RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 PDE4BQ07343 736 aa19.77■□□□□ 0.76
PDLIM2-217ENST00000491330 Q3C1V9 767 aa19.77■□□□□ 0.76
PDLIM2-217ENST00000491330 SLFNL1Q499Z3 407 aa19.77■□□□□ 0.76
PDLIM2-217ENST00000491330 TSHZ3Q63HK5 1081 aa19.77■□□□□ 0.76
PDLIM2-217ENST00000491330 ANKLE1Q8NAG6 615 aa19.77■□□□□ 0.76
PDLIM2-217ENST00000491330 APBA2Q99767 749 aa19.77■□□□□ 0.76
PDLIM2-217ENST00000491330 CTDP1Q9Y5B0 961 aaPredicted RBP19.77■□□□□ 0.76
PDLIM2-217ENST00000491330 LOC285556D6RIA3 1793 aa19.77■□□□□ 0.76
PDLIM2-217ENST00000491330 ATAD5Q96QE3 1844 aa19.76■□□□□ 0.75
PDLIM2-217ENST00000491330 MAP2K5Q13163 448 aa19.76■□□□□ 0.75
PDLIM2-217ENST00000491330 PLS1Q14651 629 aa19.76■□□□□ 0.75
PDLIM2-217ENST00000491330 OSBP2Q969R2 916 aa19.76■□□□□ 0.75
PDLIM2-217ENST00000491330 EVI5LQ96CN4 794 aa19.76■□□□□ 0.75
PDLIM2-217ENST00000491330 NAPBQ9H115 298 aa19.76■□□□□ 0.75
PDLIM2-217ENST00000491330 PAK6Q9NQU5 681 aaPredicted RBP19.76■□□□□ 0.75
PDLIM2-217ENST00000491330 PTPRFP10586 1907 aa19.75■□□□□ 0.75
PDLIM2-217ENST00000491330 SPDYE16A6NNV3 312 aaPredicted RBP19.75■□□□□ 0.75
PDLIM2-217ENST00000491330 GSG1L2A8MUP6 293 aa19.75■□□□□ 0.75
PDLIM2-217ENST00000491330 SAMD1Q6SPF0 538 aaPredicted RBP19.75■□□□□ 0.75
PDLIM2-217ENST00000491330 NECAB2Q7Z6G3 386 aa19.75■□□□□ 0.75
PDLIM2-217ENST00000491330 DPP9Q86TI2 863 aa19.75■□□□□ 0.75
PDLIM2-217ENST00000491330 TICAM2Q86XR7 235 aa19.75■□□□□ 0.75
PDLIM2-217ENST00000491330 MROH8Q9H579 483 aa19.75■□□□□ 0.75
PDLIM2-217ENST00000491330 KIAA0100Q14667 2235 aaKnown RBP19.75■□□□□ 0.75
PDLIM2-217ENST00000491330 PDE4DIPQ5VU43 2346 aa19.74■□□□□ 0.75
PDLIM2-217ENST00000491330 CYP2D7A0A087X1C5 515 aa19.74■□□□□ 0.75
PDLIM2-217ENST00000491330 A0A1W2PRG0 241 aa19.74■□□□□ 0.75
PDLIM2-217ENST00000491330 EEF2P13639 858 aaKnown RBP19.74■□□□□ 0.75
PDLIM2-217ENST00000491330 COPB2P35606 906 aa19.74■□□□□ 0.75
PDLIM2-217ENST00000491330 IFNL3Q8IZI9 196 aa19.74■□□□□ 0.75
PDLIM2-217ENST00000491330 SPICE1Q8N0Z3 855 aa19.74■□□□□ 0.75
PDLIM2-217ENST00000491330 SHCBP1Q8NEM2 672 aa19.74■□□□□ 0.75
PDLIM2-217ENST00000491330 PORCNQ9H237 461 aa19.74■□□□□ 0.75
PDLIM2-217ENST00000491330 SLC25A27O95847 323 aa19.73■□□□□ 0.75
PDLIM2-217ENST00000491330 PRKAR2AP13861 404 aaKnown RBP19.73■□□□□ 0.75
PDLIM2-217ENST00000491330 PTPREP23469 700 aa19.73■□□□□ 0.75
PDLIM2-217ENST00000491330 DSG3P32926 999 aa19.73■□□□□ 0.75
PDLIM2-217ENST00000491330 MORN1Q5T089 497 aa19.73■□□□□ 0.75
PDLIM2-217ENST00000491330 PI4K2BQ8TCG2 481 aa19.73■□□□□ 0.75
PDLIM2-217ENST00000491330 SIPA1L1O43166 1804 aa19.73■□□□□ 0.75
PDLIM2-217ENST00000491330 RBBP6Q7Z6E9 1792 aaKnown RBP19.72■□□□□ 0.75
PDLIM2-217ENST00000491330 EVI5O60447 810 aa19.72■□□□□ 0.75
PDLIM2-217ENST00000491330 MSCO60682 206 aa19.72■□□□□ 0.75
PDLIM2-217ENST00000491330 STK11IPQ8N1F8 1099 aa19.72■□□□□ 0.75
PDLIM2-217ENST00000491330 TRIB2Q92519 343 aa19.72■□□□□ 0.75
PDLIM2-217ENST00000491330 SHISA4Q96DD7 197 aa19.72■□□□□ 0.75
PDLIM2-217ENST00000491330 NBPF3Q9H094 633 aa19.72■□□□□ 0.75
PDLIM2-217ENST00000491330 SPATC1LQ9H0A9 340 aa19.72■□□□□ 0.75
PDLIM2-217ENST00000491330 NAV1Q8NEY1 1877 aa19.71■□□□□ 0.75
PDLIM2-217ENST00000491330 CHGBP05060 677 aa19.71■□□□□ 0.75
PDLIM2-217ENST00000491330 TSPY3P0CV98 308 aa19.71■□□□□ 0.75
PDLIM2-217ENST00000491330 TSPY8P0CW00 308 aa19.71■□□□□ 0.75
PDLIM2-217ENST00000491330 ZMYM1Q5SVZ6 1142 aa19.71■□□□□ 0.75
PDLIM2-217ENST00000491330 NCAPG2Q86XI2 1143 aa19.71■□□□□ 0.75
PDLIM2-217ENST00000491330 CRISPLD2Q9H0B8 497 aa19.71■□□□□ 0.75
PDLIM2-217ENST00000491330 BTBD7Q9P203 1132 aa19.71■□□□□ 0.75
PDLIM2-217ENST00000491330 NYAP2Q9P242 653 aa19.71■□□□□ 0.75
PDLIM2-217ENST00000491330 SYNPO2Q9UMS6 1093 aa19.71■□□□□ 0.75
PDLIM2-217ENST00000491330 ZSWIM8A7E2V4 1837 aa19.7■□□□□ 0.74
PDLIM2-217ENST00000491330 TRIM6-TRIM34B2RNG4 842 aa19.7■□□□□ 0.74
PDLIM2-217ENST00000491330 PEX10O60683 326 aa19.7■□□□□ 0.74
PDLIM2-217ENST00000491330 FCER1AP12319 257 aa19.7■□□□□ 0.74
PDLIM2-217ENST00000491330 MFAP1P55081 439 aaKnown RBP19.7■□□□□ 0.74
PDLIM2-217ENST00000491330 EVX2Q03828 476 aa19.7■□□□□ 0.74
PDLIM2-217ENST00000491330 ABRAQ8N0Z2 381 aa19.7■□□□□ 0.74
PDLIM2-217ENST00000491330 HELLSQ9NRZ9 838 aa19.7■□□□□ 0.74
PDLIM2-217ENST00000491330 STAP2Q9UGK3 403 aa19.7■□□□□ 0.74
PDLIM2-217ENST00000491330 M0R2C6 588 aa19.69■□□□□ 0.74
PDLIM2-217ENST00000491330 CNMDO75829 334 aa19.69■□□□□ 0.74
PDLIM2-217ENST00000491330 CNGA1P29973 690 aa19.69■□□□□ 0.74
PDLIM2-217ENST00000491330 PDE1AP54750 535 aa19.69■□□□□ 0.74
PDLIM2-217ENST00000491330 USP6NLQ92738 828 aa19.69■□□□□ 0.74
PDLIM2-217ENST00000491330 MOV10L1Q9BXT6 1211 aaKnown RBP19.69■□□□□ 0.74
PDLIM2-217ENST00000491330 CLIP2Q9UDT6 1046 aa19.69■□□□□ 0.74
PDLIM2-217ENST00000491330 ISY1Q9ULR0 285 aaKnown RBP19.69■□□□□ 0.74
PDLIM2-217ENST00000491330 MGAMO43451 1857 aa19.69■□□□□ 0.74
PDLIM2-217ENST00000491330 ZBED4O75132 1171 aa19.68■□□□□ 0.74
PDLIM2-217ENST00000491330 TTLL1O95922 423 aa19.68■□□□□ 0.74
PDLIM2-217ENST00000491330 HOXC6P09630 235 aa19.68■□□□□ 0.74
PDLIM2-217ENST00000491330 ERCC3P19447 782 aa19.68■□□□□ 0.74
PDLIM2-217ENST00000491330 RASA1P20936 1047 aa19.68■□□□□ 0.74
PDLIM2-217ENST00000491330 CACNB2Q08289 660 aaPredicted RBP19.68■□□□□ 0.74
PDLIM2-217ENST00000491330 GRB14Q14449 540 aa19.68■□□□□ 0.74
PDLIM2-217ENST00000491330 KCTD2Q14681 263 aa19.68■□□□□ 0.74
PDLIM2-217ENST00000491330 MAP3K21Q5TCX8 1036 aa19.68■□□□□ 0.74
PDLIM2-217ENST00000491330 ATG4CQ96DT6 458 aa19.68■□□□□ 0.74
PDLIM2-217ENST00000491330 PAWRQ96IZ0 340 aaKnown RBP19.68■□□□□ 0.74
PDLIM2-217ENST00000491330 ROBO3Q96MS0 1386 aa19.68■□□□□ 0.74
PDLIM2-217ENST00000491330 F5H6K3 240 aa19.67■□□□□ 0.74
PDLIM2-217ENST00000491330 H0YGN5 161 aa19.67■□□□□ 0.74
PDLIM2-217ENST00000491330 KLRC3Q07444 240 aa19.67■□□□□ 0.74
PDLIM2-217ENST00000491330 PPARAQ07869 468 aa19.67■□□□□ 0.74
PDLIM2-217ENST00000491330 CLEC10AQ8IUN9 316 aa19.67■□□□□ 0.74
PDLIM2-217ENST00000491330 SIAH1Q8IUQ4 282 aa19.67■□□□□ 0.74
PDLIM2-217ENST00000491330 PRPF38AQ8NAV1 312 aaKnown RBP19.67■□□□□ 0.74
PDLIM2-217ENST00000491330 OTUD7AQ8TE49 926 aaPredicted RBP19.67■□□□□ 0.74
PDLIM2-217ENST00000491330 SLF1Q9BQI6 1058 aa19.67■□□□□ 0.74
PDLIM2-217ENST00000491330 C11orf49Q9H6J7 331 aa19.67■□□□□ 0.74
PDLIM2-217ENST00000491330 SUPT16HQ9Y5B9 1047 aaKnown RBP19.67■□□□□ 0.74
PDLIM2-217ENST00000491330 DDX60LQ5H9U9 1706 aaKnown RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms