RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 GPR160Q9UJ42 338 aa7.7□□□□□ -1.18
PHC3-213ENST00000491258 CTSWP56202 376 aa7.69□□□□□ -1.18
PHC3-213ENST00000491258 EAPPQ56P03 285 aaPredicted RBP7.69□□□□□ -1.18
PHC3-213ENST00000491258 TMEM132EQ6IEE7 984 aa7.69□□□□□ -1.18
PHC3-213ENST00000491258 INTS4Q96HW7 963 aaKnown RBP7.69□□□□□ -1.18
PHC3-213ENST00000491258 F6X3S4 739 aa7.68□□□□□ -1.18
PHC3-213ENST00000491258 PDE6BP35913 854 aa7.68□□□□□ -1.18
PHC3-213ENST00000491258 DLG4P78352 724 aa7.68□□□□□ -1.18
PHC3-213ENST00000491258 BNC2Q6ZN30 1099 aaPredicted RBP7.68□□□□□ -1.18
PHC3-213ENST00000491258 PHC3Q8NDX5 983 aa7.68□□□□□ -1.18
PHC3-213ENST00000491258 KLHL3Q9UH77 587 aa7.68□□□□□ -1.18
PHC3-213ENST00000491258 YBX2Q9Y2T7 364 aaKnown RBP7.68□□□□□ -1.18
PHC3-213ENST00000491258 MYOCOSA0A1B0GUC4 107 aa7.67□□□□□ -1.18
PHC3-213ENST00000491258 BUD31P41223 144 aaPredicted RBP7.67□□□□□ -1.18
PHC3-213ENST00000491258 DUSP4Q13115 394 aa7.67□□□□□ -1.18
PHC3-213ENST00000491258 PSMD2Q13200 908 aa7.67□□□□□ -1.18
PHC3-213ENST00000491258 NR0B2Q15466 257 aa7.67□□□□□ -1.18
PHC3-213ENST00000491258 TAF1CQ15572 869 aaPredicted RBP7.67□□□□□ -1.18
PHC3-213ENST00000491258 CLEC16AQ2KHT3 1053 aa7.67□□□□□ -1.18
PHC3-213ENST00000491258 SPPL2CQ8IUH8 684 aa7.67□□□□□ -1.18
PHC3-213ENST00000491258 NOC4LQ9BVI4 516 aaKnown RBP7.67□□□□□ -1.18
PHC3-213ENST00000491258 SEMA7AO75326 666 aa7.66□□□□□ -1.18
PHC3-213ENST00000491258 HOXA5P20719 270 aa7.66□□□□□ -1.18
PHC3-213ENST00000491258 GALK1P51570 392 aa7.66□□□□□ -1.18
PHC3-213ENST00000491258 CHRNEQ04844 493 aa7.66□□□□□ -1.18
PHC3-213ENST00000491258 TMEM201Q5SNT2 666 aa7.66□□□□□ -1.18
PHC3-213ENST00000491258 CCDC84Q86UT8 332 aaPredicted RBP7.66□□□□□ -1.18
PHC3-213ENST00000491258 BAHD1Q8TBE0 780 aaPredicted RBP7.66□□□□□ -1.18
PHC3-213ENST00000491258 KREMEN1Q96MU8 473 aa7.66□□□□□ -1.18
PHC3-213ENST00000491258 PARP2Q9UGN5 583 aa7.66□□□□□ -1.18
PHC3-213ENST00000491258 SHISA3A0PJX4 238 aa7.65□□□□□ -1.18
PHC3-213ENST00000491258 ANKRD33BA6NCL7 494 aa7.65□□□□□ -1.18
PHC3-213ENST00000491258 PEX10O60683 326 aa7.65□□□□□ -1.18
PHC3-213ENST00000491258 CILPO75339 1184 aa7.65□□□□□ -1.18
PHC3-213ENST00000491258 ST13P50502 369 aaKnown RBP7.65□□□□□ -1.18
PHC3-213ENST00000491258 CHMP4BP1P59074 171 aa7.65□□□□□ -1.18
PHC3-213ENST00000491258 TEKQ02763 1124 aa7.65□□□□□ -1.18
PHC3-213ENST00000491258 SLFN12Q8IYM2 578 aa7.65□□□□□ -1.18
PHC3-213ENST00000491258 ANKS4BQ8N8V4 417 aa7.65□□□□□ -1.18
PHC3-213ENST00000491258 ASPNQ9BXN1 380 aa7.65□□□□□ -1.18
PHC3-213ENST00000491258 REV1Q9UBZ9 1251 aa7.65□□□□□ -1.18
PHC3-213ENST00000491258 CNOT6Q9ULM6 557 aaKnown RBP7.65□□□□□ -1.18
PHC3-213ENST00000491258 RBM47A0AV96 593 aaKnown RBP7.64□□□□□ -1.19
PHC3-213ENST00000491258 CHURC1-FNTBB4DL54 471 aa7.64□□□□□ -1.19
PHC3-213ENST00000491258 PSPNO60542 156 aa7.64□□□□□ -1.19
PHC3-213ENST00000491258 F13A1P00488 732 aa7.64□□□□□ -1.19
PHC3-213ENST00000491258 CAMK2GQ13555 558 aaPredicted RBP7.64□□□□□ -1.19
PHC3-213ENST00000491258 PHACTR4Q8IZ21 702 aa7.64□□□□□ -1.19
PHC3-213ENST00000491258 CCDC74BQ96LY2 380 aa7.64□□□□□ -1.19
PHC3-213ENST00000491258 SGPP1Q9BX95 441 aa7.64□□□□□ -1.19
PHC3-213ENST00000491258 ZNF552Q9H707 407 aaPredicted RBP7.64□□□□□ -1.19
PHC3-213ENST00000491258 EBF1Q9UH73 591 aa7.64□□□□□ -1.19
PHC3-213ENST00000491258 TEX51A0A1B0GUA7 166 aa7.63□□□□□ -1.19
PHC3-213ENST00000491258 FAM221AA4D161 298 aa7.63□□□□□ -1.19
PHC3-213ENST00000491258 GRIN3BO60391 1043 aa7.63□□□□□ -1.19
PHC3-213ENST00000491258 PF4P02776 101 aa7.63□□□□□ -1.19
PHC3-213ENST00000491258 BMP7P18075 431 aa7.63□□□□□ -1.19
PHC3-213ENST00000491258 LMNB2Q03252 620 aa7.63□□□□□ -1.19
PHC3-213ENST00000491258 SNX17Q15036 470 aa7.63□□□□□ -1.19
PHC3-213ENST00000491258 SIRT2Q8IXJ6 389 aa7.63□□□□□ -1.19
PHC3-213ENST00000491258 GATAD2BQ8WXI9 593 aa7.63□□□□□ -1.19
PHC3-213ENST00000491258 ZCCHC4Q9H5U6 513 aa7.63□□□□□ -1.19
PHC3-213ENST00000491258 PARD6AQ9NPB6 346 aa7.63□□□□□ -1.19
PHC3-213ENST00000491258 DAB2P98082 770 aa7.62□□□□□ -1.19
PHC3-213ENST00000491258 XPCQ01831 940 aaPredicted RBP7.62□□□□□ -1.19
PHC3-213ENST00000491258 C20orf173Q96LM9 149 aa7.62□□□□□ -1.19
PHC3-213ENST00000491258 KIF2CQ99661 725 aa7.62□□□□□ -1.19
PHC3-213ENST00000491258 ASCC2Q9H1I8 757 aaPredicted RBP7.62□□□□□ -1.19
PHC3-213ENST00000491258 KCTD3Q9Y597 815 aa7.62□□□□□ -1.19
PHC3-213ENST00000491258 RFXAPO00287 272 aa7.61□□□□□ -1.19
PHC3-213ENST00000491258 HTR3BO95264 441 aa7.61□□□□□ -1.19
PHC3-213ENST00000491258 RPL10P27635 214 aaKnown RBP7.61□□□□□ -1.19
PHC3-213ENST00000491258 ZNF385BQ569K4 471 aa7.61□□□□□ -1.19
PHC3-213ENST00000491258 FAM161BQ96MY7 647 aa7.61□□□□□ -1.19
PHC3-213ENST00000491258 GCM1Q9NP62 436 aa7.61□□□□□ -1.19
PHC3-213ENST00000491258 ZMYM5Q9UJ78 669 aa7.61□□□□□ -1.19
PHC3-213ENST00000491258 POLR3KQ9Y2Y1 108 aaPredicted RBP7.61□□□□□ -1.19
PHC3-213ENST00000491258 USP31Q70CQ4 1352 aa7.6□□□□□ -1.19
PHC3-213ENST00000491258 OR14I1A6ND48 311 aa7.6□□□□□ -1.19
PHC3-213ENST00000491258 PATL2C9JE40 543 aaKnown RBP7.6□□□□□ -1.19
PHC3-213ENST00000491258 USP2O75604 605 aaPredicted RBP7.6□□□□□ -1.19
PHC3-213ENST00000491258 CTSHP09668 335 aa7.6□□□□□ -1.19
PHC3-213ENST00000491258 GBP1P32455 592 aa7.6□□□□□ -1.19
PHC3-213ENST00000491258 GBP2P32456 591 aaPredicted RBP7.6□□□□□ -1.19
PHC3-213ENST00000491258 FAM160A1Q05DH4 1040 aa7.6□□□□□ -1.19
PHC3-213ENST00000491258 ADGRF1Q5T601 910 aa7.6□□□□□ -1.19
PHC3-213ENST00000491258 TCERG1LQ5VWI1 586 aa7.6□□□□□ -1.19
PHC3-213ENST00000491258 KRTAP5-3Q6L8H2 238 aa7.6□□□□□ -1.19
PHC3-213ENST00000491258 LINC01599Q8WXQ3 324 aa7.6□□□□□ -1.19
PHC3-213ENST00000491258 RELTQ969Z4 430 aa7.6□□□□□ -1.19
PHC3-213ENST00000491258 SHISA4Q96DD7 197 aa7.6□□□□□ -1.19
PHC3-213ENST00000491258 PRR36Q9H6K5 1346 aa7.59□□□□□ -1.19
PHC3-213ENST00000491258 DNAJA2O60884 412 aa7.59□□□□□ -1.19
PHC3-213ENST00000491258 NMIQ13287 307 aaPredicted RBP7.59□□□□□ -1.19
PHC3-213ENST00000491258 SNAP47Q5SQN1 464 aa7.59□□□□□ -1.19
PHC3-213ENST00000491258 WAPLQ7Z5K2 1190 aa7.59□□□□□ -1.19
PHC3-213ENST00000491258 RELL1Q8IUW5 271 aa7.59□□□□□ -1.19
PHC3-213ENST00000491258 G6PC3Q9BUM1 346 aa7.59□□□□□ -1.19
PHC3-213ENST00000491258 SSPNQ14714 243 aa7.58□□□□□ -1.2
PHC3-213ENST00000491258 SLC14A2Q15849 920 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms