RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 COBLO75128 1261 aa18.7■□□□□ 0.58
SCAMP3-208ENST00000490999 ERCC3P19447 782 aa18.7■□□□□ 0.58
SCAMP3-208ENST00000490999 ITGB8P26012 769 aa18.7■□□□□ 0.58
SCAMP3-208ENST00000490999 SEPT2Q15019 361 aa18.7■□□□□ 0.58
SCAMP3-208ENST00000490999 SNX17Q15036 470 aa18.7■□□□□ 0.58
SCAMP3-208ENST00000490999 ARRDC4Q8NCT1 418 aa18.7■□□□□ 0.58
SCAMP3-208ENST00000490999 ARHGAP45Q92619 1136 aa18.7■□□□□ 0.58
SCAMP3-208ENST00000490999 FRAT1Q92837 279 aaPredicted RBP18.7■□□□□ 0.58
SCAMP3-208ENST00000490999 C1orf115Q9H7X2 142 aa18.7■□□□□ 0.58
SCAMP3-208ENST00000490999 PRDM6Q9NQX0 595 aa18.7■□□□□ 0.58
SCAMP3-208ENST00000490999 MYH1P12882 1939 aa18.69■□□□□ 0.58
SCAMP3-208ENST00000490999 SEPT4O43236 478 aa18.69■□□□□ 0.58
SCAMP3-208ENST00000490999 PLCD1P51178 756 aa18.69■□□□□ 0.58
SCAMP3-208ENST00000490999 EPHB4P54760 987 aa18.69■□□□□ 0.58
SCAMP3-208ENST00000490999 SMAD3P84022 425 aaKnown RBP18.69■□□□□ 0.58
SCAMP3-208ENST00000490999 OLFML2BQ68BL8 750 aa18.69■□□□□ 0.58
SCAMP3-208ENST00000490999 RNPC3Q96LT9 517 aaKnown RBP18.69■□□□□ 0.58
SCAMP3-208ENST00000490999 SPATC1LQ9H0A9 340 aa18.69■□□□□ 0.58
SCAMP3-208ENST00000490999 CCDC8Q9H0W5 538 aaPredicted RBP18.69■□□□□ 0.58
SCAMP3-208ENST00000490999 GPR108Q9NPR9 543 aa18.69■□□□□ 0.58
SCAMP3-208ENST00000490999 A0A1W2PRG0 241 aa18.68■□□□□ 0.58
SCAMP3-208ENST00000490999 MPHOSPH10O00566 681 aaKnown RBP18.68■□□□□ 0.58
SCAMP3-208ENST00000490999 POLA2Q14181 598 aa18.68■□□□□ 0.58
SCAMP3-208ENST00000490999 PLS1Q14651 629 aa18.68■□□□□ 0.58
SCAMP3-208ENST00000490999 LRRC41Q15345 812 aa18.68■□□□□ 0.58
SCAMP3-208ENST00000490999 SAMD1Q6SPF0 538 aaPredicted RBP18.68■□□□□ 0.58
SCAMP3-208ENST00000490999 CLEC10AQ8IUN9 316 aa18.68■□□□□ 0.58
SCAMP3-208ENST00000490999 USP38Q8NB14 1042 aa18.68■□□□□ 0.58
SCAMP3-208ENST00000490999 ANTXR1Q9H6X2 564 aa18.68■□□□□ 0.58
SCAMP3-208ENST00000490999 CABP5Q9NP86 173 aa18.68■□□□□ 0.58
SCAMP3-208ENST00000490999 BCAR3O75815 825 aa18.67■□□□□ 0.58
SCAMP3-208ENST00000490999 TLE2Q04725 743 aa18.67■□□□□ 0.58
SCAMP3-208ENST00000490999 KIAA1755Q5JYT7 1200 aa18.67■□□□□ 0.58
SCAMP3-208ENST00000490999 LENG1Q96BZ8 264 aaPredicted RBP18.67■□□□□ 0.58
SCAMP3-208ENST00000490999 ZNF512BQ96KM6 892 aaPredicted RBP18.67■□□□□ 0.58
SCAMP3-208ENST00000490999 NAV1Q8NEY1 1877 aa18.67■□□□□ 0.58
SCAMP3-208ENST00000490999 SURF6O75683 361 aaKnown RBP18.66■□□□□ 0.58
SCAMP3-208ENST00000490999 TTC6Q86TZ1 520 aa18.66■□□□□ 0.58
SCAMP3-208ENST00000490999 NCAPG2Q86XI2 1143 aa18.66■□□□□ 0.58
SCAMP3-208ENST00000490999 TMEM57Q8N5G2 664 aa18.66■□□□□ 0.58
SCAMP3-208ENST00000490999 SLC44A5Q8NCS7 719 aa18.66■□□□□ 0.58
SCAMP3-208ENST00000490999 PQBP1O60828 265 aaKnown RBP18.65■□□□□ 0.58
SCAMP3-208ENST00000490999 SPICE1Q8N0Z3 855 aa18.65■□□□□ 0.58
SCAMP3-208ENST00000490999 EAF2Q96CJ1 260 aaPredicted RBP18.65■□□□□ 0.58
SCAMP3-208ENST00000490999 ATG4CQ96DT6 458 aa18.65■□□□□ 0.58
SCAMP3-208ENST00000490999 MAML3Q96JK9 1138 aa18.65■□□□□ 0.58
SCAMP3-208ENST00000490999 PGK1P00558 417 aa18.64■□□□□ 0.57
SCAMP3-208ENST00000490999 POLR3DP05423 398 aaPredicted RBP18.64■□□□□ 0.57
SCAMP3-208ENST00000490999 CLTBP09497 229 aa18.64■□□□□ 0.57
SCAMP3-208ENST00000490999 CYP2D6P10635 497 aa18.64■□□□□ 0.57
SCAMP3-208ENST00000490999 COG2Q14746 738 aa18.64■□□□□ 0.57
SCAMP3-208ENST00000490999 GRIN2CQ14957 1233 aa18.64■□□□□ 0.57
SCAMP3-208ENST00000490999 SSH3Q8TE77 659 aa18.64■□□□□ 0.57
SCAMP3-208ENST00000490999 RIOK1Q9BRS2 568 aaKnown RBP18.64■□□□□ 0.57
SCAMP3-208ENST00000490999 XPNPEP3Q9NQH7 507 aa18.64■□□□□ 0.57
SCAMP3-208ENST00000490999 STRNO43815 780 aa18.63■□□□□ 0.57
SCAMP3-208ENST00000490999 FLOT1O75955 427 aa18.63■□□□□ 0.57
SCAMP3-208ENST00000490999 GABPAQ06546 454 aa18.63■□□□□ 0.57
SCAMP3-208ENST00000490999 SHCBP1Q8NEM2 672 aa18.63■□□□□ 0.57
SCAMP3-208ENST00000490999 PHF24Q9UPV7 400 aa18.63■□□□□ 0.57
SCAMP3-208ENST00000490999 A0A1W2PQ45 241 aaPredicted RBP18.62■□□□□ 0.57
SCAMP3-208ENST00000490999 A0A1W2PQY0 241 aa18.62■□□□□ 0.57
SCAMP3-208ENST00000490999 PGK2P07205 417 aa18.62■□□□□ 0.57
SCAMP3-208ENST00000490999 TAL1P17542 331 aaPredicted RBP18.62■□□□□ 0.57
SCAMP3-208ENST00000490999 DNAJB2P25686 324 aa18.62■□□□□ 0.57
SCAMP3-208ENST00000490999 MAP3K12Q12852 859 aa18.62■□□□□ 0.57
SCAMP3-208ENST00000490999 CERS3Q8IU89 383 aa18.62■□□□□ 0.57
SCAMP3-208ENST00000490999 MCM9Q9NXL9 1143 aa18.62■□□□□ 0.57
SCAMP3-208ENST00000490999 HOXC10Q9NYD6 342 aa18.62■□□□□ 0.57
SCAMP3-208ENST00000490999 RAPGEFL1Q9UHV5 662 aa18.62■□□□□ 0.57
SCAMP3-208ENST00000490999 MAGEB6P1A0A0J9YX57 407 aa18.61■□□□□ 0.57
SCAMP3-208ENST00000490999 IPO8O15397 1037 aaKnown RBP18.61■□□□□ 0.57
SCAMP3-208ENST00000490999 RARBP10826 455 aa18.61■□□□□ 0.57
SCAMP3-208ENST00000490999 RAG1P15918 1043 aa18.61■□□□□ 0.57
SCAMP3-208ENST00000490999 FPGSQ05932 587 aa18.61■□□□□ 0.57
SCAMP3-208ENST00000490999 C1orf53Q5VUE5 145 aa18.61■□□□□ 0.57
SCAMP3-208ENST00000490999 SDR42E1Q8WUS8 393 aa18.61■□□□□ 0.57
SCAMP3-208ENST00000490999 MROH8Q9H579 483 aa18.61■□□□□ 0.57
SCAMP3-208ENST00000490999 SLC5A4Q9NY91 659 aa18.61■□□□□ 0.57
SCAMP3-208ENST00000490999 CHD9Q3L8U1 2897 aa18.6■□□□□ 0.57
SCAMP3-208ENST00000490999 IGSF3O75054 1194 aa18.6■□□□□ 0.57
SCAMP3-208ENST00000490999 DSG3P32926 999 aa18.6■□□□□ 0.57
SCAMP3-208ENST00000490999 ATP8B2P98198 1209 aa18.6■□□□□ 0.57
SCAMP3-208ENST00000490999 TMEM132BQ14DG7 1078 aa18.6■□□□□ 0.57
SCAMP3-208ENST00000490999 DYNLL2Q96FJ2 89 aa18.6■□□□□ 0.57
SCAMP3-208ENST00000490999 TACC3Q9Y6A5 838 aa18.6■□□□□ 0.57
SCAMP3-208ENST00000490999 TMEM265A0A087WTH1 108 aa18.59■□□□□ 0.57
SCAMP3-208ENST00000490999 KIAA0355O15063 1070 aa18.59■□□□□ 0.57
SCAMP3-208ENST00000490999 FCER1AP12319 257 aa18.59■□□□□ 0.57
SCAMP3-208ENST00000490999 AKR1B1P15121 316 aa18.59■□□□□ 0.57
SCAMP3-208ENST00000490999 ICA1Q05084 483 aa18.59■□□□□ 0.57
SCAMP3-208ENST00000490999 TJAP1Q5JTD0 557 aa18.59■□□□□ 0.57
SCAMP3-208ENST00000490999 ABRAQ8N0Z2 381 aa18.59■□□□□ 0.57
SCAMP3-208ENST00000490999 LCORLQ8N3X6 602 aa18.59■□□□□ 0.57
SCAMP3-208ENST00000490999 MB21D1Q8N884 522 aa18.59■□□□□ 0.57
SCAMP3-208ENST00000490999 PPM1EQ8WY54 764 aa18.59■□□□□ 0.57
SCAMP3-208ENST00000490999 SYMPKQ92797 1274 aaKnown RBP18.59■□□□□ 0.57
SCAMP3-208ENST00000490999 MMP19Q99542 508 aa18.59■□□□□ 0.57
SCAMP3-208ENST00000490999 TMEM39AQ9NV64 488 aa18.59■□□□□ 0.57
SCAMP3-208ENST00000490999 SMIM22K7EJ46 135 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms