RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 TMEM87BQ96K49 555 aa11.02□□□□□ -0.65
ERCC3-208ENST00000491292 CCDC113Q9H0I3 377 aa11.02□□□□□ -0.65
ERCC3-208ENST00000491292 ABHD10Q9NUJ1 306 aa11.02□□□□□ -0.65
ERCC3-208ENST00000491292 ANKRD18BA2A2Z9 1011 aa11.01□□□□□ -0.65
ERCC3-208ENST00000491292 DEXIO95424 95 aa11.01□□□□□ -0.65
ERCC3-208ENST00000491292 TUBBP07437 444 aa11.01□□□□□ -0.65
ERCC3-208ENST00000491292 NF2P35240 595 aa11.01□□□□□ -0.65
ERCC3-208ENST00000491292 SLC20A2Q08357 652 aa11.01□□□□□ -0.65
ERCC3-208ENST00000491292 PTPAQ15257 358 aa11.01□□□□□ -0.65
ERCC3-208ENST00000491292 MCTP2Q6DN12 878 aa11.01□□□□□ -0.65
ERCC3-208ENST00000491292 ATG9AQ7Z3C6 839 aa11.01□□□□□ -0.65
ERCC3-208ENST00000491292 PAGE5Q96GU1 130 aa11.01□□□□□ -0.65
ERCC3-208ENST00000491292 AXIN2Q9Y2T1 843 aa11.01□□□□□ -0.65
ERCC3-208ENST00000491292 USP31Q70CQ4 1352 aa11.01□□□□□ -0.65
ERCC3-208ENST00000491292 B4DLN1 442 aa11.01□□□□□ -0.65
ERCC3-208ENST00000491292 GYPCP04921 128 aa11.01□□□□□ -0.65
ERCC3-208ENST00000491292 CD44P16070 742 aaKnown RBP11.01□□□□□ -0.65
ERCC3-208ENST00000491292 PTPREP23469 700 aa11.01□□□□□ -0.65
ERCC3-208ENST00000491292 ERCC5P28715 1186 aaPredicted RBP11.01□□□□□ -0.65
ERCC3-208ENST00000491292 CORO7P57737 925 aa11.01□□□□□ -0.65
ERCC3-208ENST00000491292 PTGDRQ13258 359 aa11.01□□□□□ -0.65
ERCC3-208ENST00000491292 PDIA6Q15084 440 aa11.01□□□□□ -0.65
ERCC3-208ENST00000491292 C8orf74Q6P047 294 aa11.01□□□□□ -0.65
ERCC3-208ENST00000491292 TMEM139Q8IV31 216 aa11.01□□□□□ -0.65
ERCC3-208ENST00000491292 SECISBP2LQ93073 1101 aaKnown RBP11.01□□□□□ -0.65
ERCC3-208ENST00000491292 NEDD4P46934 1319 aa11.01□□□□□ -0.65
ERCC3-208ENST00000491292 TMEM2Q9UHN6 1383 aa11.01□□□□□ -0.65
ERCC3-208ENST00000491292 ESYT3A0FGR9 886 aa11.01□□□□□ -0.65
ERCC3-208ENST00000491292 SMIM23A6NLE4 172 aa11.01□□□□□ -0.65
ERCC3-208ENST00000491292 E7EVH7 732 aa11.01□□□□□ -0.65
ERCC3-208ENST00000491292 MMP1P03956 469 aa11.01□□□□□ -0.65
ERCC3-208ENST00000491292 IFT88Q13099 833 aa11.01□□□□□ -0.65
ERCC3-208ENST00000491292 TUBB2AQ13885 445 aa11.01□□□□□ -0.65
ERCC3-208ENST00000491292 TTC38Q5R3I4 469 aa11.01□□□□□ -0.65
ERCC3-208ENST00000491292 KLHL7Q8IXQ5 586 aa11.01□□□□□ -0.65
ERCC3-208ENST00000491292 BANK1Q8NDB2 785 aa11.01□□□□□ -0.65
ERCC3-208ENST00000491292 EHBP1Q8NDI1 1231 aa11.01□□□□□ -0.65
ERCC3-208ENST00000491292 SIRT1Q96EB6 747 aa11.01□□□□□ -0.65
ERCC3-208ENST00000491292 ALS2CR12Q96Q35 445 aa11.01□□□□□ -0.65
ERCC3-208ENST00000491292 UIMC1Q96RL1 719 aa11.01□□□□□ -0.65
ERCC3-208ENST00000491292 TUBB2BQ9BVA1 445 aa11.01□□□□□ -0.65
ERCC3-208ENST00000491292 PSD3Q9NYI0 1048 aa11.01□□□□□ -0.65
ERCC3-208ENST00000491292 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.01□□□□□ -0.65
ERCC3-208ENST00000491292 PSMA7O14818 248 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 BACH1O14867 736 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 HGSO14964 777 aaPredicted RBP11□□□□□ -0.65
ERCC3-208ENST00000491292 PHKA1P46020 1223 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 NOP2P46087 812 aaKnown RBP11□□□□□ -0.65
ERCC3-208ENST00000491292 VAV2P52735 878 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 ASIC1P78348 528 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 E2F5Q15329 346 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 KCTD19Q17RG1 926 aaPredicted RBP11□□□□□ -0.65
ERCC3-208ENST00000491292 IFIT1BQ5T764 474 aaKnown RBP11□□□□□ -0.65
ERCC3-208ENST00000491292 KRT28Q7Z3Y7 464 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 CSGALNACT2Q8N6G5 542 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 TTC26A0AVF1 554 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 MAP2K7O14733 419 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 PDE6AP16499 860 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 GUCY2CP25092 1073 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 PDE6BP35913 854 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 EPS15P42566 896 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 ERVK-24P63145 666 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 TUBB4BP68371 445 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 ACTN3Q08043 901 aaPredicted RBP11□□□□□ -0.65
ERCC3-208ENST00000491292 KRT26Q7Z3Y9 468 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 C2CD5Q86YS7 1000 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 KRT23Q9C075 422 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 HAUS4Q9H6D7 363 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 KCND1Q9NSA2 647 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 A0A1B0GTH6 734 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 CYP7A1P22680 504 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 ITGA6P23229 1130 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 ATP6V1AP38606 617 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 USP14P54578 494 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 MICALCLQ6ZW33 695 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 ZNF654Q8IZM8 581 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 SDR42E1Q8WUS8 393 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 NOC4LQ9BVI4 516 aaKnown RBP11□□□□□ -0.65
ERCC3-208ENST00000491292 DNAJC5Q9H3Z4 198 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 SEC31BQ9NQW1 1179 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 EHD2Q9NZN4 543 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 HPSEQ9Y251 543 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 CCDC194A0A1B0GVG4 234 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 TMCO5BA8MYB1 307 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 EVA1CP58658 441 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 CUL4BQ13620 913 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 IQCA1Q86XH1 822 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 IFNL3Q8IZI9 196 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 CDK5RAP3Q96JB5 506 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 VAT1LQ9HCJ6 419 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 GOPCQ9HD26 462 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 DUSP10Q9Y6W6 482 aa11□□□□□ -0.65
ERCC3-208ENST00000491292 DLC1Q96QB1 1528 aa10.99□□□□□ -0.65
ERCC3-208ENST00000491292 FRMPD1Q5SYB0 1578 aa10.99□□□□□ -0.65
ERCC3-208ENST00000491292 MYO1FO00160 1098 aa10.99□□□□□ -0.65
ERCC3-208ENST00000491292 CCDC121Q6ZUS5 278 aa10.99□□□□□ -0.65
ERCC3-208ENST00000491292 ANKLE2Q86XL3 938 aa10.99□□□□□ -0.65
ERCC3-208ENST00000491292 TRIML1Q8N9V2 468 aa10.99□□□□□ -0.65
ERCC3-208ENST00000491292 FANCBQ8NB91 859 aa10.99□□□□□ -0.65
ERCC3-208ENST00000491292 TAF4BQ92750 862 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms