RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 CAPN6Q9Y6Q1 641 aa6.25□□□□□ -1.41
VTA1-204ENST00000491881 ETV2O00321 342 aaPredicted RBP6.24□□□□□ -1.41
VTA1-204ENST00000491881 CBX7O95931 251 aa6.24□□□□□ -1.41
VTA1-204ENST00000491881 F13A1P00488 732 aa6.24□□□□□ -1.41
VTA1-204ENST00000491881 PTPN11Q06124 597 aaPredicted RBP6.24□□□□□ -1.41
VTA1-204ENST00000491881 APOBRQ0VD83 1088 aa6.24□□□□□ -1.41
VTA1-204ENST00000491881 PAK2Q13177 524 aa6.24□□□□□ -1.41
VTA1-204ENST00000491881 ZNF746Q6NUN9 644 aaPredicted RBP6.24□□□□□ -1.41
VTA1-204ENST00000491881 FAM196AQ6ZSG2 479 aa6.24□□□□□ -1.41
VTA1-204ENST00000491881 MFSD2AQ8NA29 543 aa6.24□□□□□ -1.41
VTA1-204ENST00000491881 GPRASP2Q96D09 838 aa6.24□□□□□ -1.41
VTA1-204ENST00000491881 FBRSQ9HAH7 460 aa6.24□□□□□ -1.41
VTA1-204ENST00000491881 KCNQ5Q9NR82 932 aa6.24□□□□□ -1.41
VTA1-204ENST00000491881 ZSWIM5Q9P217 1185 aa6.24□□□□□ -1.41
VTA1-204ENST00000491881 NUAK1O60285 661 aa6.23□□□□□ -1.41
VTA1-204ENST00000491881 MED14OSP0DP75 135 aa6.23□□□□□ -1.41
VTA1-204ENST00000491881 GARTP22102 1010 aa6.23□□□□□ -1.41
VTA1-204ENST00000491881 GLDCP23378 1020 aa6.23□□□□□ -1.41
VTA1-204ENST00000491881 TNNI2P48788 182 aa6.23□□□□□ -1.41
VTA1-204ENST00000491881 CTSWP56202 376 aa6.23□□□□□ -1.41
VTA1-204ENST00000491881 RPL6Q02878 288 aaKnown RBP6.23□□□□□ -1.41
VTA1-204ENST00000491881 SLBPQ14493 270 aaKnown RBP eCLIP6.23□□□□□ -1.41
VTA1-204ENST00000491881 INPP5AQ14642 412 aa6.23□□□□□ -1.41
VTA1-204ENST00000491881 CWF19L2Q2TBE0 894 aaKnown RBP6.23□□□□□ -1.41
VTA1-204ENST00000491881 WIPI1Q5MNZ9 446 aaPredicted RBP6.23□□□□□ -1.41
VTA1-204ENST00000491881 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.23□□□□□ -1.41
VTA1-204ENST00000491881 HDXQ7Z353 690 aa6.23□□□□□ -1.41
VTA1-204ENST00000491881 KCNN1Q92952 543 aa6.23□□□□□ -1.41
VTA1-204ENST00000491881 C8orf37Q96NL8 207 aa6.23□□□□□ -1.41
VTA1-204ENST00000491881 UBP1Q9NZI7 540 aa6.23□□□□□ -1.41
VTA1-204ENST00000491881 SMG5Q9UPR3 1016 aaKnown RBP6.23□□□□□ -1.41
VTA1-204ENST00000491881 ROBO2Q9HCK4 1378 aa6.22□□□□□ -1.41
VTA1-204ENST00000491881 TLR3O15455 904 aaKnown RBP6.22□□□□□ -1.41
VTA1-204ENST00000491881 GREM1O60565 184 aa6.22□□□□□ -1.41
VTA1-204ENST00000491881 CILPO75339 1184 aa6.22□□□□□ -1.41
VTA1-204ENST00000491881 MPP2Q14168 576 aa6.22□□□□□ -1.41
VTA1-204ENST00000491881 NAALADL2Q58DX5 795 aa6.22□□□□□ -1.41
VTA1-204ENST00000491881 LETMD1Q6P1Q0 360 aa6.22□□□□□ -1.41
VTA1-204ENST00000491881 LRFN4Q6PJG9 635 aa6.22□□□□□ -1.41
VTA1-204ENST00000491881 VPS37DQ86XT2 251 aa6.22□□□□□ -1.41
VTA1-204ENST00000491881 RIN3Q8TB24 985 aa6.22□□□□□ -1.41
VTA1-204ENST00000491881 MYLIPQ8WY64 445 aa6.22□□□□□ -1.41
VTA1-204ENST00000491881 PLPPR2Q96GM1 343 aa6.22□□□□□ -1.41
VTA1-204ENST00000491881 SPATA32Q96LK8 384 aa6.22□□□□□ -1.41
VTA1-204ENST00000491881 SLC26A8Q96RN1 970 aa6.22□□□□□ -1.41
VTA1-204ENST00000491881 NT5C1AQ9BXI3 368 aa6.22□□□□□ -1.41
VTA1-204ENST00000491881 DNAJC25-GNG10A0A024R161 153 aa6.21□□□□□ -1.42
VTA1-204ENST00000491881 FAM221AA4D161 298 aa6.21□□□□□ -1.42
VTA1-204ENST00000491881 CYP7A1P22680 504 aa6.21□□□□□ -1.42
VTA1-204ENST00000491881 MCM4P33991 863 aa6.21□□□□□ -1.42
VTA1-204ENST00000491881 CRKP46108 304 aa6.21□□□□□ -1.42
VTA1-204ENST00000491881 HK2P52789 917 aa6.21□□□□□ -1.42
VTA1-204ENST00000491881 LINC00310P59036 64 aa6.21□□□□□ -1.42
VTA1-204ENST00000491881 ETF1P62495 437 aaKnown RBP6.21□□□□□ -1.42
VTA1-204ENST00000491881 NKG7Q16617 165 aa6.21□□□□□ -1.42
VTA1-204ENST00000491881 SEZ6Q53EL9 994 aa6.21□□□□□ -1.42
VTA1-204ENST00000491881 RALGPS1Q5JS13 557 aa6.21□□□□□ -1.42
VTA1-204ENST00000491881 FBXO27Q8NI29 283 aa6.21□□□□□ -1.42
VTA1-204ENST00000491881 NKD1Q969G9 470 aa6.21□□□□□ -1.42
VTA1-204ENST00000491881 EAF1Q96JC9 268 aaPredicted RBP6.21□□□□□ -1.42
VTA1-204ENST00000491881 TINF2Q9BSI4 451 aa6.21□□□□□ -1.42
VTA1-204ENST00000491881 WNT10AQ9GZT5 417 aa6.21□□□□□ -1.42
VTA1-204ENST00000491881 TMEM59LQ9UK28 342 aa6.21□□□□□ -1.42
VTA1-204ENST00000491881 SNCAIPQ9Y6H5 919 aa6.21□□□□□ -1.42
VTA1-204ENST00000491881 CAP2P40123 477 aa6.2□□□□□ -1.42
VTA1-204ENST00000491881 KIR3DL1P43629 444 aa6.2□□□□□ -1.42
VTA1-204ENST00000491881 GJA8P48165 433 aa6.2□□□□□ -1.42
VTA1-204ENST00000491881 ERVFC1P60507 584 aa6.2□□□□□ -1.42
VTA1-204ENST00000491881 REC114Q7Z4M0 266 aa6.2□□□□□ -1.42
VTA1-204ENST00000491881 HID1Q8IV36 788 aa6.2□□□□□ -1.42
VTA1-204ENST00000491881 XAGE3Q8WTP9 111 aa6.2□□□□□ -1.42
VTA1-204ENST00000491881 COX4I2Q96KJ9 171 aa6.2□□□□□ -1.42
VTA1-204ENST00000491881 LRRC3Q9BY71 257 aa6.2□□□□□ -1.42
VTA1-204ENST00000491881 CDK8P49336 464 aa6.19□□□□□ -1.42
VTA1-204ENST00000491881 TNK2Q07912 1038 aa6.19□□□□□ -1.42
VTA1-204ENST00000491881 TMPRSS7Q7RTY8 843 aa6.19□□□□□ -1.42
VTA1-204ENST00000491881 KRTAP9-3Q9BYQ3 159 aa6.19□□□□□ -1.42
VTA1-204ENST00000491881 IRF2BPLQ9H1B7 796 aa6.19□□□□□ -1.42
VTA1-204ENST00000491881 GRIN3BO60391 1043 aa6.18□□□□□ -1.42
VTA1-204ENST00000491881 HPXP02790 462 aa6.18□□□□□ -1.42
VTA1-204ENST00000491881 ESR1P03372 595 aa6.18□□□□□ -1.42
VTA1-204ENST00000491881 HOXA5P20719 270 aa6.18□□□□□ -1.42
VTA1-204ENST00000491881 DNAJA1P31689 397 aaKnown RBP6.18□□□□□ -1.42
VTA1-204ENST00000491881 ZNF165P49910 485 aa6.18□□□□□ -1.42
VTA1-204ENST00000491881 ARID5AQ03989 594 aa6.18□□□□□ -1.42
VTA1-204ENST00000491881 PDE4BQ07343 736 aa6.18□□□□□ -1.42
VTA1-204ENST00000491881 PRAMEF13Q5VWM6 474 aa6.18□□□□□ -1.42
VTA1-204ENST00000491881 RASGRP4Q8TDF6 673 aa6.18□□□□□ -1.42
VTA1-204ENST00000491881 ADAMTS10Q9H324 1103 aa6.18□□□□□ -1.42
VTA1-204ENST00000491881 EFR3BQ9Y2G0 817 aa6.18□□□□□ -1.42
VTA1-204ENST00000491881 GFRA2O00451 464 aa6.17□□□□□ -1.42
VTA1-204ENST00000491881 CST3P01034 146 aaPredicted RBP6.17□□□□□ -1.42
VTA1-204ENST00000491881 COL9A2Q14055 689 aaPredicted RBP6.17□□□□□ -1.42
VTA1-204ENST00000491881 GK5Q6ZS86 529 aa6.17□□□□□ -1.42
VTA1-204ENST00000491881 CDH24Q86UP0 819 aa6.17□□□□□ -1.42
VTA1-204ENST00000491881 CREG2Q8IUH2 290 aa6.17□□□□□ -1.42
VTA1-204ENST00000491881 SLITRK4Q8IW52 837 aa6.17□□□□□ -1.42
VTA1-204ENST00000491881 SLC43A3Q8NBI5 491 aa6.17□□□□□ -1.42
VTA1-204ENST00000491881 C20orf173Q96LM9 149 aa6.17□□□□□ -1.42
VTA1-204ENST00000491881 BRMS1Q9HCU9 246 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms