RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 AK2P54819 239 aa12.8□□□□□ -0.36
VARS2-210ENST00000490699 ANTXR2P58335 489 aa12.8□□□□□ -0.36
VARS2-210ENST00000490699 PPATQ06203 517 aa12.8□□□□□ -0.36
VARS2-210ENST00000490699 NOL8Q76FK4 1167 aaKnown RBP12.8□□□□□ -0.36
VARS2-210ENST00000490699 ZNF280CQ8ND82 737 aa12.8□□□□□ -0.36
VARS2-210ENST00000490699 PNMA1Q8ND90 353 aa12.8□□□□□ -0.36
VARS2-210ENST00000490699 CTCFLQ8NI51 663 aaPredicted RBP12.8□□□□□ -0.36
VARS2-210ENST00000490699 KIF2CQ99661 725 aa12.8□□□□□ -0.36
VARS2-210ENST00000490699 LY9Q9HBG7 655 aa12.8□□□□□ -0.36
VARS2-210ENST00000490699 SH2B1Q9NRF2 756 aaPredicted RBP12.8□□□□□ -0.36
VARS2-210ENST00000490699 FZD1Q9UP38 647 aa12.8□□□□□ -0.36
VARS2-210ENST00000490699 LIMCH1Q9UPQ0 1083 aa12.8□□□□□ -0.36
VARS2-210ENST00000490699 TACC3Q9Y6A5 838 aa12.8□□□□□ -0.36
VARS2-210ENST00000490699 ZHX2Q9Y6X8 837 aa12.8□□□□□ -0.36
VARS2-210ENST00000490699 PASKQ96RG2 1323 aa12.8□□□□□ -0.36
VARS2-210ENST00000490699 MYH4Q9Y623 1939 aa12.8□□□□□ -0.36
VARS2-210ENST00000490699 OTOFQ9HC10 1997 aa12.8□□□□□ -0.36
VARS2-210ENST00000490699 IGKV6D-41A0A0C4DH26 115 aa12.79□□□□□ -0.36
VARS2-210ENST00000490699 C19orf81C9J6K1 198 aa12.79□□□□□ -0.36
VARS2-210ENST00000490699 USP17L10C9JJH3 530 aa12.79□□□□□ -0.36
VARS2-210ENST00000490699 ZBTB43O43298 467 aa12.79□□□□□ -0.36
VARS2-210ENST00000490699 RCAN1P53805 252 aa12.79□□□□□ -0.36
VARS2-210ENST00000490699 PPP2R5BQ15173 497 aa12.79□□□□□ -0.36
VARS2-210ENST00000490699 LDLRAD1Q5T700 205 aa12.79□□□□□ -0.36
VARS2-210ENST00000490699 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.79□□□□□ -0.36
VARS2-210ENST00000490699 SGMS1Q86VZ5 419 aa12.79□□□□□ -0.36
VARS2-210ENST00000490699 ZNF654Q8IZM8 581 aa12.79□□□□□ -0.36
VARS2-210ENST00000490699 IGDCC4Q8TDY8 1250 aa12.79□□□□□ -0.36
VARS2-210ENST00000490699 NUP133Q8WUM0 1156 aa12.79□□□□□ -0.36
VARS2-210ENST00000490699 ANKS1AQ92625 1134 aa12.79□□□□□ -0.36
VARS2-210ENST00000490699 TMEM47Q9BQJ4 181 aa12.79□□□□□ -0.36
VARS2-210ENST00000490699 WDR18Q9BV38 432 aa12.79□□□□□ -0.36
VARS2-210ENST00000490699 SLKQ9H2G2 1235 aaPredicted RBP12.79□□□□□ -0.36
VARS2-210ENST00000490699 IL17RBQ9NRM6 502 aa12.79□□□□□ -0.36
VARS2-210ENST00000490699 SNCAIPQ9Y6H5 919 aa12.79□□□□□ -0.36
VARS2-210ENST00000490699 GREB1LQ9C091 1923 aaPredicted RBP12.79□□□□□ -0.36
VARS2-210ENST00000490699 SPDYE5A6NIY4 337 aa12.78□□□□□ -0.36
VARS2-210ENST00000490699 TRIM75PA6NK02 468 aa12.78□□□□□ -0.36
VARS2-210ENST00000490699 GOLGA8AA7E2F4 631 aa12.78□□□□□ -0.36
VARS2-210ENST00000490699 CPLX1O14810 134 aa12.78□□□□□ -0.36
VARS2-210ENST00000490699 GNAQP50148 359 aa12.78□□□□□ -0.36
VARS2-210ENST00000490699 METAP2P50579 478 aaKnown RBP eCLIP12.78□□□□□ -0.36
VARS2-210ENST00000490699 ZNF157P51786 506 aaPredicted RBP12.78□□□□□ -0.36
VARS2-210ENST00000490699 APOBRQ0VD83 1088 aa12.78□□□□□ -0.36
VARS2-210ENST00000490699 SPP2Q13103 211 aa12.78□□□□□ -0.36
VARS2-210ENST00000490699 PPIL2Q13356 520 aa12.78□□□□□ -0.36
VARS2-210ENST00000490699 SEC23AQ15436 765 aa12.78□□□□□ -0.36
VARS2-210ENST00000490699 CCDC96Q2M329 555 aa12.78□□□□□ -0.36
VARS2-210ENST00000490699 USP17L2Q6R6M4 530 aa12.78□□□□□ -0.36
VARS2-210ENST00000490699 PAXIP1Q6ZW49 1069 aaPredicted RBP12.78□□□□□ -0.36
VARS2-210ENST00000490699 MOB2Q70IA6 237 aa12.78□□□□□ -0.36
VARS2-210ENST00000490699 MICU3Q86XE3 530 aa12.78□□□□□ -0.36
VARS2-210ENST00000490699 LRRC47Q8N1G4 583 aaKnown RBP12.78□□□□□ -0.36
VARS2-210ENST00000490699 DCAF4Q8WV16 495 aa12.78□□□□□ -0.36
VARS2-210ENST00000490699 LPAR1Q92633 364 aa12.78□□□□□ -0.36
VARS2-210ENST00000490699 MKL1Q969V6 931 aa12.78□□□□□ -0.36
VARS2-210ENST00000490699 OPTNQ96CV9 577 aa12.78□□□□□ -0.36
VARS2-210ENST00000490699 AGXT2Q9BYV1 514 aa12.78□□□□□ -0.36
VARS2-210ENST00000490699 KIAA1683Q9H0B3 1180 aa12.78□□□□□ -0.36
VARS2-210ENST00000490699 RBM28Q9NW13 759 aaKnown RBP12.78□□□□□ -0.36
VARS2-210ENST00000490699 MTMR7Q9Y216 660 aa12.78□□□□□ -0.36
VARS2-210ENST00000490699 TMX2Q9Y320 296 aa12.78□□□□□ -0.36
VARS2-210ENST00000490699 CDKL5O76039 1030 aa12.77□□□□□ -0.37
VARS2-210ENST00000490699 PARP1P09874 1014 aaKnown RBP12.77□□□□□ -0.37
VARS2-210ENST00000490699 ZBTB48P10074 688 aaPredicted RBP12.77□□□□□ -0.37
VARS2-210ENST00000490699 SLC1A4P43007 532 aa12.77□□□□□ -0.37
VARS2-210ENST00000490699 FMR1Q06787 632 aaKnown RBP eCLIP12.77□□□□□ -0.37
VARS2-210ENST00000490699 IKQ13123 557 aaPredicted RBP12.77□□□□□ -0.37
VARS2-210ENST00000490699 PABPC4Q13310 644 aaKnown RBP eCLIP12.77□□□□□ -0.37
VARS2-210ENST00000490699 SNAPC2Q13487 334 aa12.77□□□□□ -0.37
VARS2-210ENST00000490699 MTMR2Q13614 643 aa12.77□□□□□ -0.37
VARS2-210ENST00000490699 RRP1BQ14684 758 aaKnown RBP12.77□□□□□ -0.37
VARS2-210ENST00000490699 ZYXQ15942 572 aaKnown RBP12.77□□□□□ -0.37
VARS2-210ENST00000490699 ASPRV1Q53RT3 343 aa12.77□□□□□ -0.37
VARS2-210ENST00000490699 GPATCH4Q5T3I0 446 aaKnown RBP12.77□□□□□ -0.37
VARS2-210ENST00000490699 CST9Q5W186 159 aa12.77□□□□□ -0.37
VARS2-210ENST00000490699 APOA5Q6Q788 366 aa12.77□□□□□ -0.37
VARS2-210ENST00000490699 CLEC10AQ8IUN9 316 aa12.77□□□□□ -0.37
VARS2-210ENST00000490699 GMCL1P1Q8NEA9 526 aa12.77□□□□□ -0.37
VARS2-210ENST00000490699 SNX21Q969T3 373 aa12.77□□□□□ -0.37
VARS2-210ENST00000490699 CCDC102AQ96A19 550 aa12.77□□□□□ -0.37
VARS2-210ENST00000490699 ZNF274Q96GC6 653 aaPredicted RBP12.77□□□□□ -0.37
VARS2-210ENST00000490699 MAP3K14Q99558 947 aa12.77□□□□□ -0.37
VARS2-210ENST00000490699 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.77□□□□□ -0.37
VARS2-210ENST00000490699 TLL2Q9Y6L7 1015 aa12.77□□□□□ -0.37
VARS2-210ENST00000490699 K7ELQ4 463 aaPredicted RBP12.76□□□□□ -0.37
VARS2-210ENST00000490699 CXCL11O14625 94 aa12.76□□□□□ -0.37
VARS2-210ENST00000490699 GUCY1A2P33402 732 aa12.76□□□□□ -0.37
VARS2-210ENST00000490699 APLP1P51693 650 aa12.76□□□□□ -0.37
VARS2-210ENST00000490699 GTF2A2P52657 109 aa12.76□□□□□ -0.37
VARS2-210ENST00000490699 BACE1P56817 501 aa12.76□□□□□ -0.37
VARS2-210ENST00000490699 TOB2Q14106 344 aaPredicted RBP12.76□□□□□ -0.37
VARS2-210ENST00000490699 RTN1Q16799 776 aa12.76□□□□□ -0.37
VARS2-210ENST00000490699 SLFN13Q68D06 897 aa12.76□□□□□ -0.37
VARS2-210ENST00000490699 RCSD1Q6JBY9 416 aa12.76□□□□□ -0.37
VARS2-210ENST00000490699 RGMBQ6NW40 437 aa12.76□□□□□ -0.37
VARS2-210ENST00000490699 FASTKD5Q7L8L6 764 aaKnown RBP12.76□□□□□ -0.37
VARS2-210ENST00000490699 SAPCD2Q86UD0 394 aa12.76□□□□□ -0.37
VARS2-210ENST00000490699 HHIPL1Q96JK4 782 aa12.76□□□□□ -0.37
VARS2-210ENST00000490699 CLMNQ96JQ2 1002 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms