RNA–Protein interactions for RNA: ENST00000489661.5

PRDM15-213, Transcript of PR/SET domain 15, humanhuman

TSL 3

Gene PRDM15, Length 856 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-213ENST00000489661 ROBO3Q96MS0 1386 aa17.2■□□□□ 0.34
PRDM15-213ENST00000489661 A0A1W2PRG0 241 aa17.2■□□□□ 0.34
PRDM15-213ENST00000489661 EEF2P13639 858 aaKnown RBP17.2■□□□□ 0.34
PRDM15-213ENST00000489661 COG2Q14746 738 aa17.2■□□□□ 0.34
PRDM15-213ENST00000489661 SAMD1Q6SPF0 538 aaPredicted RBP17.2■□□□□ 0.34
PRDM15-213ENST00000489661 SPICE1Q8N0Z3 855 aa17.2■□□□□ 0.34
PRDM15-213ENST00000489661 RNF208Q9H0X6 261 aa17.2■□□□□ 0.34
PRDM15-213ENST00000489661 VCPKMTQ9H867 229 aa17.2■□□□□ 0.34
PRDM15-213ENST00000489661 EPB41L4AQ9HCS5 686 aaPredicted RBP17.2■□□□□ 0.34
PRDM15-213ENST00000489661 TXNRD2Q9NNW7 524 aa17.2■□□□□ 0.34
PRDM15-213ENST00000489661 RBPJLQ9UBG7 517 aa17.2■□□□□ 0.34
PRDM15-213ENST00000489661 KIAA0100Q14667 2235 aaKnown RBP17.2■□□□□ 0.34
PRDM15-213ENST00000489661 SMIM22K7EJ46 135 aa17.19■□□□□ 0.34
PRDM15-213ENST00000489661 FLOT1O75955 427 aa17.19■□□□□ 0.34
PRDM15-213ENST00000489661 CCL5P13501 91 aa17.19■□□□□ 0.34
PRDM15-213ENST00000489661 ELNP15502 786 aa17.19■□□□□ 0.34
PRDM15-213ENST00000489661 EN2P19622 333 aaPredicted RBP17.19■□□□□ 0.34
PRDM15-213ENST00000489661 MFAP1P55081 439 aaKnown RBP17.19■□□□□ 0.34
PRDM15-213ENST00000489661 MCMDC2Q4G0Z9 681 aa17.19■□□□□ 0.34
PRDM15-213ENST00000489661 CCDC129Q6ZRS4 1044 aa17.19■□□□□ 0.34
PRDM15-213ENST00000489661 PLEKHH3Q7Z736 793 aa17.19■□□□□ 0.34
PRDM15-213ENST00000489661 CLEC10AQ8IUN9 316 aa17.19■□□□□ 0.34
PRDM15-213ENST00000489661 IVNS1ABPQ9Y6Y0 642 aa17.19■□□□□ 0.34
PRDM15-213ENST00000489661 WDR46O15213 610 aaKnown RBP17.18■□□□□ 0.34
PRDM15-213ENST00000489661 PRDM1O75626 825 aa17.18■□□□□ 0.34
PRDM15-213ENST00000489661 INHAP05111 366 aa17.18■□□□□ 0.34
PRDM15-213ENST00000489661 TSPY3P0CV98 308 aa17.18■□□□□ 0.34
PRDM15-213ENST00000489661 TSPY8P0CW00 308 aa17.18■□□□□ 0.34
PRDM15-213ENST00000489661 RASA1P20936 1047 aa17.18■□□□□ 0.34
PRDM15-213ENST00000489661 PPARAQ07869 468 aa17.18■□□□□ 0.34
PRDM15-213ENST00000489661 MTFR1Q15390 333 aa17.18■□□□□ 0.34
PRDM15-213ENST00000489661 PPP4R3BQ5MIZ7 849 aa17.18■□□□□ 0.34
PRDM15-213ENST00000489661 LBX2Q6XYB7 198 aa17.18■□□□□ 0.34
PRDM15-213ENST00000489661 TRMT44Q8IYL2 757 aaKnown RBP17.18■□□□□ 0.34
PRDM15-213ENST00000489661 MB21D1Q8N884 522 aa17.18■□□□□ 0.34
PRDM15-213ENST00000489661 SPDYE16A6NNV3 312 aaPredicted RBP17.17■□□□□ 0.34
PRDM15-213ENST00000489661 HIP1O00291 1037 aa17.17■□□□□ 0.34
PRDM15-213ENST00000489661 PEX10O60683 326 aa17.17■□□□□ 0.34
PRDM15-213ENST00000489661 HMGCRP04035 888 aa17.17■□□□□ 0.34
PRDM15-213ENST00000489661 RGS2P41220 211 aa17.17■□□□□ 0.34
PRDM15-213ENST00000489661 PLS1Q14651 629 aa17.17■□□□□ 0.34
PRDM15-213ENST00000489661 GPR142Q7Z601 462 aa17.17■□□□□ 0.34
PRDM15-213ENST00000489661 PLEKHM2Q8IWE5 1019 aa17.17■□□□□ 0.34
PRDM15-213ENST00000489661 DIAPH3Q9NSV4 1193 aa17.17■□□□□ 0.34
PRDM15-213ENST00000489661 CYP2B6P20813 491 aa17.16■□□□□ 0.34
PRDM15-213ENST00000489661 Q3C1V9 767 aa17.16■□□□□ 0.34
PRDM15-213ENST00000489661 FAM227BQ96M60 508 aa17.16■□□□□ 0.34
PRDM15-213ENST00000489661 PORCNQ9H237 461 aa17.16■□□□□ 0.34
PRDM15-213ENST00000489661 OSBPL3Q9H4L5 887 aa17.16■□□□□ 0.34
PRDM15-213ENST00000489661 NYAP2Q9P242 653 aa17.16■□□□□ 0.34
PRDM15-213ENST00000489661 CLIP2Q9UDT6 1046 aa17.16■□□□□ 0.34
PRDM15-213ENST00000489661 CTDP1Q9Y5B0 961 aaPredicted RBP17.16■□□□□ 0.34
PRDM15-213ENST00000489661 TTLL1O95922 423 aa17.15■□□□□ 0.34
PRDM15-213ENST00000489661 GJB1P08034 283 aa17.15■□□□□ 0.34
PRDM15-213ENST00000489661 ZKSCAN1P17029 563 aaPredicted RBP17.15■□□□□ 0.34
PRDM15-213ENST00000489661 DSG3P32926 999 aa17.15■□□□□ 0.34
PRDM15-213ENST00000489661 NMIQ13287 307 aaPredicted RBP17.15■□□□□ 0.34
PRDM15-213ENST00000489661 SIAH1Q8IUQ4 282 aa17.15■□□□□ 0.34
PRDM15-213ENST00000489661 UNC93B1Q9H1C4 597 aa17.15■□□□□ 0.34
PRDM15-213ENST00000489661 GJD2Q9UKL4 321 aa17.15■□□□□ 0.34
PRDM15-213ENST00000489661 ISY1Q9ULR0 285 aaKnown RBP17.15■□□□□ 0.34
PRDM15-213ENST00000489661 RBBP6Q7Z6E9 1792 aaKnown RBP17.15■□□□□ 0.34
PRDM15-213ENST00000489661 TNRC18O15417 2968 aaPredicted RBP17.14■□□□□ 0.33
PRDM15-213ENST00000489661 A0A0D9SFI3 127 aa17.14■□□□□ 0.33
PRDM15-213ENST00000489661 TSPY2A6NKD2 308 aa17.14■□□□□ 0.33
PRDM15-213ENST00000489661 CNMDO75829 334 aa17.14■□□□□ 0.33
PRDM15-213ENST00000489661 XRCC5P13010 732 aaKnown RBP17.14■□□□□ 0.33
PRDM15-213ENST00000489661 CAPN2P17655 700 aa17.14■□□□□ 0.33
PRDM15-213ENST00000489661 TFAP4Q01664 338 aa17.14■□□□□ 0.33
PRDM15-213ENST00000489661 TOMM22Q9NS69 142 aa17.14■□□□□ 0.33
PRDM15-213ENST00000489661 BTBD7Q9P203 1132 aa17.14■□□□□ 0.33
PRDM15-213ENST00000489661 BRCA2P51587 3418 aa17.14■□□□□ 0.33
PRDM15-213ENST00000489661 CCDC171Q6TFL3 1326 aa17.14■□□□□ 0.33
PRDM15-213ENST00000489661 SLC15A5A6NIM6 579 aa17.13■□□□□ 0.33
PRDM15-213ENST00000489661 TFRCP02786 760 aaKnown RBP17.13■□□□□ 0.33
PRDM15-213ENST00000489661 SDSP20132 328 aa17.13■□□□□ 0.33
PRDM15-213ENST00000489661 GJA8P48165 433 aa17.13■□□□□ 0.33
PRDM15-213ENST00000489661 ALX1Q15699 326 aa17.13■□□□□ 0.33
PRDM15-213ENST00000489661 FAM47AQ5JRC9 791 aa17.13■□□□□ 0.33
PRDM15-213ENST00000489661 KIAA1755Q5JYT7 1200 aa17.13■□□□□ 0.33
PRDM15-213ENST00000489661 FAM83BQ5T0W9 1011 aa17.13■□□□□ 0.33
PRDM15-213ENST00000489661 CEP95Q96GE4 821 aa17.13■□□□□ 0.33
PRDM15-213ENST00000489661 APBA2Q99767 749 aa17.13■□□□□ 0.33
PRDM15-213ENST00000489661 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.13■□□□□ 0.33
PRDM15-213ENST00000489661 SPATC1LQ9H0A9 340 aa17.13■□□□□ 0.33
PRDM15-213ENST00000489661 HMX1Q9NP08 348 aaPredicted RBP17.13■□□□□ 0.33
PRDM15-213ENST00000489661 SLC5A4Q9NY91 659 aa17.13■□□□□ 0.33
PRDM15-213ENST00000489661 PDE4DIPQ5VU43 2346 aa17.13■□□□□ 0.33
PRDM15-213ENST00000489661 DOCK3Q8IZD9 2030 aa17.13■□□□□ 0.33
PRDM15-213ENST00000489661 F5H6K3 240 aa17.12■□□□□ 0.33
PRDM15-213ENST00000489661 RANBP6O60518 1105 aaKnown RBP17.12■□□□□ 0.33
PRDM15-213ENST00000489661 CTDSPL2Q05D32 466 aa17.12■□□□□ 0.33
PRDM15-213ENST00000489661 KLRC3Q07444 240 aa17.12■□□□□ 0.33
PRDM15-213ENST00000489661 MAP2K5Q13163 448 aa17.12■□□□□ 0.33
PRDM15-213ENST00000489661 MORN1Q5T089 497 aa17.12■□□□□ 0.33
PRDM15-213ENST00000489661 VPS53Q5VIR6 699 aa17.12■□□□□ 0.33
PRDM15-213ENST00000489661 DPP9Q86TI2 863 aa17.12■□□□□ 0.33
PRDM15-213ENST00000489661 NCAPG2Q86XI2 1143 aa17.12■□□□□ 0.33
PRDM15-213ENST00000489661 NEDD1Q8NHV4 660 aa17.12■□□□□ 0.33
PRDM15-213ENST00000489661 U2AF1L4Q8WU68 220 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms