RNA–Protein interactions for RNA: ENST00000491390.1

NCSTN-214, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-214ENST00000491390 SSH3Q8TE77 659 aa13.55□□□□□ -0.24
NCSTN-214ENST00000491390 ANTXR1Q9H6X2 564 aa13.55□□□□□ -0.24
NCSTN-214ENST00000491390 SLC15A5A6NIM6 579 aa13.54□□□□□ -0.24
NCSTN-214ENST00000491390 RLBP1P12271 317 aa13.54□□□□□ -0.24
NCSTN-214ENST00000491390 CYP2C19P33261 490 aa13.54□□□□□ -0.24
NCSTN-214ENST00000491390 EVX2Q03828 476 aa13.54□□□□□ -0.24
NCSTN-214ENST00000491390 TLE2Q04725 743 aa13.54□□□□□ -0.24
NCSTN-214ENST00000491390 GRB14Q14449 540 aa13.54□□□□□ -0.24
NCSTN-214ENST00000491390 RASIP1Q5U651 963 aa13.54□□□□□ -0.24
NCSTN-214ENST00000491390 ZKSCAN2Q63HK3 967 aa13.54□□□□□ -0.24
NCSTN-214ENST00000491390 FOXP4Q8IVH2 680 aaPredicted RBP13.54□□□□□ -0.24
NCSTN-214ENST00000491390 MAGEB6Q8N7X4 407 aa13.54□□□□□ -0.24
NCSTN-214ENST00000491390 EAF2Q96CJ1 260 aaPredicted RBP13.54□□□□□ -0.24
NCSTN-214ENST00000491390 SNX27Q96L92 541 aa13.54□□□□□ -0.24
NCSTN-214ENST00000491390 GAS2L1Q99501 681 aaPredicted RBP13.54□□□□□ -0.24
NCSTN-214ENST00000491390 GPR108Q9NPR9 543 aa13.54□□□□□ -0.24
NCSTN-214ENST00000491390 CXXC1Q9P0U4 656 aaPredicted RBP13.54□□□□□ -0.24
NCSTN-214ENST00000491390 ZNF236Q9UL36 1845 aa13.54□□□□□ -0.24
NCSTN-214ENST00000491390 C19orf81C9J6K1 198 aa13.53□□□□□ -0.24
NCSTN-214ENST00000491390 KBTBD13C9JR72 458 aa13.53□□□□□ -0.24
NCSTN-214ENST00000491390 HLA-DOAP06340 250 aa13.53□□□□□ -0.24
NCSTN-214ENST00000491390 PTPREP23469 700 aa13.53□□□□□ -0.24
NCSTN-214ENST00000491390 USP5P45974 858 aa13.53□□□□□ -0.24
NCSTN-214ENST00000491390 METTL16Q86W50 562 aaKnown RBP13.53□□□□□ -0.24
NCSTN-214ENST00000491390 ITPRIPQ8IWB1 547 aa13.53□□□□□ -0.24
NCSTN-214ENST00000491390 CCAR1Q8IX12 1150 aaKnown RBP13.53□□□□□ -0.24
NCSTN-214ENST00000491390 NPLOC4Q8TAT6 608 aa13.53□□□□□ -0.24
NCSTN-214ENST00000491390 ACER1Q8TDN7 264 aa13.53□□□□□ -0.24
NCSTN-214ENST00000491390 PPM1EQ8WY54 764 aa13.53□□□□□ -0.24
NCSTN-214ENST00000491390 FEZ1Q99689 392 aa13.53□□□□□ -0.24
NCSTN-214ENST00000491390 BCL11AQ9H165 835 aa13.53□□□□□ -0.24
NCSTN-214ENST00000491390 PRDM12Q9H4Q4 367 aa13.53□□□□□ -0.24
NCSTN-214ENST00000491390 RABGAP1Q9Y3P9 1069 aa13.53□□□□□ -0.24
NCSTN-214ENST00000491390 TACC3Q9Y6A5 838 aa13.53□□□□□ -0.24
NCSTN-214ENST00000491390 WDFY4Q6ZS81 3184 aa13.53□□□□□ -0.24
NCSTN-214ENST00000491390 CCER2I3L3R5 266 aa13.52□□□□□ -0.25
NCSTN-214ENST00000491390 CLTBP09497 229 aa13.52□□□□□ -0.25
NCSTN-214ENST00000491390 CNGA1P29973 690 aa13.52□□□□□ -0.25
NCSTN-214ENST00000491390 ADCYAP1R1P41586 468 aa13.52□□□□□ -0.25
NCSTN-214ENST00000491390 FPGSQ05932 587 aa13.52□□□□□ -0.25
NCSTN-214ENST00000491390 RAB3GAP1Q15042 981 aa13.52□□□□□ -0.25
NCSTN-214ENST00000491390 WDR78Q5VTH9 848 aa13.52□□□□□ -0.25
NCSTN-214ENST00000491390 USP17L2Q6R6M4 530 aa13.52□□□□□ -0.25
NCSTN-214ENST00000491390 PBX4Q9BYU1 374 aa13.52□□□□□ -0.25
NCSTN-214ENST00000491390 CWC22Q9HCG8 908 aaKnown RBP13.52□□□□□ -0.25
NCSTN-214ENST00000491390 C11orf16Q9NQ32 467 aa13.52□□□□□ -0.25
NCSTN-214ENST00000491390 SEPT4O43236 478 aa13.51□□□□□ -0.25
NCSTN-214ENST00000491390 GLRX3O76003 335 aaKnown RBP13.51□□□□□ -0.25
NCSTN-214ENST00000491390 PBX2P40425 430 aa13.51□□□□□ -0.25
NCSTN-214ENST00000491390 PLCD1P51178 756 aa13.51□□□□□ -0.25
NCSTN-214ENST00000491390 ATP2B2Q01814 1243 aa13.51□□□□□ -0.25
NCSTN-214ENST00000491390 LRRC41Q15345 812 aa13.51□□□□□ -0.25
NCSTN-214ENST00000491390 OLFML2BQ68BL8 750 aa13.51□□□□□ -0.25
NCSTN-214ENST00000491390 EPHX3Q9H6B9 360 aa13.51□□□□□ -0.25
NCSTN-214ENST00000491390 PHF24Q9UPV7 400 aa13.51□□□□□ -0.25
NCSTN-214ENST00000491390 EXOC6BQ9Y2D4 811 aa13.51□□□□□ -0.25
NCSTN-214ENST00000491390 LBX2Q6XYB7 198 aa13.5□□□□□ -0.25
NCSTN-214ENST00000491390 FTSJ3Q8IY81 847 aaKnown RBP13.5□□□□□ -0.25
NCSTN-214ENST00000491390 ZNF512BQ96KM6 892 aaPredicted RBP13.5□□□□□ -0.25
NCSTN-214ENST00000491390 C12orf42Q96LP6 360 aa13.5□□□□□ -0.25
NCSTN-214ENST00000491390 BTBD7Q9P203 1132 aa13.5□□□□□ -0.25
NCSTN-214ENST00000491390 NOP58Q9Y2X3 529 aaKnown RBP13.5□□□□□ -0.25
NCSTN-214ENST00000491390 GPR37L1O60883 481 aa13.49□□□□□ -0.25
NCSTN-214ENST00000491390 RAG1P15918 1043 aa13.49□□□□□ -0.25
NCSTN-214ENST00000491390 VCAM1P19320 739 aa13.49□□□□□ -0.25
NCSTN-214ENST00000491390 GUCY1A2P33402 732 aa13.49□□□□□ -0.25
NCSTN-214ENST00000491390 CCNA1P78396 465 aa13.49□□□□□ -0.25
NCSTN-214ENST00000491390 ABCB5Q2M3G0 1257 aa13.49□□□□□ -0.25
NCSTN-214ENST00000491390 CERKLQ49MI3 558 aaPredicted RBP13.49□□□□□ -0.25
NCSTN-214ENST00000491390 TMEM31Q5JXX7 168 aa13.49□□□□□ -0.25
NCSTN-214ENST00000491390 TATDN1Q6P1N9 297 aa13.49□□□□□ -0.25
NCSTN-214ENST00000491390 C16orf59Q7L2K0 433 aa13.49□□□□□ -0.25
NCSTN-214ENST00000491390 AACSQ86V21 672 aa13.49□□□□□ -0.25
NCSTN-214ENST00000491390 IL27Q8NEV9 243 aa13.49□□□□□ -0.25
NCSTN-214ENST00000491390 FERMT2Q96AC1 680 aa13.49□□□□□ -0.25
NCSTN-214ENST00000491390 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.49□□□□□ -0.255e-9■□□□□ 9.6
NCSTN-214ENST00000491390 IL1RAPL2Q9NP60 686 aa13.49□□□□□ -0.25
NCSTN-214ENST00000491390 GINM1Q9NU53 330 aa13.49□□□□□ -0.25
NCSTN-214ENST00000491390 SERPINB13Q9UIV8 391 aa13.49□□□□□ -0.25
NCSTN-214ENST00000491390 GRXCR1A8MXD5 290 aa13.48□□□□□ -0.25
NCSTN-214ENST00000491390 USP17L15C9J2P7 530 aa13.48□□□□□ -0.25
NCSTN-214ENST00000491390 USP17L13C9JLJ4 530 aa13.48□□□□□ -0.25
NCSTN-214ENST00000491390 USP17L11C9JVI0 530 aa13.48□□□□□ -0.25
NCSTN-214ENST00000491390 USP17L18D6R9N7 530 aa13.48□□□□□ -0.25
NCSTN-214ENST00000491390 USP17L22D6RA61 530 aa13.48□□□□□ -0.25
NCSTN-214ENST00000491390 USP17L17D6RBQ6 530 aa13.48□□□□□ -0.25
NCSTN-214ENST00000491390 USP17L19D6RCP7 530 aa13.48□□□□□ -0.25
NCSTN-214ENST00000491390 USP17L20D6RJB6 530 aa13.48□□□□□ -0.25
NCSTN-214ENST00000491390 APBB1O00213 710 aa13.48□□□□□ -0.25
NCSTN-214ENST00000491390 CYP2D6P10635 497 aa13.48□□□□□ -0.25
NCSTN-214ENST00000491390 SHMT1P34896 483 aa13.48□□□□□ -0.25
NCSTN-214ENST00000491390 USP17L24Q0WX57 530 aa13.48□□□□□ -0.25
NCSTN-214ENST00000491390 SEPT2Q15019 361 aa13.48□□□□□ -0.25
NCSTN-214ENST00000491390 CCDC85BQ15834 202 aaPredicted RBP13.48□□□□□ -0.25
NCSTN-214ENST00000491390 SLFNL1Q499Z3 407 aa13.48□□□□□ -0.25
NCSTN-214ENST00000491390 FAM47AQ5JRC9 791 aa13.48□□□□□ -0.25
NCSTN-214ENST00000491390 ANO1Q5XXA6 986 aa13.48□□□□□ -0.25
NCSTN-214ENST00000491390 CEP85Q6P2H3 762 aa13.48□□□□□ -0.25
NCSTN-214ENST00000491390 CATSPERGQ6ZRH7 1159 aa13.48□□□□□ -0.25
NCSTN-214ENST00000491390 ANKRD33Q7Z3H0 272 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms