RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 LOC285556D6RIA3 1793 aa18.64■□□□□ 0.57
TRA2A-208ENST00000490942 TOP1P11387 765 aaKnown RBP18.64■□□□□ 0.57
TRA2A-208ENST00000490942 MCM5P33992 734 aa18.64■□□□□ 0.57
TRA2A-208ENST00000490942 SART3Q15020 963 aaKnown RBP18.64■□□□□ 0.57
TRA2A-208ENST00000490942 RASEFQ8IZ41 740 aa18.64■□□□□ 0.57
TRA2A-208ENST00000490942 UBAC1Q9BSL1 405 aa18.64■□□□□ 0.57
TRA2A-208ENST00000490942 WBP1LQ9NX94 342 aa18.64■□□□□ 0.57
TRA2A-208ENST00000490942 STX8Q9UNK0 236 aa18.64■□□□□ 0.57
TRA2A-208ENST00000490942 TAF6LQ9Y6J9 622 aa18.64■□□□□ 0.57
TRA2A-208ENST00000490942 BTBD19C9JJ37 291 aa18.63■□□□□ 0.57
TRA2A-208ENST00000490942 IGF2BP3O00425 579 aaKnown RBP eCLIP18.63■□□□□ 0.57
TRA2A-208ENST00000490942 PSMA5P28066 241 aa18.63■□□□□ 0.57
TRA2A-208ENST00000490942 GPAT2Q6NUI2 795 aa18.63■□□□□ 0.57
TRA2A-208ENST00000490942 NEK1Q96PY6 1258 aa18.63■□□□□ 0.57
TRA2A-208ENST00000490942 BEGAINQ9BUH8 593 aa18.63■□□□□ 0.57
TRA2A-208ENST00000490942 CLIP2Q9UDT6 1046 aa18.63■□□□□ 0.57
TRA2A-208ENST00000490942 PNMA3Q9UL41 463 aa18.63■□□□□ 0.57
TRA2A-208ENST00000490942 WDR46O15213 610 aaKnown RBP18.62■□□□□ 0.57
TRA2A-208ENST00000490942 NOM1Q5C9Z4 860 aaKnown RBP18.62■□□□□ 0.57
TRA2A-208ENST00000490942 RCSD1Q6JBY9 416 aa18.62■□□□□ 0.57
TRA2A-208ENST00000490942 CLEC10AQ8IUN9 316 aa18.62■□□□□ 0.57
TRA2A-208ENST00000490942 FAM43AQ8N2R8 423 aa18.62■□□□□ 0.57
TRA2A-208ENST00000490942 TMEM87BQ96K49 555 aa18.62■□□□□ 0.57
TRA2A-208ENST00000490942 TM6SF1Q9BZW5 370 aa18.62■□□□□ 0.57
TRA2A-208ENST00000490942 SNX14Q9Y5W7 946 aa18.62■□□□□ 0.57
TRA2A-208ENST00000490942 TNKSO95271 1327 aa18.61■□□□□ 0.57
TRA2A-208ENST00000490942 ERICH2A1L162 156 aa18.61■□□□□ 0.57
TRA2A-208ENST00000490942 F5H6K3 240 aa18.61■□□□□ 0.57
TRA2A-208ENST00000490942 NMT2O60551 498 aa18.61■□□□□ 0.57
TRA2A-208ENST00000490942 VCAM1P19320 739 aa18.61■□□□□ 0.57
TRA2A-208ENST00000490942 ATP2B2Q01814 1243 aa18.61■□□□□ 0.57
TRA2A-208ENST00000490942 KLRC3Q07444 240 aa18.61■□□□□ 0.57
TRA2A-208ENST00000490942 GADL1Q6ZQY3 521 aa18.61■□□□□ 0.57
TRA2A-208ENST00000490942 CYB5R4Q7L1T6 521 aa18.61■□□□□ 0.57
TRA2A-208ENST00000490942 DHX32Q7L7V1 743 aaKnown RBP18.61■□□□□ 0.57
TRA2A-208ENST00000490942 TMTC2Q8N394 836 aa18.61■□□□□ 0.57
TRA2A-208ENST00000490942 NKX2-3Q8TAU0 364 aa18.61■□□□□ 0.57
TRA2A-208ENST00000490942 PARK7Q99497 189 aaKnown RBP18.61■□□□□ 0.57
TRA2A-208ENST00000490942 MYPNQ86TC9 1320 aa18.6■□□□□ 0.57
TRA2A-208ENST00000490942 USP17L15C9J2P7 530 aa18.6■□□□□ 0.57
TRA2A-208ENST00000490942 USP17L13C9JLJ4 530 aa18.6■□□□□ 0.57
TRA2A-208ENST00000490942 USP17L11C9JVI0 530 aa18.6■□□□□ 0.57
TRA2A-208ENST00000490942 USP17L18D6R9N7 530 aa18.6■□□□□ 0.57
TRA2A-208ENST00000490942 USP17L22D6RA61 530 aa18.6■□□□□ 0.57
TRA2A-208ENST00000490942 USP17L17D6RBQ6 530 aa18.6■□□□□ 0.57
TRA2A-208ENST00000490942 USP17L19D6RCP7 530 aa18.6■□□□□ 0.57
TRA2A-208ENST00000490942 USP17L20D6RJB6 530 aa18.6■□□□□ 0.57
TRA2A-208ENST00000490942 PDHXO00330 501 aa18.6■□□□□ 0.57
TRA2A-208ENST00000490942 OSBPP22059 807 aa18.6■□□□□ 0.57
TRA2A-208ENST00000490942 USP17L24Q0WX57 530 aa18.6■□□□□ 0.57
TRA2A-208ENST00000490942 SEC23AQ15436 765 aa18.6■□□□□ 0.57
TRA2A-208ENST00000490942 FBXL16Q8N461 479 aa18.6■□□□□ 0.57
TRA2A-208ENST00000490942 ENAHQ8N8S7 591 aaPredicted RBP18.6■□□□□ 0.57
TRA2A-208ENST00000490942 GTF3C2Q8WUA4 911 aaPredicted RBP18.6■□□□□ 0.57
TRA2A-208ENST00000490942 GMCL1Q96IK5 515 aa18.6■□□□□ 0.57
TRA2A-208ENST00000490942 TMEM47Q9BQJ4 181 aa18.6■□□□□ 0.57
TRA2A-208ENST00000490942 RNF186Q9NXI6 227 aa18.6■□□□□ 0.57
TRA2A-208ENST00000490942 NDUFB10O96000 172 aa18.59■□□□□ 0.57
TRA2A-208ENST00000490942 LIFRP42702 1097 aa18.59■□□□□ 0.57
TRA2A-208ENST00000490942 ANTXR2P58335 489 aa18.59■□□□□ 0.57
TRA2A-208ENST00000490942 TREML2Q5T2D2 321 aa18.59■□□□□ 0.57
TRA2A-208ENST00000490942 UPF2Q9HAU5 1272 aaKnown RBP18.59■□□□□ 0.57
TRA2A-208ENST00000490942 ZFYVE28Q9HCC9 887 aa18.59■□□□□ 0.57
TRA2A-208ENST00000490942 IFIT3O14879 490 aaKnown RBP18.58■□□□□ 0.56
TRA2A-208ENST00000490942 PRC1O43663 620 aa18.58■□□□□ 0.56
TRA2A-208ENST00000490942 SEC24BO95487 1268 aa18.58■□□□□ 0.56
TRA2A-208ENST00000490942 EXOSC10Q01780 885 aaKnown RBP18.58■□□□□ 0.56
TRA2A-208ENST00000490942 ADCK5Q3MIX3 580 aa18.58■□□□□ 0.56
TRA2A-208ENST00000490942 IFIT1BQ5T764 474 aaKnown RBP18.58■□□□□ 0.56
TRA2A-208ENST00000490942 LBX2Q6XYB7 198 aa18.58■□□□□ 0.56
TRA2A-208ENST00000490942 CATSPERGQ6ZRH7 1159 aa18.58■□□□□ 0.56
TRA2A-208ENST00000490942 LRRC47Q8N1G4 583 aaKnown RBP18.58■□□□□ 0.56
TRA2A-208ENST00000490942 IL27Q8NEV9 243 aa18.58■□□□□ 0.56
TRA2A-208ENST00000490942 IGDCC4Q8TDY8 1250 aa18.58■□□□□ 0.56
TRA2A-208ENST00000490942 DCAF4Q8WV16 495 aa18.58■□□□□ 0.56
TRA2A-208ENST00000490942 KAT14Q9H8E8 782 aa18.58■□□□□ 0.56
TRA2A-208ENST00000490942 PLA2G6O60733 806 aa18.57■□□□□ 0.56
TRA2A-208ENST00000490942 SNHG28P0DPA3 235 aa18.57■□□□□ 0.56
TRA2A-208ENST00000490942 GCLCP48506 637 aaPredicted RBP18.57■□□□□ 0.56
TRA2A-208ENST00000490942 WTAPQ15007 396 aa18.57■□□□□ 0.56
TRA2A-208ENST00000490942 TAF1CQ15572 869 aaPredicted RBP18.57■□□□□ 0.56
TRA2A-208ENST00000490942 ZYXQ15942 572 aaKnown RBP18.57■□□□□ 0.56
TRA2A-208ENST00000490942 SLFN13Q68D06 897 aa18.57■□□□□ 0.56
TRA2A-208ENST00000490942 BLOC1S2Q6QNY1 142 aa18.57■□□□□ 0.56
TRA2A-208ENST00000490942 JAKMIP1Q96N16 626 aaKnown RBP18.57■□□□□ 0.56
TRA2A-208ENST00000490942 ZKSCAN3Q9BRR0 538 aa18.57■□□□□ 0.56
TRA2A-208ENST00000490942 RPAP3Q9H6T3 665 aaPredicted RBP18.57■□□□□ 0.56
TRA2A-208ENST00000490942 ZSWIM6Q9HCJ5 1215 aa18.57■□□□□ 0.56
TRA2A-208ENST00000490942 HOXC10Q9NYD6 342 aa18.57■□□□□ 0.56
TRA2A-208ENST00000490942 ADGRA2Q96PE1 1338 aa18.56■□□□□ 0.56
TRA2A-208ENST00000490942 TLR2O60603 784 aa18.56■□□□□ 0.56
TRA2A-208ENST00000490942 IRX3P78415 501 aaPredicted RBP18.56■□□□□ 0.56
TRA2A-208ENST00000490942 COG2Q14746 738 aa18.56■□□□□ 0.56
TRA2A-208ENST00000490942 TMEM67Q5HYA8 995 aa18.56■□□□□ 0.56
TRA2A-208ENST00000490942 KIAA1755Q5JYT7 1200 aa18.56■□□□□ 0.56
TRA2A-208ENST00000490942 SGMS1Q86VZ5 419 aa18.56■□□□□ 0.56
TRA2A-208ENST00000490942 PNMA1Q8ND90 353 aa18.56■□□□□ 0.56
TRA2A-208ENST00000490942 BACH2Q9BYV9 841 aa18.56■□□□□ 0.56
TRA2A-208ENST00000490942 ASCC2Q9H1I8 757 aaPredicted RBP18.56■□□□□ 0.56
TRA2A-208ENST00000490942 MYH4Q9Y623 1939 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms