FLOT1O75955 427 aa10.04□□□□□ -0.8
SMARCB1-207ENST00000491967 CYBAP13498 195 aa10.04□□□□□ -0.8
SMARCB1-207ENST00000491967 ERCC3P19447 782 aa10.04□□□□□ -0.8
SMARCB1-207ENST00000491967 ADORA2AP29274 412 aa10.04□□□□□ -0.8
SMARCB1-207ENST00000491967 RRP1P56182 461 aaKnown RBP10.04□□□□□ -0.8
SMARCB1-207ENST00000491967 HDAC1Q13547 482 aaPredicted RBP10.04□□□□□ -0.8
SMARCB1-207ENST00000491967 TMEM132BQ14DG7 1078 aa10.04□□□□□ -0.8
SMARCB1-207ENST00000491967 ZMYM1Q5SVZ6 1142 aa10.04□□□□□ -0.8
SMARCB1-207ENST00000491967 MFSD14CQ5VZR4 134 aa10.04□□□□□ -0.8
SMARCB1-207ENST00000491967 TSHZ3Q63HK5 1081 aa10.04□□□□□ -0.8
SMARCB1-207ENST00000491967 SPICE1Q8N0Z3 855 aa10.04□□□□□ -0.8
SMARCB1-207ENST00000491967 TRPV1Q8NER1 839 aa10.04□□□□□ -0.8
SMARCB1-207ENST00000491967 OTUD7AQ8TE49 926 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms