RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 IPO9Q96P70 1041 aaKnown RBP25.43■■□□□ 1.66
VCPKMT-204ENST00000491402 SLKQ9H2G2 1235 aaPredicted RBP25.43■■□□□ 1.66
VCPKMT-204ENST00000491402 PFKFB2O60825 505 aa25.42■■□□□ 1.66
VCPKMT-204ENST00000491402 RXRAP19793 462 aa25.42■■□□□ 1.66
VCPKMT-204ENST00000491402 SLC4A3P48751 1232 aa25.42■■□□□ 1.66
VCPKMT-204ENST00000491402 TROAPQ12815 778 aa25.42■■□□□ 1.66
VCPKMT-204ENST00000491402 LRRC47Q8N1G4 583 aaKnown RBP25.42■■□□□ 1.66
VCPKMT-204ENST00000491402 NECAB1Q8N987 351 aa25.42■■□□□ 1.66
VCPKMT-204ENST00000491402 DDAH1O94760 285 aa25.41■■□□□ 1.66
VCPKMT-204ENST00000491402 RCAN1P53805 252 aa25.41■■□□□ 1.66
VCPKMT-204ENST00000491402 VGLL4Q14135 290 aa25.41■■□□□ 1.66
VCPKMT-204ENST00000491402 NOL9Q5SY16 702 aaKnown RBP25.41■■□□□ 1.66
VCPKMT-204ENST00000491402 GTF3C6Q969F1 213 aa25.41■■□□□ 1.66
VCPKMT-204ENST00000491402 METAP2P50579 478 aaKnown RBP eCLIP25.41■■□□□ 1.66
VCPKMT-204ENST00000491402 ST3GAL1Q11201 340 aa25.41■■□□□ 1.66
VCPKMT-204ENST00000491402 SCRN1Q12765 414 aa25.41■■□□□ 1.66
VCPKMT-204ENST00000491402 NUP133Q8WUM0 1156 aa25.41■■□□□ 1.66
VCPKMT-204ENST00000491402 MKL1Q969V6 931 aa25.41■■□□□ 1.66
VCPKMT-204ENST00000491402 PICK1Q9NRD5 415 aa25.41■■□□□ 1.66
VCPKMT-204ENST00000491402 NID2Q14112 1375 aa25.4■■□□□ 1.66
VCPKMT-204ENST00000491402 PHIPQ8WWQ0 1821 aa25.4■■□□□ 1.66
VCPKMT-204ENST00000491402 CCT2P78371 535 aaKnown RBP25.4■■□□□ 1.66
VCPKMT-204ENST00000491402 CUL4AQ13619 759 aa25.4■■□□□ 1.66
VCPKMT-204ENST00000491402 CCDC84Q86UT8 332 aaPredicted RBP25.4■■□□□ 1.66
VCPKMT-204ENST00000491402 CCDC83Q8IWF9 413 aa25.4■■□□□ 1.66
VCPKMT-204ENST00000491402 ARHGEF10LQ9HCE6 1279 aa25.4■■□□□ 1.66
VCPKMT-204ENST00000491402 CSADQ9Y600 493 aa25.4■■□□□ 1.66
VCPKMT-204ENST00000491402 CALM1P0DP23 149 aa25.39■■□□□ 1.66
VCPKMT-204ENST00000491402 CALM2P0DP24 149 aa25.39■■□□□ 1.66
VCPKMT-204ENST00000491402 CALM3P0DP25 149 aa25.39■■□□□ 1.66
VCPKMT-204ENST00000491402 CCDC144CPQ8IYA2 1237 aa25.39■■□□□ 1.66
VCPKMT-204ENST00000491402 SLC10A4Q96EP9 437 aa25.39■■□□□ 1.66
VCPKMT-204ENST00000491402 ELP3Q9H9T3 547 aa25.39■■□□□ 1.66
VCPKMT-204ENST00000491402 NCOA5Q9HCD5 579 aaKnown RBP25.39■■□□□ 1.66
VCPKMT-204ENST00000491402 A0A1W2PRG0 241 aa25.39■■□□□ 1.65
VCPKMT-204ENST00000491402 GOLGA8AA7E2F4 631 aa25.39■■□□□ 1.65
VCPKMT-204ENST00000491402 USP17L5A8MUK1 530 aa25.39■■□□□ 1.65
VCPKMT-204ENST00000491402 PTPRAP18433 802 aa25.39■■□□□ 1.65
VCPKMT-204ENST00000491402 ECE1P42892 770 aa25.39■■□□□ 1.65
VCPKMT-204ENST00000491402 DAXXQ9UER7 740 aaPredicted RBP25.39■■□□□ 1.65
VCPKMT-204ENST00000491402 SYNPO2Q9UMS6 1093 aa25.39■■□□□ 1.65
VCPKMT-204ENST00000491402 UNCXA6NJT0 531 aa25.38■■□□□ 1.65
VCPKMT-204ENST00000491402 ZNF157P51786 506 aaPredicted RBP25.38■■□□□ 1.65
VCPKMT-204ENST00000491402 RGMBQ6NW40 437 aa25.38■■□□□ 1.65
VCPKMT-204ENST00000491402 FANCBQ8NB91 859 aa25.38■■□□□ 1.65
VCPKMT-204ENST00000491402 ACER1Q8TDN7 264 aa25.38■■□□□ 1.65
VCPKMT-204ENST00000491402 SNCAIPQ9Y6H5 919 aa25.38■■□□□ 1.65
VCPKMT-204ENST00000491402 HSP90AA1P07900 732 aaKnown RBP25.37■■□□□ 1.65
VCPKMT-204ENST00000491402 DEFB115Q30KQ5 88 aa25.37■■□□□ 1.65
VCPKMT-204ENST00000491402 MTMR7Q9Y216 660 aa25.37■■□□□ 1.65
VCPKMT-204ENST00000491402 CDC27P30260 824 aa25.36■■□□□ 1.65
VCPKMT-204ENST00000491402 RTN1Q16799 776 aa25.36■■□□□ 1.65
VCPKMT-204ENST00000491402 PAXIP1Q6ZW49 1069 aaPredicted RBP25.36■■□□□ 1.65
VCPKMT-204ENST00000491402 RASGRP2Q7LDG7 609 aa25.36■■□□□ 1.65
VCPKMT-204ENST00000491402 MAP3K14Q99558 947 aa25.36■■□□□ 1.65
VCPKMT-204ENST00000491402 FAM217BQ9NTX9 383 aaPredicted RBP25.36■■□□□ 1.65
VCPKMT-204ENST00000491402 TMX2Q9Y320 296 aa25.36■■□□□ 1.65
VCPKMT-204ENST00000491402 GMCL1P1Q8NEA9 526 aa25.36■■□□□ 1.65
VCPKMT-204ENST00000491402 CTCFLQ8NI51 663 aaPredicted RBP25.36■■□□□ 1.65
VCPKMT-204ENST00000491402 CNKSR2Q8WXI2 1034 aa25.36■■□□□ 1.65
VCPKMT-204ENST00000491402 RASSF10A6NK89 507 aa25.35■■□□□ 1.65
VCPKMT-204ENST00000491402 PDHBP11177 359 aa25.35■■□□□ 1.65
VCPKMT-204ENST00000491402 PPP2R5BQ15173 497 aa25.35■■□□□ 1.65
VCPKMT-204ENST00000491402 HHIPL1Q96JK4 782 aa25.35■■□□□ 1.65
VCPKMT-204ENST00000491402 SH2D4AQ9H788 454 aa25.35■■□□□ 1.65
VCPKMT-204ENST00000491402 DHX16O60231 1041 aaKnown RBP25.34■■□□□ 1.65
VCPKMT-204ENST00000491402 SNHG28P0DPA3 235 aa25.34■■□□□ 1.65
VCPKMT-204ENST00000491402 ADD1P35611 737 aaKnown RBP25.34■■□□□ 1.65
VCPKMT-204ENST00000491402 GRM1Q13255 1194 aa25.34■■□□□ 1.65
VCPKMT-204ENST00000491402 GRM4Q14833 912 aa25.34■■□□□ 1.65
VCPKMT-204ENST00000491402 CYP4F22Q6NT55 531 aa25.34■■□□□ 1.65
VCPKMT-204ENST00000491402 SPRYD3Q8NCJ5 442 aa25.34■■□□□ 1.65
VCPKMT-204ENST00000491402 CHMP4CQ96CF2 233 aa25.34■■□□□ 1.65
VCPKMT-204ENST00000491402 INTS4Q96HW7 963 aaKnown RBP25.34■■□□□ 1.65
VCPKMT-204ENST00000491402 AS3MTQ9HBK9 375 aa25.34■■□□□ 1.65
VCPKMT-204ENST00000491402 FOXD4L1Q9NU39 408 aa25.34■■□□□ 1.65
VCPKMT-204ENST00000491402 ZHX2Q9Y6X8 837 aa25.34■■□□□ 1.65
VCPKMT-204ENST00000491402 CCDC196A0A1B0GTZ2 297 aa25.33■■□□□ 1.65
VCPKMT-204ENST00000491402 KIF5BP33176 963 aa25.33■■□□□ 1.65
VCPKMT-204ENST00000491402 FEZ1Q99689 392 aa25.33■■□□□ 1.65
VCPKMT-204ENST00000491402 WDR18Q9BV38 432 aa25.33■■□□□ 1.65
VCPKMT-204ENST00000491402 RBM28Q9NW13 759 aaKnown RBP25.33■■□□□ 1.65
VCPKMT-204ENST00000491402 F5H6K3 240 aa25.33■■□□□ 1.65
VCPKMT-204ENST00000491402 CPLX1O14810 134 aa25.33■■□□□ 1.65
VCPKMT-204ENST00000491402 RAD21O60216 631 aa25.33■■□□□ 1.65
VCPKMT-204ENST00000491402 KLRC3Q07444 240 aa25.33■■□□□ 1.65
VCPKMT-204ENST00000491402 ZNF280CQ8ND82 737 aa25.33■■□□□ 1.65
VCPKMT-204ENST00000491402 OPTNQ96CV9 577 aa25.33■■□□□ 1.65
VCPKMT-204ENST00000491402 GOPCQ9HD26 462 aa25.33■■□□□ 1.65
VCPKMT-204ENST00000491402 MAD2L2Q9UI95 211 aa25.33■■□□□ 1.65
VCPKMT-204ENST00000491402 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.33■■□□□ 1.65
VCPKMT-204ENST00000491402 MKRN3Q13064 507 aaKnown RBP25.32■■□□□ 1.64
VCPKMT-204ENST00000491402 SPP2Q13103 211 aa25.32■■□□□ 1.64
VCPKMT-204ENST00000491402 USP17L2Q6R6M4 530 aa25.32■■□□□ 1.64
VCPKMT-204ENST00000491402 OTUD5Q96G74 571 aa25.32■■□□□ 1.64
VCPKMT-204ENST00000491402 KIAA1683Q9H0B3 1180 aa25.32■■□□□ 1.64
VCPKMT-204ENST00000491402 PTPRFP10586 1907 aa25.32■■□□□ 1.64
VCPKMT-204ENST00000491402 CTDNEP1O95476 244 aa25.31■■□□□ 1.64
VCPKMT-204ENST00000491402 NDUFB10O96000 172 aa25.31■■□□□ 1.64
VCPKMT-204ENST00000491402 PARP1P09874 1014 aaKnown RBP25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms