RNA–Protein interactions for RNA: ENST00000491896.1

C3orf49-202, Transcript of chromosome 3 open reading frame 49, humanhuman

TSL 2

Gene C3orf49, Length 736 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf49-202ENST00000491896 USP17L17D6RBQ6 530 aa14.23□□□□□ -0.13
C3orf49-202ENST00000491896 USP17L19D6RCP7 530 aa14.23□□□□□ -0.13
C3orf49-202ENST00000491896 USP17L20D6RJB6 530 aa14.23□□□□□ -0.13
C3orf49-202ENST00000491896 WDR46O15213 610 aaKnown RBP14.23□□□□□ -0.13
C3orf49-202ENST00000491896 HOXD10P28358 340 aa14.23□□□□□ -0.13
C3orf49-202ENST00000491896 EVX2Q03828 476 aa14.23□□□□□ -0.13
C3orf49-202ENST00000491896 USP17L24Q0WX57 530 aa14.23□□□□□ -0.13
C3orf49-202ENST00000491896 SHROOM1Q2M3G4 852 aaPredicted RBP14.23□□□□□ -0.13
C3orf49-202ENST00000491896 MB21D1Q8N884 522 aa14.23□□□□□ -0.13
C3orf49-202ENST00000491896 CCDC136Q96JN2 1154 aa14.23□□□□□ -0.13
C3orf49-202ENST00000491896 VCPKMTQ9H867 229 aa14.23□□□□□ -0.13
C3orf49-202ENST00000491896 GOPCQ9HD26 462 aa14.23□□□□□ -0.13
C3orf49-202ENST00000491896 CTNNA3Q9UI47 895 aa14.23□□□□□ -0.13
C3orf49-202ENST00000491896 MGAMO43451 1857 aa14.23□□□□□ -0.13
C3orf49-202ENST00000491896 FGAP02671 866 aa14.22□□□□□ -0.13
C3orf49-202ENST00000491896 CYP2C8P10632 490 aa14.22□□□□□ -0.13
C3orf49-202ENST00000491896 FCGRTP55899 365 aa14.22□□□□□ -0.13
C3orf49-202ENST00000491896 HERVK_113P62684 666 aa14.22□□□□□ -0.13
C3orf49-202ENST00000491896 IFFO2Q5TF58 517 aa14.22□□□□□ -0.13
C3orf49-202ENST00000491896 VPS53Q5VIR6 699 aa14.22□□□□□ -0.13
C3orf49-202ENST00000491896 CCDC129Q6ZRS4 1044 aa14.22□□□□□ -0.13
C3orf49-202ENST00000491896 ZNF444Q8N0Y2 327 aaPredicted RBP14.22□□□□□ -0.13
C3orf49-202ENST00000491896 NEDD1Q8NHV4 660 aa14.22□□□□□ -0.13
C3orf49-202ENST00000491896 ABHD8Q96I13 439 aa14.22□□□□□ -0.13
C3orf49-202ENST00000491896 PARP14Q460N5 1801 aa14.22□□□□□ -0.13
C3orf49-202ENST00000491896 RBBP6Q7Z6E9 1792 aaKnown RBP14.22□□□□□ -0.13
C3orf49-202ENST00000491896 ZNF236Q9UL36 1845 aa14.21□□□□□ -0.13
C3orf49-202ENST00000491896 C19orf67A6NJJ6 358 aa14.21□□□□□ -0.13
C3orf49-202ENST00000491896 TTLL1O95922 423 aa14.21□□□□□ -0.13
C3orf49-202ENST00000491896 TSPY3P0CV98 308 aa14.21□□□□□ -0.13
C3orf49-202ENST00000491896 TSPY8P0CW00 308 aa14.21□□□□□ -0.13
C3orf49-202ENST00000491896 NOVP48745 357 aa14.21□□□□□ -0.13
C3orf49-202ENST00000491896 CWC27Q6UX04 472 aaKnown RBP14.21□□□□□ -0.13
C3orf49-202ENST00000491896 CATSPERGQ6ZRH7 1159 aa14.21□□□□□ -0.13
C3orf49-202ENST00000491896 GMCL1P1Q8NEA9 526 aa14.21□□□□□ -0.13
C3orf49-202ENST00000491896 CD99L2Q8TCZ2 262 aa14.21□□□□□ -0.13
C3orf49-202ENST00000491896 STAG1Q8WVM7 1258 aa14.21□□□□□ -0.13
C3orf49-202ENST00000491896 MKL1Q969V6 931 aa14.21□□□□□ -0.13
C3orf49-202ENST00000491896 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.21□□□□□ -0.13
C3orf49-202ENST00000491896 MTMR4Q9NYA4 1195 aa14.21□□□□□ -0.13
C3orf49-202ENST00000491896 RABGAP1Q9Y3P9 1069 aa14.21□□□□□ -0.13
C3orf49-202ENST00000491896 TRIM17Q9Y577 477 aa14.21□□□□□ -0.13
C3orf49-202ENST00000491896 RLFQ13129 1914 aa14.2□□□□□ -0.14
C3orf49-202ENST00000491896 MYH4Q9Y623 1939 aa14.2□□□□□ -0.14
C3orf49-202ENST00000491896 A0A1W2PRG0 241 aa14.2□□□□□ -0.14
C3orf49-202ENST00000491896 CHMLP26374 656 aa14.2□□□□□ -0.14
C3orf49-202ENST00000491896 SIAH1Q8IUQ4 282 aa14.2□□□□□ -0.14
C3orf49-202ENST00000491896 ACER1Q8TDN7 264 aa14.2□□□□□ -0.14
C3orf49-202ENST00000491896 TCP11L1Q9NUJ3 509 aa14.2□□□□□ -0.14
C3orf49-202ENST00000491896 HOXC10Q9NYD6 342 aa14.2□□□□□ -0.14
C3orf49-202ENST00000491896 CPA4Q9UI42 421 aa14.2□□□□□ -0.14
C3orf49-202ENST00000491896 PTPN22Q9Y2R2 807 aa14.2□□□□□ -0.14
C3orf49-202ENST00000491896 SGSM2O43147 1006 aa14.19□□□□□ -0.14
C3orf49-202ENST00000491896 EEF2P13639 858 aaKnown RBP14.19□□□□□ -0.14
C3orf49-202ENST00000491896 CAPN2P17655 700 aa14.19□□□□□ -0.14
C3orf49-202ENST00000491896 MAPK4P31152 587 aa14.19□□□□□ -0.14
C3orf49-202ENST00000491896 CCNA1P78396 465 aa14.19□□□□□ -0.14
C3orf49-202ENST00000491896 CCDC178Q5BJE1 867 aa14.19□□□□□ -0.14
C3orf49-202ENST00000491896 AKNAD1Q5T1N1 836 aa14.19□□□□□ -0.14
C3orf49-202ENST00000491896 ARMC5Q96C12 935 aa14.19□□□□□ -0.14
C3orf49-202ENST00000491896 TRIM47Q96LD4 638 aa14.19□□□□□ -0.14
C3orf49-202ENST00000491896 RPAP3Q9H6T3 665 aaPredicted RBP14.19□□□□□ -0.14
C3orf49-202ENST00000491896 CNNM2Q9H8M5 875 aa14.19□□□□□ -0.14
C3orf49-202ENST00000491896 SRRDQ9UH36 339 aa14.19□□□□□ -0.14
C3orf49-202ENST00000491896 TSPY2A6NKD2 308 aa14.18□□□□□ -0.14
C3orf49-202ENST00000491896 SMIM22K7EJ46 135 aa14.18□□□□□ -0.14
C3orf49-202ENST00000491896 PSMC4P43686 418 aa14.18□□□□□ -0.14
C3orf49-202ENST00000491896 ERVK-9P63128 1117 aa14.18□□□□□ -0.14
C3orf49-202ENST00000491896 ERVK-24P63145 666 aa14.18□□□□□ -0.14
C3orf49-202ENST00000491896 IRF5Q13568 498 aa14.18□□□□□ -0.14
C3orf49-202ENST00000491896 COG2Q14746 738 aa14.18□□□□□ -0.14
C3orf49-202ENST00000491896 IMMTQ16891 758 aaKnown RBP14.18□□□□□ -0.14
C3orf49-202ENST00000491896 GPRC5AQ8NFJ5 357 aa14.18□□□□□ -0.14
C3orf49-202ENST00000491896 SOCS4Q8WXH5 440 aa14.18□□□□□ -0.14
C3orf49-202ENST00000491896 CEP95Q96GE4 821 aa14.18□□□□□ -0.14
C3orf49-202ENST00000491896 HPS5Q9UPZ3 1129 aa14.18□□□□□ -0.14
C3orf49-202ENST00000491896 SPDYE16A6NNV3 312 aaPredicted RBP14.17□□□□□ -0.14
C3orf49-202ENST00000491896 ZNF213O14771 459 aa14.17□□□□□ -0.14
C3orf49-202ENST00000491896 PLA2G6O60733 806 aa14.17□□□□□ -0.14
C3orf49-202ENST00000491896 FDX1P10109 184 aa14.17□□□□□ -0.14
C3orf49-202ENST00000491896 COPB2P35606 906 aa14.17□□□□□ -0.14
C3orf49-202ENST00000491896 RCSD1Q6JBY9 416 aa14.17□□□□□ -0.14
C3orf49-202ENST00000491896 MFSD6Q6ZSS7 791 aa14.17□□□□□ -0.14
C3orf49-202ENST00000491896 NBPF11Q86T75 865 aa14.17□□□□□ -0.14
C3orf49-202ENST00000491896 ANKRD13CQ8N6S4 541 aa14.17□□□□□ -0.14
C3orf49-202ENST00000491896 SHCBP1Q8NEM2 672 aa14.17□□□□□ -0.14
C3orf49-202ENST00000491896 ESR2Q92731 530 aa14.17□□□□□ -0.14
C3orf49-202ENST00000491896 COA7Q96BR5 231 aa14.17□□□□□ -0.14
C3orf49-202ENST00000491896 GMCL1Q96IK5 515 aa14.17□□□□□ -0.14
C3orf49-202ENST00000491896 TTC14Q96N46 770 aa14.17□□□□□ -0.14
C3orf49-202ENST00000491896 P2RX7Q99572 595 aaKnown RBP14.17□□□□□ -0.14
C3orf49-202ENST00000491896 TNPO2O14787 897 aaKnown RBP14.16□□□□□ -0.14
C3orf49-202ENST00000491896 TFAP4Q01664 338 aa14.16□□□□□ -0.14
C3orf49-202ENST00000491896 ZYXQ15942 572 aaKnown RBP14.16□□□□□ -0.14
C3orf49-202ENST00000491896 CASC1Q6TDU7 716 aa14.16□□□□□ -0.14
C3orf49-202ENST00000491896 TRMT44Q8IYL2 757 aaKnown RBP14.16□□□□□ -0.14
C3orf49-202ENST00000491896 SLAIN1Q8ND83 568 aa14.16□□□□□ -0.14
C3orf49-202ENST00000491896 SP7Q8TDD2 431 aaPredicted RBP14.16□□□□□ -0.14
C3orf49-202ENST00000491896 PXYLP1Q8TE99 480 aa14.16□□□□□ -0.14
C3orf49-202ENST00000491896 TANGO6Q9C0B7 1094 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms