RNA–Protein interactions for RNA: ENST00000490552.1

USP34-218, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 2

Gene USP34, Length 1,793 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-218ENST00000490552 SHTN1A0MZ66 631 aa10.95□□□□□ -0.66
USP34-218ENST00000490552 IQCA1LA6NCM1 817 aa10.95□□□□□ -0.66
USP34-218ENST00000490552 PALM3A6NDB9 673 aaPredicted RBP10.95□□□□□ -0.66
USP34-218ENST00000490552 EGFRP00533 1210 aa10.95□□□□□ -0.66
USP34-218ENST00000490552 ASNSP08243 561 aa10.95□□□□□ -0.66
USP34-218ENST00000490552 ICA1Q05084 483 aa10.95□□□□□ -0.66
USP34-218ENST00000490552 FUT2Q10981 343 aa10.95□□□□□ -0.66
USP34-218ENST00000490552 SAFBQ15424 915 aaKnown RBP eCLIP10.95□□□□□ -0.66
USP34-218ENST00000490552 CDC37L1Q7L3B6 337 aa10.95□□□□□ -0.66
USP34-218ENST00000490552 ZC3H15Q8WU90 426 aaKnown RBP10.95□□□□□ -0.66
USP34-218ENST00000490552 PHKBQ93100 1093 aa10.95□□□□□ -0.66
USP34-218ENST00000490552 SIPA1L1O43166 1804 aa10.95□□□□□ -0.66
USP34-218ENST00000490552 GLTPD2A6NH11 291 aa10.94□□□□□ -0.66
USP34-218ENST00000490552 SNHG28P0DPA3 235 aa10.94□□□□□ -0.66
USP34-218ENST00000490552 EPS15P42566 896 aa10.94□□□□□ -0.66
USP34-218ENST00000490552 SKOR2Q2VWA4 1001 aaPredicted RBP10.94□□□□□ -0.66
USP34-218ENST00000490552 SUPT20HL1Q3ZLR7 823 aa10.94□□□□□ -0.66
USP34-218ENST00000490552 ANGEL2Q5VTE6 544 aaKnown RBP10.94□□□□□ -0.66
USP34-218ENST00000490552 USP50Q70EL3 339 aaPredicted RBP10.94□□□□□ -0.66
USP34-218ENST00000490552 BRAPQ7Z569 592 aa10.94□□□□□ -0.66
USP34-218ENST00000490552 GMCL1P1Q8NEA9 526 aa10.94□□□□□ -0.66
USP34-218ENST00000490552 TEPSINQ96N21 525 aa10.94□□□□□ -0.66
USP34-218ENST00000490552 SPZ1Q9BXG8 430 aa10.94□□□□□ -0.66
USP34-218ENST00000490552 ARHGEF10LQ9HCE6 1279 aa10.94□□□□□ -0.66
USP34-218ENST00000490552 MAD2L2Q9UI95 211 aa10.94□□□□□ -0.66
USP34-218ENST00000490552 GH2P01242 217 aa10.93□□□□□ -0.66
USP34-218ENST00000490552 PDHBP11177 359 aa10.93□□□□□ -0.66
USP34-218ENST00000490552 EEF2P13639 858 aaKnown RBP10.93□□□□□ -0.66
USP34-218ENST00000490552 CAP2P40123 477 aa10.93□□□□□ -0.66
USP34-218ENST00000490552 KRT85P78386 507 aa10.93□□□□□ -0.66
USP34-218ENST00000490552 DCAF4Q8WV16 495 aa10.93□□□□□ -0.66
USP34-218ENST00000490552 DCPSQ96C86 337 aaKnown RBP10.93□□□□□ -0.66
USP34-218ENST00000490552 SCAND2PQ9GZW5 306 aaPredicted RBP10.93□□□□□ -0.66
USP34-218ENST00000490552 SH3GLB2Q9NR46 395 aa10.93□□□□□ -0.66
USP34-218ENST00000490552 CFAP45Q9UL16 551 aa10.93□□□□□ -0.66
USP34-218ENST00000490552 CNTNAP5Q8WYK1 1306 aa10.93□□□□□ -0.66
USP34-218ENST00000490552 FAM196BA6NMK8 535 aa10.93□□□□□ -0.66
USP34-218ENST00000490552 KLRF2D3W0D1 207 aa10.93□□□□□ -0.66
USP34-218ENST00000490552 hCG_1984214I3L0E3 225 aa10.93□□□□□ -0.66
USP34-218ENST00000490552 CTNND1O60716 968 aaKnown RBP10.93□□□□□ -0.66
USP34-218ENST00000490552 PLEKHA8P1O95397 391 aa10.93□□□□□ -0.66
USP34-218ENST00000490552 SEPT2Q15019 361 aa10.93□□□□□ -0.66
USP34-218ENST00000490552 SRBD1Q8N5C6 995 aaKnown RBP10.93□□□□□ -0.66
USP34-218ENST00000490552 ZNF713Q8N859 430 aaPredicted RBP10.93□□□□□ -0.66
USP34-218ENST00000490552 TRPM4Q8TD43 1214 aa10.93□□□□□ -0.66
USP34-218ENST00000490552 CCDC12Q8WUD4 166 aaPredicted RBP10.93□□□□□ -0.66
USP34-218ENST00000490552 ZNF341Q9BYN7 854 aa10.93□□□□□ -0.66
USP34-218ENST00000490552 BRMS1Q9HCU9 246 aa10.93□□□□□ -0.66
USP34-218ENST00000490552 GGA3Q9NZ52 723 aa10.93□□□□□ -0.66
USP34-218ENST00000490552 ZBTB21Q9ULJ3 1066 aa10.93□□□□□ -0.66
USP34-218ENST00000490552 V9GY48 417 aaPredicted RBP10.93□□□□□ -0.66
USP34-218ENST00000490552 DCAF8L1A6NGE4 600 aa10.92□□□□□ -0.66
USP34-218ENST00000490552 GDF11O95390 407 aa10.92□□□□□ -0.66
USP34-218ENST00000490552 SCG2P13521 617 aa10.92□□□□□ -0.66
USP34-218ENST00000490552 ATP2B2Q01814 1243 aa10.92□□□□□ -0.66
USP34-218ENST00000490552 ZNF543Q08ER8 600 aa10.92□□□□□ -0.66
USP34-218ENST00000490552 GNL2Q13823 731 aaKnown RBP10.92□□□□□ -0.66
USP34-218ENST00000490552 PFKFB3Q16875 520 aaPredicted RBP10.92□□□□□ -0.66
USP34-218ENST00000490552 FOXD4L5Q5VV16 416 aaPredicted RBP10.92□□□□□ -0.66
USP34-218ENST00000490552 KRT40Q6A162 431 aa10.92□□□□□ -0.66
USP34-218ENST00000490552 MCTP1Q6DN14 999 aa10.92□□□□□ -0.66
USP34-218ENST00000490552 GALNT17Q6IS24 598 aa10.92□□□□□ -0.66
USP34-218ENST00000490552 MIGA2Q7L4E1 593 aa10.92□□□□□ -0.66
USP34-218ENST00000490552 PNMA8AQ86V59 439 aaPredicted RBP10.92□□□□□ -0.66
USP34-218ENST00000490552 SULF1Q8IWU6 871 aa10.92□□□□□ -0.66
USP34-218ENST00000490552 CCDC82Q8N4S0 544 aa10.92□□□□□ -0.66
USP34-218ENST00000490552 FOXD4L4Q8WXT5 416 aaPredicted RBP10.92□□□□□ -0.66
USP34-218ENST00000490552 RRP36Q96EU6 259 aaKnown RBP10.92□□□□□ -0.66
USP34-218ENST00000490552 GMCL1Q96IK5 515 aa10.92□□□□□ -0.66
USP34-218ENST00000490552 ZNF396Q96N95 335 aaPredicted RBP10.92□□□□□ -0.66
USP34-218ENST00000490552 GOPCQ9HD26 462 aa10.92□□□□□ -0.66
USP34-218ENST00000490552 SEC63Q9UGP8 760 aaKnown RBP10.92□□□□□ -0.66
USP34-218ENST00000490552 PHF20L1A8MW92 1017 aa10.91□□□□□ -0.66
USP34-218ENST00000490552 MMP1P03956 469 aa10.91□□□□□ -0.66
USP34-218ENST00000490552 NCLP19338 710 aaKnown RBP10.91□□□□□ -0.66
USP34-218ENST00000490552 CALML3P27482 149 aa10.91□□□□□ -0.66
USP34-218ENST00000490552 GUCY1A2P33402 732 aa10.91□□□□□ -0.66
USP34-218ENST00000490552 SLC1A4P43007 532 aa10.91□□□□□ -0.66
USP34-218ENST00000490552 RESTQ13127 1097 aa10.91□□□□□ -0.66
USP34-218ENST00000490552 USP48Q86UV5 1035 aa10.91□□□□□ -0.66
USP34-218ENST00000490552 FERMT3Q86UX7 667 aa10.91□□□□□ -0.66
USP34-218ENST00000490552 LRRC47Q8N1G4 583 aaKnown RBP10.91□□□□□ -0.66
USP34-218ENST00000490552 TMEM87AQ8NBN3 555 aa10.91□□□□□ -0.66
USP34-218ENST00000490552 CCDC148Q8NFR7 591 aa10.91□□□□□ -0.66
USP34-218ENST00000490552 FOXP1Q9H334 677 aaPredicted RBP10.91□□□□□ -0.66
USP34-218ENST00000490552 TMX2Q9Y320 296 aa10.91□□□□□ -0.66
USP34-218ENST00000490552 USP17L5A8MUK1 530 aa10.9□□□□□ -0.66
USP34-218ENST00000490552 PPFIA3O75145 1194 aa10.9□□□□□ -0.66
USP34-218ENST00000490552 U2AF2P26368 475 aaKnown RBP eCLIP10.9□□□□□ -0.662e-6■■□□□ 12.6
USP34-218ENST00000490552 EPHX2P34913 555 aa10.9□□□□□ -0.66
USP34-218ENST00000490552 HIRAP54198 1017 aaPredicted RBP10.9□□□□□ -0.66
USP34-218ENST00000490552 PKN1Q16512 942 aa10.9□□□□□ -0.66
USP34-218ENST00000490552 SLFN13Q68D06 897 aa10.9□□□□□ -0.66
USP34-218ENST00000490552 USP17L2Q6R6M4 530 aa10.9□□□□□ -0.66
USP34-218ENST00000490552 CMTR1Q8N1G2 835 aaKnown RBP10.9□□□□□ -0.66
USP34-218ENST00000490552 STAG2Q8N3U4 1231 aa10.9□□□□□ -0.66
USP34-218ENST00000490552 RIOX1Q9H6W3 641 aa10.9□□□□□ -0.66
USP34-218ENST00000490552 ZNF112Q9UJU3 913 aa10.9□□□□□ -0.66
USP34-218ENST00000490552 ELP1O95163 1332 aa10.9□□□□□ -0.66
USP34-218ENST00000490552 F5H6K3 240 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms