RNA–Protein interactions for RNA: ENST00000491802.1

CPNE9-204, Transcript of copine family member 9, humanhuman

TSL 4

Gene CPNE9, Length 584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-204ENST00000491802 VCPKMTQ9H867 229 aa27.55■■■□□ 2
CPNE9-204ENST00000491802 CTNNA3Q9UI47 895 aa27.55■■■□□ 2
CPNE9-204ENST00000491802 HPS5Q9UPZ3 1129 aa27.55■■■□□ 2
CPNE9-204ENST00000491802 USP17L15C9J2P7 530 aa27.54■■■□□ 2
CPNE9-204ENST00000491802 USP17L13C9JLJ4 530 aa27.54■■■□□ 2
CPNE9-204ENST00000491802 USP17L11C9JVI0 530 aa27.54■■■□□ 2
CPNE9-204ENST00000491802 USP17L18D6R9N7 530 aa27.54■■■□□ 2
CPNE9-204ENST00000491802 USP17L22D6RA61 530 aa27.54■■■□□ 2
CPNE9-204ENST00000491802 USP17L17D6RBQ6 530 aa27.54■■■□□ 2
CPNE9-204ENST00000491802 USP17L19D6RCP7 530 aa27.54■■■□□ 2
CPNE9-204ENST00000491802 USP17L20D6RJB6 530 aa27.54■■■□□ 2
CPNE9-204ENST00000491802 RANBP6O60518 1105 aaKnown RBP27.54■■■□□ 2
CPNE9-204ENST00000491802 FGRP09769 529 aa27.54■■■□□ 2
CPNE9-204ENST00000491802 USP17L24Q0WX57 530 aa27.54■■■□□ 2
CPNE9-204ENST00000491802 KIAA1755Q5JYT7 1200 aa27.54■■■□□ 2
CPNE9-204ENST00000491802 STAG1Q8WVM7 1258 aa27.54■■■□□ 2
CPNE9-204ENST00000491802 LPAR1Q92633 364 aa27.54■■■□□ 2
CPNE9-204ENST00000491802 NYAP2Q9P242 653 aa27.54■■■□□ 2
CPNE9-204ENST00000491802 MORF4L1Q9UBU8 362 aa27.54■■■□□ 2
CPNE9-204ENST00000491802 HERVK_113P62684 666 aa27.53■■■□□ 2
CPNE9-204ENST00000491802 IMMTQ16891 758 aaKnown RBP27.53■■■□□ 2
CPNE9-204ENST00000491802 AKNAD1Q5T1N1 836 aa27.53■■■□□ 2
CPNE9-204ENST00000491802 SPICE1Q8N0Z3 855 aa27.53■■■□□ 2
CPNE9-204ENST00000491802 ANKRD13CQ8N6S4 541 aa27.53■■■□□ 2
CPNE9-204ENST00000491802 P2RX7Q99572 595 aaKnown RBP27.53■■■□□ 2
CPNE9-204ENST00000491802 ARHGAP39Q9C0H5 1083 aa27.53■■■□□ 2
CPNE9-204ENST00000491802 RNF41Q9H4P4 317 aaPredicted RBP27.53■■■□□ 2
CPNE9-204ENST00000491802 MTMR4Q9NYA4 1195 aa27.53■■■□□ 2
CPNE9-204ENST00000491802 ECM2O94769 699 aaPredicted RBP27.52■■■□□ 2
CPNE9-204ENST00000491802 PCP11498 1178 aaKnown RBP27.52■■■□□ 2
CPNE9-204ENST00000491802 CTGFP29279 349 aa27.52■■■□□ 2
CPNE9-204ENST00000491802 PSMC4P43686 418 aa27.52■■■□□ 2
CPNE9-204ENST00000491802 PTH1RQ03431 593 aa27.52■■■□□ 2
CPNE9-204ENST00000491802 CATSPERGQ6ZRH7 1159 aa27.52■■■□□ 2
CPNE9-204ENST00000491802 MFSD6Q6ZSS7 791 aa27.52■■■□□ 2
CPNE9-204ENST00000491802 GOPCQ9HD26 462 aa27.52■■■□□ 2
CPNE9-204ENST00000491802 RLFQ13129 1914 aa27.51■■■□□ 2
CPNE9-204ENST00000491802 NEDD4P46934 1319 aa27.51■■□□□ 1.99
CPNE9-204ENST00000491802 TTLL1O95922 423 aa27.51■■□□□ 1.99
CPNE9-204ENST00000491802 LBX2Q6XYB7 198 aa27.51■■□□□ 1.99
CPNE9-204ENST00000491802 TRIM47Q96LD4 638 aa27.51■■□□□ 1.99
CPNE9-204ENST00000491802 ESYT1Q9BSJ8 1104 aa27.51■■□□□ 1.99
CPNE9-204ENST00000491802 TANGO6Q9C0B7 1094 aa27.51■■□□□ 1.99
CPNE9-204ENST00000491802 CLIP2Q9UDT6 1046 aa27.51■■□□□ 1.99
CPNE9-204ENST00000491802 MYH4Q9Y623 1939 aa27.51■■□□□ 1.99
CPNE9-204ENST00000491802 PARP14Q460N5 1801 aa27.51■■□□□ 1.99
CPNE9-204ENST00000491802 RAD21O60216 631 aa27.5■■□□□ 1.99
CPNE9-204ENST00000491802 HOXD10P28358 340 aa27.5■■□□□ 1.99
CPNE9-204ENST00000491802 FCGRTP55899 365 aa27.5■■□□□ 1.99
CPNE9-204ENST00000491802 SYNPO2Q9UMS6 1093 aa27.5■■□□□ 1.99
CPNE9-204ENST00000491802 DOCK3Q8IZD9 2030 aa27.5■■□□□ 1.99
CPNE9-204ENST00000491802 WDR46O15213 610 aaKnown RBP27.49■■□□□ 1.99
CPNE9-204ENST00000491802 NMT2O60551 498 aa27.49■■□□□ 1.99
CPNE9-204ENST00000491802 CDC45O75419 566 aa27.49■■□□□ 1.99
CPNE9-204ENST00000491802 LRRC47Q8N1G4 583 aaKnown RBP27.49■■□□□ 1.99
CPNE9-204ENST00000491802 SRRDQ9UH36 339 aa27.49■■□□□ 1.99
CPNE9-204ENST00000491802 U3KPZ7 1027 aaPredicted RBP27.49■■□□□ 1.99
CPNE9-204ENST00000491802 IL17RBQ9NRM6 502 aa27.48■■□□□ 1.99
CPNE9-204ENST00000491802 A0A0G2JMZ2 1700 aa27.47■■□□□ 1.99
CPNE9-204ENST00000491802 FMNL1O95466 1100 aaPredicted RBP27.47■■□□□ 1.99
CPNE9-204ENST00000491802 PPP4R3BQ5MIZ7 849 aa27.47■■□□□ 1.99
CPNE9-204ENST00000491802 CASC1Q6TDU7 716 aa27.47■■□□□ 1.99
CPNE9-204ENST00000491802 STX8Q9UNK0 236 aa27.47■■□□□ 1.99
CPNE9-204ENST00000491802 F5H6K3 240 aa27.46■■□□□ 1.99
CPNE9-204ENST00000491802 PEX10O60683 326 aa27.46■■□□□ 1.99
CPNE9-204ENST00000491802 NDUFB10O96000 172 aa27.46■■□□□ 1.99
CPNE9-204ENST00000491802 KLRC3Q07444 240 aa27.46■■□□□ 1.99
CPNE9-204ENST00000491802 KIAA1211Q6ZU35 1233 aa27.46■■□□□ 1.99
CPNE9-204ENST00000491802 ESR2Q92731 530 aa27.46■■□□□ 1.99
CPNE9-204ENST00000491802 MKL1Q969V6 931 aa27.46■■□□□ 1.99
CPNE9-204ENST00000491802 ARMC5Q96C12 935 aa27.46■■□□□ 1.99
CPNE9-204ENST00000491802 PAGR1Q9BTK6 254 aa27.46■■□□□ 1.99
CPNE9-204ENST00000491802 TXNRD2Q9NNW7 524 aa27.46■■□□□ 1.99
CPNE9-204ENST00000491802 RBPJLQ9UBG7 517 aa27.46■■□□□ 1.99
CPNE9-204ENST00000491802 CCDC85CA6NKD9 419 aa27.45■■□□□ 1.98
CPNE9-204ENST00000491802 SPDYE16A6NNV3 312 aaPredicted RBP27.45■■□□□ 1.98
CPNE9-204ENST00000491802 FAM83BQ5T0W9 1011 aa27.45■■□□□ 1.98
CPNE9-204ENST00000491802 POTEEQ6S8J3 1075 aa27.45■■□□□ 1.98
CPNE9-204ENST00000491802 GPRC5AQ8NFJ5 357 aa27.45■■□□□ 1.98
CPNE9-204ENST00000491802 NKX2-3Q8TAU0 364 aa27.45■■□□□ 1.98
CPNE9-204ENST00000491802 RABGAP1Q9Y3P9 1069 aa27.45■■□□□ 1.98
CPNE9-204ENST00000491802 PTCH2Q9Y6C5 1203 aa27.45■■□□□ 1.98
CPNE9-204ENST00000491802 RBBP6Q7Z6E9 1792 aaKnown RBP27.45■■□□□ 1.98
CPNE9-204ENST00000491802 MYPNQ86TC9 1320 aa27.44■■□□□ 1.98
CPNE9-204ENST00000491802 FLOT1O75955 427 aa27.44■■□□□ 1.98
CPNE9-204ENST00000491802 NT5C2P49902 561 aa27.44■■□□□ 1.98
CPNE9-204ENST00000491802 GMCL1P1Q8NEA9 526 aa27.44■■□□□ 1.98
CPNE9-204ENST00000491802 MAP4K1Q92918 833 aa27.44■■□□□ 1.98
CPNE9-204ENST00000491802 NUP88Q99567 741 aaPredicted RBP27.44■■□□□ 1.98
CPNE9-204ENST00000491802 LSG1Q9H089 658 aaKnown RBP27.44■■□□□ 1.98
CPNE9-204ENST00000491802 ANO2Q9NQ90 1003 aa27.44■■□□□ 1.98
CPNE9-204ENST00000491802 HOXC10Q9NYD6 342 aa27.44■■□□□ 1.98
CPNE9-204ENST00000491802 RBM8AQ9Y5S9 174 aaKnown RBP27.44■■□□□ 1.98
CPNE9-204ENST00000491802 B4E1Z4 1266 aa27.43■■□□□ 1.98
CPNE9-204ENST00000491802 CYP21A2P08686 494 aa27.43■■□□□ 1.98
CPNE9-204ENST00000491802 COG2Q14746 738 aa27.43■■□□□ 1.98
CPNE9-204ENST00000491802 TNPO2O14787 897 aaKnown RBP27.42■■□□□ 1.98
CPNE9-204ENST00000491802 KDM4AO75164 1064 aa27.42■■□□□ 1.98
CPNE9-204ENST00000491802 CAPN15O75808 1086 aa27.42■■□□□ 1.98
CPNE9-204ENST00000491802 NOVP48745 357 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms