RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 RAB11FIP3O75154 756 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 MAP4K4O95819 1239 aaPredicted RBP5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 FESP07332 822 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 ZNF16P17020 682 aaPredicted RBP5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 NAP1L1P55209 391 aaKnown RBP5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 CLDN10P78369 228 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 KCNB1Q14721 858 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 NECTIN1Q15223 517 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 ADCK5Q3MIX3 580 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 CFAP100Q494V2 611 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 C1QTNF12Q5T7M4 302 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 RNF187Q5TA31 235 aaPredicted RBP5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 ADALQ6DHV7 355 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 CAPRIN2Q6IMN6 1127 aaKnown RBP5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 NAA16Q6N069 864 aaPredicted RBP5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 PRPF40BQ6NWY9 871 aaKnown RBP5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 CYB5D1Q6P9G0 228 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 MFN1Q8IWA4 741 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 CCDC13Q8IYE1 715 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 FUKQ8N0W3 1084 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 PARD3BQ8TEW8 1205 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 MRPS27Q92552 414 aaKnown RBP5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 CCDC47Q96A33 483 aaKnown RBP5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 ZBTB10Q96DT7 871 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 OSBPL9Q96SU4 736 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 NAA15Q9BXJ9 866 aaKnown RBP5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 CENPHQ9H3R5 247 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 MYO1AQ9UBC5 1043 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 NEURL4Q96JN8 1562 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 FRMD3A2A2Y4 597 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 GOLGA6BA6NDN3 693 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 PPFIA3O75145 1194 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 CDKL5O76039 1030 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 F12P00748 615 aaPredicted RBP5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 SLC3A2P08195 630 aaKnown RBP5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 IMPDH2P12268 514 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 ATP2B4P23634 1241 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 DPYDQ12882 1025 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 SNX1Q13596 522 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 KARSQ15046 597 aaKnown RBP5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 SETDB1Q15047 1291 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 ZNF569Q5MCW4 686 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 EMC10Q5UCC4 262 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 CCNI2Q6ZMN8 369 aaPredicted RBP5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 FAM228AQ86W67 206 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 PDILTQ8N807 584 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 TC2NQ8N9U0 490 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 C3orf20Q8ND61 904 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 TRIM58Q8NG06 486 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 SMARCC2Q8TAQ2 1214 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 BRF1Q92994 677 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 RPGRIP1Q96KN7 1286 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 CCDC114Q96M63 670 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 FMNL2Q96PY5 1086 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 PANX2Q96RD6 677 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 NAPGQ99747 312 aaPredicted RBP5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 EPN3Q9H201 632 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 HSD3B7Q9H2F3 369 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 BIN2Q9UBW5 565 aaPredicted RBP5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 KIAA1024Q9UPX6 916 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 SPG7Q9UQ90 795 aa5.36□□□□□ -1.55
SNRNP40-206ENST00000489853 H7C1W4 665 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 BIN1O00499 593 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 LCE2BO14633 110 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 MAFGO15525 162 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 MGRN1O60291 552 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 PRMT3O60678 531 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 DTNBO60941 627 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 SKAP2O75563 359 aaPredicted RBP5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 PDHBP11177 359 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 ATP1A3P13637 1013 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 ME1P48163 572 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 HDGFP51858 240 aaKnown RBP5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 MYL5Q02045 173 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 PTH1RQ03431 593 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 MTX1Q13505 466 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 NBPF14Q5TI25 921 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 ALS2CLQ60I27 953 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 CWF19L1Q69YN2 538 aaKnown RBP5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 MIS18BP1Q6P0N0 1132 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 BLOC1S2Q6QNY1 142 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 C6orf89Q6UWU4 347 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 CCDC121Q6ZUS5 278 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 RBM12BQ8IXT5 1001 aaKnown RBP5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 PI4K2BQ8TCG2 481 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 GIPC2Q8TF65 315 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 DPF2Q92785 391 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 PHACTR3Q96KR7 559 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 SPAG5Q96R06 1193 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 EHD4Q9H223 541 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 MRPL44Q9H9J2 332 aaKnown RBP5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 EBF2Q9HAK2 575 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 FANCLQ9NW38 375 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 RGL1Q9NZL6 768 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 CEP126Q9P2H0 1117 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 TPX2Q9ULW0 747 aaKnown RBP5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 PLCH2O75038 1416 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 KDRP35968 1356 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 TRPM2O94759 1503 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 ZC3H13Q5T200 1668 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms