RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 ACRP10323 421 aa16.94■□□□□ 0.3
EXOSC3-207ENST00000490516 VCAM1P19320 739 aa16.94■□□□□ 0.3
EXOSC3-207ENST00000490516 GSTO1P78417 241 aa16.94■□□□□ 0.3
EXOSC3-207ENST00000490516 MFSD5Q6N075 450 aa16.94■□□□□ 0.3
EXOSC3-207ENST00000490516 PI16Q6UXB8 463 aa16.94■□□□□ 0.3
EXOSC3-207ENST00000490516 ANKRD33Q7Z3H0 272 aa16.94■□□□□ 0.3
EXOSC3-207ENST00000490516 METTL16Q86W50 562 aaKnown RBP16.94■□□□□ 0.3
EXOSC3-207ENST00000490516 MOV10L1Q9BXT6 1211 aaKnown RBP16.94■□□□□ 0.3
EXOSC3-207ENST00000490516 YBX2Q9Y2T7 364 aaKnown RBP16.94■□□□□ 0.3
EXOSC3-207ENST00000490516 GH2P01242 217 aa16.93■□□□□ 0.3
EXOSC3-207ENST00000490516 CSF2RAP15509 400 aa16.93■□□□□ 0.3
EXOSC3-207ENST00000490516 MRE11P49959 708 aa16.93■□□□□ 0.3
EXOSC3-207ENST00000490516 PPIGQ13427 754 aaKnown RBP eCLIP16.93■□□□□ 0.3
EXOSC3-207ENST00000490516 SKIV2LQ15477 1246 aaKnown RBP16.93■□□□□ 0.3
EXOSC3-207ENST00000490516 RAB30Q15771 203 aa16.93■□□□□ 0.3
EXOSC3-207ENST00000490516 ZNF365Q70YC5 407 aa16.93■□□□□ 0.3
EXOSC3-207ENST00000490516 RNF180Q86T96 592 aa16.93■□□□□ 0.3
EXOSC3-207ENST00000490516 FOXP4Q8IVH2 680 aaPredicted RBP16.93■□□□□ 0.3
EXOSC3-207ENST00000490516 MAPKAPK5Q8IW41 473 aa16.93■□□□□ 0.3
EXOSC3-207ENST00000490516 TOX2Q96NM4 488 aa16.93■□□□□ 0.3
EXOSC3-207ENST00000490516 SLC28A3Q9HAS3 691 aa16.93■□□□□ 0.3
EXOSC3-207ENST00000490516 RAI14Q9P0K7 980 aa16.93■□□□□ 0.3
EXOSC3-207ENST00000490516 FBXO3Q9UK99 471 aa16.93■□□□□ 0.3
EXOSC3-207ENST00000490516 TBX21Q9UL17 535 aa16.93■□□□□ 0.3
EXOSC3-207ENST00000490516 PALD1Q9ULE6 856 aa16.93■□□□□ 0.3
EXOSC3-207ENST00000490516 PA2G4Q9UQ80 394 aaKnown RBP16.93■□□□□ 0.3
EXOSC3-207ENST00000490516 PRRC2BQ5JSZ5 2229 aaKnown RBP16.92■□□□□ 0.3
EXOSC3-207ENST00000490516 STRNO43815 780 aa16.92■□□□□ 0.3
EXOSC3-207ENST00000490516 RARBP10826 455 aa16.92■□□□□ 0.3
EXOSC3-207ENST00000490516 TGFBRAP1Q8WUH2 860 aa16.92■□□□□ 0.3
EXOSC3-207ENST00000490516 LENG1Q96BZ8 264 aaPredicted RBP16.92■□□□□ 0.3
EXOSC3-207ENST00000490516 HMG20BQ9P0W2 317 aa16.92■□□□□ 0.3
EXOSC3-207ENST00000490516 MYH1P12882 1939 aa16.92■□□□□ 0.3
EXOSC3-207ENST00000490516 A0A0G2JMZ2 1700 aa16.91■□□□□ 0.3
EXOSC3-207ENST00000490516 ERC2O15083 957 aa16.91■□□□□ 0.3
EXOSC3-207ENST00000490516 ERCC3P19447 782 aa16.91■□□□□ 0.3
EXOSC3-207ENST00000490516 IL15P40933 162 aaPredicted RBP16.91■□□□□ 0.3
EXOSC3-207ENST00000490516 WDR63Q8IWG1 891 aa16.91■□□□□ 0.3
EXOSC3-207ENST00000490516 ACER1Q8TDN7 264 aa16.91■□□□□ 0.3
EXOSC3-207ENST00000490516 XAGE2Q96GT9 111 aa16.91■□□□□ 0.3
EXOSC3-207ENST00000490516 MAML3Q96JK9 1138 aa16.91■□□□□ 0.3
EXOSC3-207ENST00000490516 RPAP3Q9H6T3 665 aaPredicted RBP16.91■□□□□ 0.3
EXOSC3-207ENST00000490516 AATFQ9NY61 560 aaKnown RBP eCLIP16.91■□□□□ 0.3
EXOSC3-207ENST00000490516 SAP30BPQ9UHR5 308 aaKnown RBP16.91■□□□□ 0.3
EXOSC3-207ENST00000490516 TRANK1O15050 2925 aa16.91■□□□□ 0.3
EXOSC3-207ENST00000490516 FLT1P17948 1338 aa16.91■□□□□ 0.3
EXOSC3-207ENST00000490516 CCDC174Q6PII3 467 aa16.9■□□□□ 0.3
EXOSC3-207ENST00000490516 STARD7Q9NQZ5 370 aa16.9■□□□□ 0.3
EXOSC3-207ENST00000490516 MYO5AQ9Y4I1 1855 aaKnown RBP16.89■□□□□ 0.29
EXOSC3-207ENST00000490516 A0A1B0GUL7 405 aa16.89■□□□□ 0.29
EXOSC3-207ENST00000490516 TLL1O43897 1013 aa16.89■□□□□ 0.29
EXOSC3-207ENST00000490516 TAL1P17542 331 aaPredicted RBP16.89■□□□□ 0.29
EXOSC3-207ENST00000490516 USP14P54578 494 aa16.89■□□□□ 0.29
EXOSC3-207ENST00000490516 CCDC184Q52MB2 194 aa16.89■□□□□ 0.29
EXOSC3-207ENST00000490516 PSRC1Q6PGN9 363 aaPredicted RBP16.89■□□□□ 0.29
EXOSC3-207ENST00000490516 SPATA5Q8NB90 893 aa16.89■□□□□ 0.29
EXOSC3-207ENST00000490516 HERVK_113Q902F9 699 aa16.89■□□□□ 0.29
EXOSC3-207ENST00000490516 NOL10Q9BSC4 688 aaKnown RBP16.89■□□□□ 0.29
EXOSC3-207ENST00000490516 SPATC1LQ9H0A9 340 aa16.89■□□□□ 0.29
EXOSC3-207ENST00000490516 KIAA1683Q9H0B3 1180 aa16.89■□□□□ 0.29
EXOSC3-207ENST00000490516 SLC5A4Q9NY91 659 aa16.89■□□□□ 0.29
EXOSC3-207ENST00000490516 APBB1O00213 710 aa16.88■□□□□ 0.29
EXOSC3-207ENST00000490516 ACLYP53396 1101 aa16.88■□□□□ 0.29
EXOSC3-207ENST00000490516 RABGGTBP53611 331 aa16.88■□□□□ 0.29
EXOSC3-207ENST00000490516 RAB3GAP1Q15042 981 aa16.88■□□□□ 0.29
EXOSC3-207ENST00000490516 TMEM199Q8N511 208 aa16.88■□□□□ 0.29
EXOSC3-207ENST00000490516 PPP1R12CQ9BZL4 782 aa16.88■□□□□ 0.29
EXOSC3-207ENST00000490516 SMIM22K7EJ46 135 aa16.87■□□□□ 0.29
EXOSC3-207ENST00000490516 ADAMTS4O75173 837 aa16.87■□□□□ 0.29
EXOSC3-207ENST00000490516 MYOGP15173 224 aa16.87■□□□□ 0.29
EXOSC3-207ENST00000490516 MVPQ14764 893 aaKnown RBP16.87■□□□□ 0.29
EXOSC3-207ENST00000490516 SHCBP1Q8NEM2 672 aa16.87■□□□□ 0.29
EXOSC3-207ENST00000490516 COL11A1P12107 1806 aaPredicted RBP16.86■□□□□ 0.29
EXOSC3-207ENST00000490516 RFXAPO00287 272 aa16.86■□□□□ 0.29
EXOSC3-207ENST00000490516 PLS1Q14651 629 aa16.86■□□□□ 0.29
EXOSC3-207ENST00000490516 PPP2R2DQ66LE6 453 aa16.86■□□□□ 0.29
EXOSC3-207ENST00000490516 ADGRA1Q86SQ6 560 aa16.86■□□□□ 0.29
EXOSC3-207ENST00000490516 NCAPG2Q86XI2 1143 aa16.86■□□□□ 0.29
EXOSC3-207ENST00000490516 MRPL50Q8N5N7 158 aaKnown RBP16.86■□□□□ 0.29
EXOSC3-207ENST00000490516 NUP133Q8WUM0 1156 aa16.86■□□□□ 0.29
EXOSC3-207ENST00000490516 TSEN34Q9BSV6 310 aaKnown RBP16.86■□□□□ 0.29
EXOSC3-207ENST00000490516 LRP2BPQ9P2M1 347 aa16.86■□□□□ 0.29
EXOSC3-207ENST00000490516 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.86■□□□□ 0.29
EXOSC3-207ENST00000490516 ZNF521Q96K83 1311 aa16.86■□□□□ 0.29
EXOSC3-207ENST00000490516 PARP14Q460N5 1801 aa16.85■□□□□ 0.29
EXOSC3-207ENST00000490516 PI4K2BG5E9Z4 385 aa16.85■□□□□ 0.29
EXOSC3-207ENST00000490516 BAG3O95817 575 aa16.85■□□□□ 0.29
EXOSC3-207ENST00000490516 HLA-DOAP06340 250 aa16.85■□□□□ 0.29
EXOSC3-207ENST00000490516 TFCP2Q12800 502 aa16.85■□□□□ 0.29
EXOSC3-207ENST00000490516 COG2Q14746 738 aa16.85■□□□□ 0.29
EXOSC3-207ENST00000490516 KCNA10Q16322 511 aa16.85■□□□□ 0.29
EXOSC3-207ENST00000490516 TATDN1Q6P1N9 297 aa16.85■□□□□ 0.29
EXOSC3-207ENST00000490516 ABRAQ8N0Z2 381 aa16.85■□□□□ 0.29
EXOSC3-207ENST00000490516 CDCA7LQ96GN5 454 aa16.85■□□□□ 0.29
EXOSC3-207ENST00000490516 CD320Q9NPF0 282 aa16.85■□□□□ 0.29
EXOSC3-207ENST00000490516 IL23AQ9NPF7 189 aa16.85■□□□□ 0.29
EXOSC3-207ENST00000490516 NRBP1Q9UHY1 535 aa16.85■□□□□ 0.29
EXOSC3-207ENST00000490516 MTCH2Q9Y6C9 303 aa16.85■□□□□ 0.29
EXOSC3-207ENST00000490516 SYNRGQ9UMZ2 1314 aa16.85■□□□□ 0.29
EXOSC3-207ENST00000490516 FGBP02675 491 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms