RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 AXIN1O15169 862 aa8.96□□□□□ -0.98
PRPF4B-208ENST00000490653 MYCP01106 439 aaPredicted RBP8.96□□□□□ -0.98
PRPF4B-208ENST00000490653 LDHCP07864 332 aa8.96□□□□□ -0.98
PRPF4B-208ENST00000490653 CETPP11597 493 aa8.96□□□□□ -0.98
PRPF4B-208ENST00000490653 SNAPC2Q13487 334 aa8.96□□□□□ -0.98
PRPF4B-208ENST00000490653 SLFNL1Q499Z3 407 aa8.96□□□□□ -0.98
PRPF4B-208ENST00000490653 MSS51Q4VC12 460 aa8.96□□□□□ -0.98
PRPF4B-208ENST00000490653 NOL9Q5SY16 702 aaKnown RBP8.96□□□□□ -0.98
PRPF4B-208ENST00000490653 SMYD5Q6GMV2 418 aa8.96□□□□□ -0.98
PRPF4B-208ENST00000490653 OTUD7BQ6GQQ9 843 aa8.96□□□□□ -0.98
PRPF4B-208ENST00000490653 NAA16Q6N069 864 aaPredicted RBP8.96□□□□□ -0.98
PRPF4B-208ENST00000490653 AACSQ86V21 672 aa8.96□□□□□ -0.98
PRPF4B-208ENST00000490653 TEX11Q8IYF3 940 aa8.96□□□□□ -0.98
PRPF4B-208ENST00000490653 RHPN1Q8TCX5 695 aa8.96□□□□□ -0.98
PRPF4B-208ENST00000490653 SH3TC2Q8TF17 1288 aa8.96□□□□□ -0.98
PRPF4B-208ENST00000490653 TGFBRAP1Q8WUH2 860 aa8.96□□□□□ -0.98
PRPF4B-208ENST00000490653 GCC1Q96CN9 775 aa8.96□□□□□ -0.98
PRPF4B-208ENST00000490653 EDC3Q96F86 508 aaKnown RBP8.96□□□□□ -0.98
PRPF4B-208ENST00000490653 ZFYVE28Q9HCC9 887 aa8.96□□□□□ -0.98
PRPF4B-208ENST00000490653 PRDM9Q9NQV7 894 aa8.96□□□□□ -0.98
PRPF4B-208ENST00000490653 CPA4Q9UI42 421 aa8.96□□□□□ -0.98
PRPF4B-208ENST00000490653 KCNH4Q9UQ05 1017 aa8.96□□□□□ -0.98
PRPF4B-208ENST00000490653 ZHX2Q9Y6X8 837 aa8.96□□□□□ -0.98
PRPF4B-208ENST00000490653 TRIOBPQ9H2D6 2365 aa8.96□□□□□ -0.98
PRPF4B-208ENST00000490653 PDHXO00330 501 aa8.95□□□□□ -0.98
PRPF4B-208ENST00000490653 SMARCA5O60264 1052 aaPredicted RBP8.95□□□□□ -0.98
PRPF4B-208ENST00000490653 CHGBP05060 677 aa8.95□□□□□ -0.98
PRPF4B-208ENST00000490653 PTPRAP18433 802 aa8.95□□□□□ -0.98
PRPF4B-208ENST00000490653 CYP7A1P22680 504 aa8.95□□□□□ -0.98
PRPF4B-208ENST00000490653 GSTO1P78417 241 aa8.95□□□□□ -0.98
PRPF4B-208ENST00000490653 MTFR1Q15390 333 aa8.95□□□□□ -0.98
PRPF4B-208ENST00000490653 SLC4A8Q2Y0W8 1093 aa8.95□□□□□ -0.98
PRPF4B-208ENST00000490653 C17orf99Q6UX52 265 aa8.95□□□□□ -0.98
PRPF4B-208ENST00000490653 MAPKAPK5Q8IW41 473 aa8.95□□□□□ -0.98
PRPF4B-208ENST00000490653 NLRP7Q8WX94 980 aa8.95□□□□□ -0.98
PRPF4B-208ENST00000490653 HOOK2Q96ED9 719 aa8.95□□□□□ -0.98
PRPF4B-208ENST00000490653 ERO1AQ96HE7 468 aa8.95□□□□□ -0.98
PRPF4B-208ENST00000490653 ZNF512BQ96KM6 892 aaPredicted RBP8.95□□□□□ -0.98
PRPF4B-208ENST00000490653 OSBPL5Q9H0X9 879 aaPredicted RBP8.95□□□□□ -0.98
PRPF4B-208ENST00000490653 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.95□□□□□ -0.98
PRPF4B-208ENST00000490653 GMPR2Q9P2T1 348 aaKnown RBP8.95□□□□□ -0.98
PRPF4B-208ENST00000490653 SAP30BPQ9UHR5 308 aaKnown RBP8.95□□□□□ -0.98
PRPF4B-208ENST00000490653 AFG3L2Q9Y4W6 797 aa8.95□□□□□ -0.98
PRPF4B-208ENST00000490653 TLR2O60603 784 aa8.94□□□□□ -0.98
PRPF4B-208ENST00000490653 CYP2C8P10632 490 aa8.94□□□□□ -0.98
PRPF4B-208ENST00000490653 SCYL3Q8IZE3 742 aa8.94□□□□□ -0.98
PRPF4B-208ENST00000490653 MIGA1Q8NAN2 632 aa8.94□□□□□ -0.98
PRPF4B-208ENST00000490653 PHOX2BQ99453 314 aa8.94□□□□□ -0.98
PRPF4B-208ENST00000490653 PALD1Q9ULE6 856 aa8.94□□□□□ -0.98
PRPF4B-208ENST00000490653 ADGRA2Q96PE1 1338 aa8.94□□□□□ -0.98
PRPF4B-208ENST00000490653 CEP290O15078 2479 aa8.94□□□□□ -0.98
PRPF4B-208ENST00000490653 A0A0C4DFX4 3053 aa8.94□□□□□ -0.98
PRPF4B-208ENST00000490653 CXCL11O14625 94 aa8.93□□□□□ -0.98
PRPF4B-208ENST00000490653 CTNND1O60716 968 aaKnown RBP8.93□□□□□ -0.98
PRPF4B-208ENST00000490653 IDH1O75874 414 aaKnown RBP8.93□□□□□ -0.98
PRPF4B-208ENST00000490653 GADL1Q6ZQY3 521 aa8.93□□□□□ -0.98
PRPF4B-208ENST00000490653 ANKRD23Q86SG2 305 aa8.93□□□□□ -0.98
PRPF4B-208ENST00000490653 RPAP2Q8IXW5 612 aaPredicted RBP8.93□□□□□ -0.98
PRPF4B-208ENST00000490653 MAGEB6Q8N7X4 407 aa8.93□□□□□ -0.98
PRPF4B-208ENST00000490653 DNAJC18Q9H819 358 aa8.93□□□□□ -0.98
PRPF4B-208ENST00000490653 DDX19BQ9UMR2 479 aa8.93□□□□□ -0.98
PRPF4B-208ENST00000490653 SIPA1L1O43166 1804 aa8.92□□□□□ -0.98
PRPF4B-208ENST00000490653 PHIPQ8WWQ0 1821 aa8.92□□□□□ -0.98
PRPF4B-208ENST00000490653 DOCK2Q92608 1830 aa8.92□□□□□ -0.98
PRPF4B-208ENST00000490653 A0A0G2JLL6 359 aaPredicted RBP8.92□□□□□ -0.98
PRPF4B-208ENST00000490653 TRIM75PA6NK02 468 aa8.92□□□□□ -0.98
PRPF4B-208ENST00000490653 SOX1O00570 391 aaPredicted RBP8.92□□□□□ -0.98
PRPF4B-208ENST00000490653 PEX10O60683 326 aa8.92□□□□□ -0.98
PRPF4B-208ENST00000490653 MS4A1P11836 297 aa8.92□□□□□ -0.98
PRPF4B-208ENST00000490653 CAP2P40123 477 aa8.92□□□□□ -0.98
PRPF4B-208ENST00000490653 LACTBP83111 547 aaPredicted RBP8.92□□□□□ -0.98
PRPF4B-208ENST00000490653 SPP2Q13103 211 aa8.92□□□□□ -0.98
PRPF4B-208ENST00000490653 TREML2Q5T2D2 321 aa8.92□□□□□ -0.98
PRPF4B-208ENST00000490653 RNF19BQ6ZMZ0 732 aa8.92□□□□□ -0.98
PRPF4B-208ENST00000490653 PRRT2Q7Z6L0 340 aaPredicted RBP8.92□□□□□ -0.98
PRPF4B-208ENST00000490653 BOLA2Q9H3K6 86 aa8.92□□□□□ -0.98
PRPF4B-208ENST00000490653 PICK1Q9NRD5 415 aa8.92□□□□□ -0.98
PRPF4B-208ENST00000490653 CDK5RAP2Q96SN8 1893 aa8.91□□□□□ -0.98
PRPF4B-208ENST00000490653 FLT1P17948 1338 aa8.91□□□□□ -0.98
PRPF4B-208ENST00000490653 SMIM22K7EJ46 135 aa8.91□□□□□ -0.98
PRPF4B-208ENST00000490653 GOLIM4O00461 696 aa8.91□□□□□ -0.98
PRPF4B-208ENST00000490653 WNT7AO00755 349 aa8.91□□□□□ -0.98
PRPF4B-208ENST00000490653 ZBTB24O43167 697 aaPredicted RBP8.91□□□□□ -0.98
PRPF4B-208ENST00000490653 GDF11O95390 407 aa8.91□□□□□ -0.98
PRPF4B-208ENST00000490653 BAG3O95817 575 aa8.91□□□□□ -0.98
PRPF4B-208ENST00000490653 PSMC4P43686 418 aa8.91□□□□□ -0.98
PRPF4B-208ENST00000490653 ERC1Q8IUD2 1116 aa8.91□□□□□ -0.98
PRPF4B-208ENST00000490653 KIF1BPQ96EK5 621 aa8.91□□□□□ -0.98
PRPF4B-208ENST00000490653 TRIM47Q96LD4 638 aa8.91□□□□□ -0.98
PRPF4B-208ENST00000490653 GABRQQ9UN88 632 aa8.91□□□□□ -0.98
PRPF4B-208ENST00000490653 DOCK3Q8IZD9 2030 aa8.9□□□□□ -0.98
PRPF4B-208ENST00000490653 TTC24A2A3L6 582 aaPredicted RBP8.9□□□□□ -0.98
PRPF4B-208ENST00000490653 PRKAB2O43741 272 aa8.9□□□□□ -0.98
PRPF4B-208ENST00000490653 WFS1O76024 890 aa8.9□□□□□ -0.98
PRPF4B-208ENST00000490653 MAP4K4O95819 1239 aaPredicted RBP8.9□□□□□ -0.98
PRPF4B-208ENST00000490653 BCRP11274 1271 aa8.9□□□□□ -0.98
PRPF4B-208ENST00000490653 PLCD1P51178 756 aa8.9□□□□□ -0.98
PRPF4B-208ENST00000490653 PDE3AQ14432 1141 aa8.9□□□□□ -0.98
PRPF4B-208ENST00000490653 SLC9C1Q4G0N8 1177 aa8.9□□□□□ -0.98
PRPF4B-208ENST00000490653 METTL16Q86W50 562 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms