RNA–Protein interactions for RNA: ENST00000489836.1

AC055748.1-201, humanhuman

BASIC

Gene AC055748.1, Length 959 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055748.1-201ENST00000489836 SRGAP3O43295 1099 aa12.36□□□□□ -0.43
AC055748.1-201ENST00000489836 SLURP2P0DP57 97 aa12.36□□□□□ -0.43
AC055748.1-201ENST00000489836 IL15P40933 162 aaPredicted RBP12.36□□□□□ -0.43
AC055748.1-201ENST00000489836 PUM3Q15397 648 aaKnown RBP12.36□□□□□ -0.43
AC055748.1-201ENST00000489836 FOXR1Q6PIV2 292 aa12.36□□□□□ -0.43
AC055748.1-201ENST00000489836 PLEKHM2Q8IWE5 1019 aa12.36□□□□□ -0.43
AC055748.1-201ENST00000489836 CERS5Q8N5B7 392 aa12.36□□□□□ -0.43
AC055748.1-201ENST00000489836 PANK1Q8TE04 598 aa12.36□□□□□ -0.43
AC055748.1-201ENST00000489836 LPIN2Q92539 896 aa12.36□□□□□ -0.43
AC055748.1-201ENST00000489836 TMEM88BA6NKF7 163 aa12.35□□□□□ -0.43
AC055748.1-201ENST00000489836 CLDN10P78369 228 aa12.35□□□□□ -0.43
AC055748.1-201ENST00000489836 ATP8B2P98198 1209 aa12.35□□□□□ -0.43
AC055748.1-201ENST00000489836 FMR1Q06787 632 aaKnown RBP eCLIP12.35□□□□□ -0.43
AC055748.1-201ENST00000489836 CDC37L1Q7L3B6 337 aa12.35□□□□□ -0.43
AC055748.1-201ENST00000489836 ITPRIPQ8IWB1 547 aa12.35□□□□□ -0.43
AC055748.1-201ENST00000489836 SSH3Q8TE77 659 aa12.35□□□□□ -0.43
AC055748.1-201ENST00000489836 KLRG1Q96E93 195 aa12.35□□□□□ -0.43
AC055748.1-201ENST00000489836 ZBED3Q96IU2 234 aaPredicted RBP12.35□□□□□ -0.43
AC055748.1-201ENST00000489836 SIL1Q9H173 461 aa12.35□□□□□ -0.43
AC055748.1-201ENST00000489836 MYOZ2Q9NPC6 264 aa12.35□□□□□ -0.43
AC055748.1-201ENST00000489836 IQSEC3Q9UPP2 1182 aaPredicted RBP12.35□□□□□ -0.43
AC055748.1-201ENST00000489836 TRAF5O00463 557 aa12.34□□□□□ -0.43
AC055748.1-201ENST00000489836 IFIT1P09914 478 aaKnown RBP12.34□□□□□ -0.43
AC055748.1-201ENST00000489836 MTFR1Q15390 333 aa12.34□□□□□ -0.43
AC055748.1-201ENST00000489836 CAVIN4Q5BKX8 364 aa12.34□□□□□ -0.43
AC055748.1-201ENST00000489836 CST9Q5W186 159 aa12.34□□□□□ -0.43
AC055748.1-201ENST00000489836 ZNF295-AS1Q8N0V1 137 aa12.34□□□□□ -0.43
AC055748.1-201ENST00000489836 GLIS2Q9BZE0 524 aaPredicted RBP12.34□□□□□ -0.43
AC055748.1-201ENST00000489836 CEP350Q5VT06 3117 aa12.34□□□□□ -0.43
AC055748.1-201ENST00000489836 WNT10BO00744 389 aa12.33□□□□□ -0.44
AC055748.1-201ENST00000489836 SLC5A1P13866 664 aa12.33□□□□□ -0.44
AC055748.1-201ENST00000489836 SRSF11Q05519 484 aaKnown RBP12.33□□□□□ -0.44
AC055748.1-201ENST00000489836 KIAA0825Q8IV33 1275 aa12.33□□□□□ -0.44
AC055748.1-201ENST00000489836 SVOPQ8N4V2 548 aa12.33□□□□□ -0.44
AC055748.1-201ENST00000489836 OGFOD1Q8N543 542 aa12.33□□□□□ -0.44
AC055748.1-201ENST00000489836 JMYQ8N9B5 988 aa12.33□□□□□ -0.44
AC055748.1-201ENST00000489836 AIDAQ96BJ3 306 aa12.33□□□□□ -0.44
AC055748.1-201ENST00000489836 TRERF1Q96PN7 1200 aa12.33□□□□□ -0.44
AC055748.1-201ENST00000489836 NIFKQ9BYG3 293 aaKnown RBP12.33□□□□□ -0.44
AC055748.1-201ENST00000489836 TFIP11Q9UBB9 837 aaKnown RBP12.33□□□□□ -0.44
AC055748.1-201ENST00000489836 HDAC9Q9UKV0 1011 aa12.33□□□□□ -0.44
AC055748.1-201ENST00000489836 ASTN2O75129 1339 aaPredicted RBP12.33□□□□□ -0.44
AC055748.1-201ENST00000489836 PITPNM2Q9BZ72 1349 aa12.33□□□□□ -0.44
AC055748.1-201ENST00000489836 UBAP2LQ14157 1087 aaKnown RBP12.32□□□□□ -0.44
AC055748.1-201ENST00000489836 PDE3AQ14432 1141 aa12.32□□□□□ -0.44
AC055748.1-201ENST00000489836 MVPQ14764 893 aaKnown RBP12.32□□□□□ -0.44
AC055748.1-201ENST00000489836 ATP2B3Q16720 1220 aa12.32□□□□□ -0.44
AC055748.1-201ENST00000489836 NBPF9Q3BBW0 867 aa12.32□□□□□ -0.44
AC055748.1-201ENST00000489836 LYPD4Q6UWN0 246 aa12.32□□□□□ -0.44
AC055748.1-201ENST00000489836 USP48Q86UV5 1035 aa12.32□□□□□ -0.44
AC055748.1-201ENST00000489836 TRIM50Q86XT4 487 aa12.32□□□□□ -0.44
AC055748.1-201ENST00000489836 TPCN2Q8NHX9 752 aa12.32□□□□□ -0.44
AC055748.1-201ENST00000489836 DCPSQ96C86 337 aaKnown RBP12.32□□□□□ -0.44
AC055748.1-201ENST00000489836 CALR3Q96L12 384 aaKnown RBP12.32□□□□□ -0.44
AC055748.1-201ENST00000489836 GGA3Q9NZ52 723 aa12.32□□□□□ -0.44
AC055748.1-201ENST00000489836 MKRN1Q9UHC7 482 aaKnown RBP12.32□□□□□ -0.44
AC055748.1-201ENST00000489836 NOP58Q9Y2X3 529 aaKnown RBP12.32□□□□□ -0.44
AC055748.1-201ENST00000489836 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.32□□□□□ -0.44
AC055748.1-201ENST00000489836 RASSF10A6NK89 507 aa12.31□□□□□ -0.44
AC055748.1-201ENST00000489836 CDK2AP1O14519 115 aa12.31□□□□□ -0.44
AC055748.1-201ENST00000489836 TFCP2Q12800 502 aa12.31□□□□□ -0.44
AC055748.1-201ENST00000489836 CEP85Q6P2H3 762 aa12.31□□□□□ -0.44
AC055748.1-201ENST00000489836 KRT26Q7Z3Y9 468 aa12.31□□□□□ -0.44
AC055748.1-201ENST00000489836 VPS37DQ86XT2 251 aa12.31□□□□□ -0.44
AC055748.1-201ENST00000489836 PGBD3Q8N328 593 aa12.31□□□□□ -0.44
AC055748.1-201ENST00000489836 C1orf115Q9H7X2 142 aa12.31□□□□□ -0.44
AC055748.1-201ENST00000489836 ZBTB40Q9NUA8 1239 aa12.31□□□□□ -0.44
AC055748.1-201ENST00000489836 DDX19BQ9UMR2 479 aa12.31□□□□□ -0.44
AC055748.1-201ENST00000489836 JAG2Q9Y219 1238 aa12.31□□□□□ -0.44
AC055748.1-201ENST00000489836 CNTNAP1P78357 1384 aa12.3□□□□□ -0.44
AC055748.1-201ENST00000489836 BACH1O14867 736 aa12.3□□□□□ -0.44
AC055748.1-201ENST00000489836 ATP4AP20648 1035 aa12.3□□□□□ -0.44
AC055748.1-201ENST00000489836 TIMM10P62072 90 aa12.3□□□□□ -0.44
AC055748.1-201ENST00000489836 G3BP1Q13283 466 aaKnown RBP eCLIP12.3□□□□□ -0.44
AC055748.1-201ENST00000489836 TBCELQ5QJ74 424 aa12.3□□□□□ -0.44
AC055748.1-201ENST00000489836 MFSD14BQ5SR56 506 aa12.3□□□□□ -0.44
AC055748.1-201ENST00000489836 ANGEL2Q5VTE6 544 aaKnown RBP12.3□□□□□ -0.44
AC055748.1-201ENST00000489836 DLK2Q6UY11 383 aa12.3□□□□□ -0.44
AC055748.1-201ENST00000489836 TNS4Q8IZW8 715 aa12.3□□□□□ -0.44
AC055748.1-201ENST00000489836 AKAP2Q9Y2D5 859 aa12.3□□□□□ -0.44
AC055748.1-201ENST00000489836 A0A1B0GUL7 405 aa12.29□□□□□ -0.44
AC055748.1-201ENST00000489836 ADM5C9JUS6 153 aa12.29□□□□□ -0.44
AC055748.1-201ENST00000489836 CELF2O95319 508 aaKnown RBP12.29□□□□□ -0.44
AC055748.1-201ENST00000489836 ADORA1P30542 326 aa12.29□□□□□ -0.44
AC055748.1-201ENST00000489836 PHKA1P46020 1223 aa12.29□□□□□ -0.44
AC055748.1-201ENST00000489836 GRIK5Q16478 980 aa12.29□□□□□ -0.44
AC055748.1-201ENST00000489836 C20orf194Q5TEA3 1177 aa12.29□□□□□ -0.44
AC055748.1-201ENST00000489836 CCDC102BQ68D86 513 aa12.29□□□□□ -0.44
AC055748.1-201ENST00000489836 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.29□□□□□ -0.44
AC055748.1-201ENST00000489836 TBC1D22AQ8WUA7 517 aa12.29□□□□□ -0.44
AC055748.1-201ENST00000489836 MRIQ9BWK5 157 aa12.29□□□□□ -0.44
AC055748.1-201ENST00000489836 GPR108Q9NPR9 543 aa12.29□□□□□ -0.44
AC055748.1-201ENST00000489836 DNAAF2Q9NVR5 837 aaKnown RBP12.29□□□□□ -0.44
AC055748.1-201ENST00000489836 SERPINA10Q9UK55 444 aa12.29□□□□□ -0.44
AC055748.1-201ENST00000489836 SUGT1Q9Y2Z0 365 aa12.29□□□□□ -0.44
AC055748.1-201ENST00000489836 MAFBQ9Y5Q3 323 aaPredicted RBP12.29□□□□□ -0.44
AC055748.1-201ENST00000489836 PALM3A6NDB9 673 aaPredicted RBP12.28□□□□□ -0.44
AC055748.1-201ENST00000489836 ATP1A2P50993 1020 aa12.28□□□□□ -0.44
AC055748.1-201ENST00000489836 EPHA4P54764 986 aa12.28□□□□□ -0.44
AC055748.1-201ENST00000489836 HDLBPQ00341 1268 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms