RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 CWC22Q9HCG8 908 aaKnown RBP16.16■□□□□ 0.18
USF1-206ENST00000491629 ATP11BQ9Y2G3 1177 aa16.16■□□□□ 0.18
USF1-206ENST00000491629 MSCO60682 206 aa16.15■□□□□ 0.18
USF1-206ENST00000491629 IGSF3O75054 1194 aa16.15■□□□□ 0.18
USF1-206ENST00000491629 SURF6O75683 361 aaKnown RBP16.15■□□□□ 0.18
USF1-206ENST00000491629 USP5P45974 858 aa16.15■□□□□ 0.18
USF1-206ENST00000491629 GABPAQ06546 454 aa16.15■□□□□ 0.18
USF1-206ENST00000491629 SEPT2Q15019 361 aa16.15■□□□□ 0.18
USF1-206ENST00000491629 SNX17Q15036 470 aa16.15■□□□□ 0.18
USF1-206ENST00000491629 FRAT1Q92837 279 aaPredicted RBP16.15■□□□□ 0.18
USF1-206ENST00000491629 SEMA6BQ9H3T3 888 aa16.15■□□□□ 0.18
USF1-206ENST00000491629 NOP58Q9Y2X3 529 aaKnown RBP16.15■□□□□ 0.18
USF1-206ENST00000491629 TRIM43BA6NCK2 446 aa16.14■□□□□ 0.17
USF1-206ENST00000491629 ITGB8P26012 769 aa16.14■□□□□ 0.17
USF1-206ENST00000491629 ADORA2AP29274 412 aa16.14■□□□□ 0.17
USF1-206ENST00000491629 PRAMEF19Q5SWL8 479 aa16.14■□□□□ 0.17
USF1-206ENST00000491629 ZNF697Q5TEC3 545 aa16.14■□□□□ 0.17
USF1-206ENST00000491629 BADQ92934 168 aa16.14■□□□□ 0.17
USF1-206ENST00000491629 TRIM43Q96BQ3 446 aaPredicted RBP16.14■□□□□ 0.17
USF1-206ENST00000491629 PDLIM7Q9NR12 457 aa16.14■□□□□ 0.17
USF1-206ENST00000491629 IVNS1ABPQ9Y6Y0 642 aa16.14■□□□□ 0.17
USF1-206ENST00000491629 CHD9Q3L8U1 2897 aa16.13■□□□□ 0.17
USF1-206ENST00000491629 IPO8O15397 1037 aaKnown RBP16.13■□□□□ 0.17
USF1-206ENST00000491629 OS9Q13438 667 aaPredicted RBP16.13■□□□□ 0.17
USF1-206ENST00000491629 TRIM60Q495X7 471 aa16.13■□□□□ 0.17
USF1-206ENST00000491629 OLFML2BQ68BL8 750 aa16.13■□□□□ 0.17
USF1-206ENST00000491629 SPATC1LQ9H0A9 340 aa16.13■□□□□ 0.17
USF1-206ENST00000491629 MCM3APO60318 1980 aa16.13■□□□□ 0.17
USF1-206ENST00000491629 MYH7P12883 1935 aa16.12■□□□□ 0.17
USF1-206ENST00000491629 ERCC3P19447 782 aa16.12■□□□□ 0.17
USF1-206ENST00000491629 LRRC41Q15345 812 aa16.12■□□□□ 0.17
USF1-206ENST00000491629 TTC6Q86TZ1 520 aa16.12■□□□□ 0.17
USF1-206ENST00000491629 SIAH1Q8IUQ4 282 aa16.12■□□□□ 0.17
USF1-206ENST00000491629 SEPT4O43236 478 aa16.11■□□□□ 0.17
USF1-206ENST00000491629 ADCYAP1R1P41586 468 aa16.11■□□□□ 0.17
USF1-206ENST00000491629 EPHB4P54760 987 aa16.11■□□□□ 0.17
USF1-206ENST00000491629 COG2Q14746 738 aa16.11■□□□□ 0.17
USF1-206ENST00000491629 DPP9Q86TI2 863 aa16.11■□□□□ 0.17
USF1-206ENST00000491629 CLEC10AQ8IUN9 316 aa16.11■□□□□ 0.17
USF1-206ENST00000491629 ARRDC4Q8NCT1 418 aa16.11■□□□□ 0.17
USF1-206ENST00000491629 MAFAQ8NHW3 353 aaPredicted RBP16.11■□□□□ 0.17
USF1-206ENST00000491629 MYLIPQ8WY64 445 aa16.11■□□□□ 0.17
USF1-206ENST00000491629 FERMT2Q96AC1 680 aa16.11■□□□□ 0.17
USF1-206ENST00000491629 CABP5Q9NP86 173 aa16.11■□□□□ 0.17
USF1-206ENST00000491629 PRDM5Q9NQX1 630 aaPredicted RBP16.11■□□□□ 0.17
USF1-206ENST00000491629 PRKAG2Q9UGJ0 569 aa16.11■□□□□ 0.17
USF1-206ENST00000491629 NCOR1O75376 2440 aa16.11■□□□□ 0.17
USF1-206ENST00000491629 REV3LO60673 3130 aa16.11■□□□□ 0.17
USF1-206ENST00000491629 SMIM22K7EJ46 135 aa16.1■□□□□ 0.17
USF1-206ENST00000491629 STRNO43815 780 aa16.1■□□□□ 0.17
USF1-206ENST00000491629 CYP2D6P10635 497 aa16.1■□□□□ 0.17
USF1-206ENST00000491629 RLBP1P12271 317 aa16.1■□□□□ 0.17
USF1-206ENST00000491629 FAM47AQ5JRC9 791 aa16.1■□□□□ 0.17
USF1-206ENST00000491629 SLC44A5Q8NCS7 719 aa16.1■□□□□ 0.17
USF1-206ENST00000491629 SHCBP1Q8NEM2 672 aa16.1■□□□□ 0.17
USF1-206ENST00000491629 KBTBD13C9JR72 458 aa16.09■□□□□ 0.17
USF1-206ENST00000491629 DSG3P32926 999 aa16.09■□□□□ 0.17
USF1-206ENST00000491629 SMAD3P84022 425 aaKnown RBP16.09■□□□□ 0.17
USF1-206ENST00000491629 C1orf53Q5VUE5 145 aa16.09■□□□□ 0.17
USF1-206ENST00000491629 CERS3Q8IU89 383 aa16.09■□□□□ 0.17
USF1-206ENST00000491629 ATG4CQ96DT6 458 aa16.09■□□□□ 0.17
USF1-206ENST00000491629 MAML3Q96JK9 1138 aa16.09■□□□□ 0.17
USF1-206ENST00000491629 HOXC10Q9NYD6 342 aa16.09■□□□□ 0.17
USF1-206ENST00000491629 GBF1Q92538 1859 aa16.09■□□□□ 0.17
USF1-206ENST00000491629 GREB1LQ9C091 1923 aaPredicted RBP16.09■□□□□ 0.17
USF1-206ENST00000491629 POLR3DP05423 398 aaPredicted RBP16.08■□□□□ 0.16
USF1-206ENST00000491629 TLE2Q04725 743 aa16.08■□□□□ 0.16
USF1-206ENST00000491629 MAP3K12Q12852 859 aa16.08■□□□□ 0.16
USF1-206ENST00000491629 SDR42E1Q8WUS8 393 aa16.08■□□□□ 0.16
USF1-206ENST00000491629 TANGO6Q9C0B7 1094 aa16.08■□□□□ 0.16
USF1-206ENST00000491629 CHD7Q9P2D1 2997 aa16.07■□□□□ 0.16
USF1-206ENST00000491629 MAGEB6P1A0A0J9YX57 407 aa16.07■□□□□ 0.16
USF1-206ENST00000491629 TCRBV5S4A2TA0A5A2 114 aa16.07■□□□□ 0.16
USF1-206ENST00000491629 MYCNP04198 464 aaPredicted RBP16.07■□□□□ 0.16
USF1-206ENST00000491629 PDE6AP16499 860 aa16.07■□□□□ 0.16
USF1-206ENST00000491629 TAL1P17542 331 aaPredicted RBP16.07■□□□□ 0.16
USF1-206ENST00000491629 ZKSCAN2Q63HK3 967 aa16.07■□□□□ 0.16
USF1-206ENST00000491629 DYNLL2Q96FJ2 89 aa16.07■□□□□ 0.16
USF1-206ENST00000491629 DCP1AQ9NPI6 582 aaPredicted RBP16.07■□□□□ 0.16
USF1-206ENST00000491629 PHF24Q9UPV7 400 aa16.07■□□□□ 0.16
USF1-206ENST00000491629 BDP1A6H8Y1 2624 aa16.07■□□□□ 0.16
USF1-206ENST00000491629 MPHOSPH10O00566 681 aaKnown RBP16.06■□□□□ 0.16
USF1-206ENST00000491629 AKR1B1P15121 316 aa16.06■□□□□ 0.16
USF1-206ENST00000491629 TMEM132BQ14DG7 1078 aa16.06■□□□□ 0.16
USF1-206ENST00000491629 SLFNL1Q499Z3 407 aa16.06■□□□□ 0.16
USF1-206ENST00000491629 NCAPG2Q86XI2 1143 aa16.06■□□□□ 0.16
USF1-206ENST00000491629 ABRAQ8N0Z2 381 aa16.06■□□□□ 0.16
USF1-206ENST00000491629 SPICE1Q8N0Z3 855 aa16.06■□□□□ 0.16
USF1-206ENST00000491629 LCORLQ8N3X6 602 aa16.06■□□□□ 0.16
USF1-206ENST00000491629 LENG1Q96BZ8 264 aaPredicted RBP16.06■□□□□ 0.16
USF1-206ENST00000491629 MROH8Q9H579 483 aa16.06■□□□□ 0.16
USF1-206ENST00000491629 MCM9Q9NXL9 1143 aa16.06■□□□□ 0.16
USF1-206ENST00000491629 ADAMTS5Q9UNA0 930 aa16.06■□□□□ 0.16
USF1-206ENST00000491629 EXOC6BQ9Y2D4 811 aa16.06■□□□□ 0.16
USF1-206ENST00000491629 ZNF532Q9HCE3 1301 aa16.05■□□□□ 0.16
USF1-206ENST00000491629 FLOT1O75955 427 aa16.05■□□□□ 0.16
USF1-206ENST00000491629 PGK1P00558 417 aa16.05■□□□□ 0.16
USF1-206ENST00000491629 PGK2P07205 417 aa16.05■□□□□ 0.16
USF1-206ENST00000491629 PLS1Q14651 629 aa16.05■□□□□ 0.16
USF1-206ENST00000491629 SLC9C2Q5TAH2 1124 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms