RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 LARP1BQ659C4 914 aaKnown RBP16.48■□□□□ 0.23
VPS26A-205ENST00000489656 DCAF15Q66K64 600 aa16.48■□□□□ 0.23
VPS26A-205ENST00000489656 TMTC3Q6ZXV5 915 aa16.48■□□□□ 0.23
VPS26A-205ENST00000489656 FAM184AQ8NB25 1140 aa16.48■□□□□ 0.23
VPS26A-205ENST00000489656 SSC5DA1L4H1 1573 aa16.47■□□□□ 0.23
VPS26A-205ENST00000489656 PTPRFP10586 1907 aa16.47■□□□□ 0.23
VPS26A-205ENST00000489656 PHF20L1A8MW92 1017 aa16.47■□□□□ 0.23
VPS26A-205ENST00000489656 GDF11O95390 407 aa16.47■□□□□ 0.23
VPS26A-205ENST00000489656 SNHG28P0DPA3 235 aa16.47■□□□□ 0.23
VPS26A-205ENST00000489656 CAP2P40123 477 aa16.47■□□□□ 0.23
VPS26A-205ENST00000489656 GNAQP50148 359 aa16.47■□□□□ 0.23
VPS26A-205ENST00000489656 FUT2Q10981 343 aa16.47■□□□□ 0.23
VPS26A-205ENST00000489656 PKP1Q13835 747 aa16.47■□□□□ 0.23
VPS26A-205ENST00000489656 SEPT2Q15019 361 aa16.47■□□□□ 0.23
VPS26A-205ENST00000489656 NBPF11Q86T75 865 aa16.47■□□□□ 0.23
VPS26A-205ENST00000489656 DDX11Q96FC9 970 aa16.47■□□□□ 0.23
VPS26A-205ENST00000489656 RNF26Q9BY78 433 aaPredicted RBP16.47■□□□□ 0.23
VPS26A-205ENST00000489656 ORC3Q9UBD5 711 aaPredicted RBP16.47■□□□□ 0.23
VPS26A-205ENST00000489656 ZBTB21Q9ULJ3 1066 aa16.47■□□□□ 0.23
VPS26A-205ENST00000489656 MTMR6Q9Y217 621 aa16.47■□□□□ 0.23
VPS26A-205ENST00000489656 PALM3A6NDB9 673 aaPredicted RBP16.46■□□□□ 0.23
VPS26A-205ENST00000489656 GH2P01242 217 aa16.46■□□□□ 0.23
VPS26A-205ENST00000489656 JAG1P78504 1218 aa16.46■□□□□ 0.23
VPS26A-205ENST00000489656 ICA1Q05084 483 aa16.46■□□□□ 0.23
VPS26A-205ENST00000489656 SSRP1Q08945 709 aaKnown RBP16.46■□□□□ 0.23
VPS26A-205ENST00000489656 SHROOM1Q2M3G4 852 aaPredicted RBP16.46■□□□□ 0.23
VPS26A-205ENST00000489656 NBPF12Q5TAG4 269 aaPredicted RBP16.46■□□□□ 0.23
VPS26A-205ENST00000489656 CLEC17AQ6ZS10 378 aa16.46■□□□□ 0.23
VPS26A-205ENST00000489656 MIGA2Q7L4E1 593 aa16.46■□□□□ 0.23
VPS26A-205ENST00000489656 TRIM22Q8IYM9 498 aa16.46■□□□□ 0.23
VPS26A-205ENST00000489656 DCPSQ96C86 337 aaKnown RBP16.46■□□□□ 0.23
VPS26A-205ENST00000489656 LZTS2Q9BRK4 669 aa16.46■□□□□ 0.23
VPS26A-205ENST00000489656 ZNF341Q9BYN7 854 aa16.46■□□□□ 0.23
VPS26A-205ENST00000489656 TAF1DQ9H5J8 278 aaPredicted RBP16.46■□□□□ 0.23
VPS26A-205ENST00000489656 CLIP2Q9UDT6 1046 aa16.46■□□□□ 0.23
VPS26A-205ENST00000489656 MAD2L2Q9UI95 211 aa16.46■□□□□ 0.23
VPS26A-205ENST00000489656 ZNF112Q9UJU3 913 aa16.46■□□□□ 0.23
VPS26A-205ENST00000489656 SCAF8Q9UPN6 1271 aaKnown RBP16.46■□□□□ 0.23
VPS26A-205ENST00000489656 PARP14Q460N5 1801 aa16.46■□□□□ 0.23
VPS26A-205ENST00000489656 CNTNAP5Q8WYK1 1306 aa16.45■□□□□ 0.22
VPS26A-205ENST00000489656 POTECB2RU33 542 aa16.45■□□□□ 0.22
VPS26A-205ENST00000489656 ASNSP08243 561 aa16.45■□□□□ 0.22
VPS26A-205ENST00000489656 ZSCAN22P10073 491 aaPredicted RBP16.45■□□□□ 0.22
VPS26A-205ENST00000489656 PDHBP11177 359 aa16.45■□□□□ 0.22
VPS26A-205ENST00000489656 EEF2P13639 858 aaKnown RBP16.45■□□□□ 0.22
VPS26A-205ENST00000489656 SMARCA1P28370 1054 aa16.45■□□□□ 0.22
VPS26A-205ENST00000489656 SUPT20HL1Q3ZLR7 823 aa16.45■□□□□ 0.22
VPS26A-205ENST00000489656 PNMA8AQ86V59 439 aaPredicted RBP16.45■□□□□ 0.22
VPS26A-205ENST00000489656 CLEC10AQ8IUN9 316 aa16.45■□□□□ 0.22
VPS26A-205ENST00000489656 SIAH1Q8IUQ4 282 aa16.45■□□□□ 0.22
VPS26A-205ENST00000489656 WASF1Q92558 559 aa16.45■□□□□ 0.22
VPS26A-205ENST00000489656 TNPO1Q92973 898 aaKnown RBP16.45■□□□□ 0.22
VPS26A-205ENST00000489656 PHKBQ93100 1093 aa16.45■□□□□ 0.22
VPS26A-205ENST00000489656 RBM27Q9P2N5 1060 aaKnown RBP16.45■□□□□ 0.22
VPS26A-205ENST00000489656 PRPF3O43395 683 aaKnown RBP16.44■□□□□ 0.22
VPS26A-205ENST00000489656 CTNND1O60716 968 aaKnown RBP16.44■□□□□ 0.22
VPS26A-205ENST00000489656 DTNBO60941 627 aa16.44■□□□□ 0.22
VPS26A-205ENST00000489656 PLEKHA8P1O95397 391 aa16.44■□□□□ 0.22
VPS26A-205ENST00000489656 DEXIO95424 95 aa16.44■□□□□ 0.22
VPS26A-205ENST00000489656 PARP1P09874 1014 aaKnown RBP16.44■□□□□ 0.22
VPS26A-205ENST00000489656 ASPRV1Q53RT3 343 aa16.44■□□□□ 0.22
VPS26A-205ENST00000489656 LRRC47Q8N1G4 583 aaKnown RBP16.44■□□□□ 0.22
VPS26A-205ENST00000489656 GMCL1P1Q8NEA9 526 aa16.44■□□□□ 0.22
VPS26A-205ENST00000489656 SLC26A6Q9BXS9 759 aa16.44■□□□□ 0.22
VPS26A-205ENST00000489656 SULF1Q8IWU6 871 aa16.43■□□□□ 0.22
VPS26A-205ENST00000489656 SRBD1Q8N5C6 995 aaKnown RBP16.43■□□□□ 0.22
VPS26A-205ENST00000489656 DCAF4Q8WV16 495 aa16.43■□□□□ 0.22
VPS26A-205ENST00000489656 SPZ1Q9BXG8 430 aa16.43■□□□□ 0.22
VPS26A-205ENST00000489656 ARHGEF10LQ9HCE6 1279 aa16.43■□□□□ 0.22
VPS26A-205ENST00000489656 TRPM7Q96QT4 1865 aa16.43■□□□□ 0.22
VPS26A-205ENST00000489656 USP17L5A8MUK1 530 aa16.42■□□□□ 0.22
VPS26A-205ENST00000489656 F13A1P00488 732 aa16.42■□□□□ 0.22
VPS26A-205ENST00000489656 GPATCH4Q5T3I0 446 aaKnown RBP16.42■□□□□ 0.22
VPS26A-205ENST00000489656 STAG2Q8N3U4 1231 aa16.42■□□□□ 0.22
VPS26A-205ENST00000489656 FBXO18Q8NFZ0 1043 aa16.42■□□□□ 0.22
VPS26A-205ENST00000489656 C8orf76Q96K31 380 aa16.42■□□□□ 0.22
VPS26A-205ENST00000489656 ALG1Q9BT22 464 aa16.42■□□□□ 0.22
VPS26A-205ENST00000489656 VPS37CA5D8V6 355 aaPredicted RBP16.41■□□□□ 0.22
VPS26A-205ENST00000489656 KLRF2D3W0D1 207 aa16.41■□□□□ 0.22
VPS26A-205ENST00000489656 H3BQV1 296 aa16.41■□□□□ 0.22
VPS26A-205ENST00000489656 ATP2B2Q01814 1243 aa16.41■□□□□ 0.22
VPS26A-205ENST00000489656 AKAP17AQ02040 695 aaKnown RBP16.41■□□□□ 0.22
VPS26A-205ENST00000489656 ZNF543Q08ER8 600 aa16.41■□□□□ 0.22
VPS26A-205ENST00000489656 IFFO2Q5TF58 517 aa16.41■□□□□ 0.22
VPS26A-205ENST00000489656 USP17L2Q6R6M4 530 aa16.41■□□□□ 0.22
VPS26A-205ENST00000489656 CDC37L1Q7L3B6 337 aa16.41■□□□□ 0.22
VPS26A-205ENST00000489656 KRT26Q7Z3Y9 468 aa16.41■□□□□ 0.22
VPS26A-205ENST00000489656 CMTR1Q8N1G2 835 aaKnown RBP16.41■□□□□ 0.22
VPS26A-205ENST00000489656 KLRG1Q96E93 195 aa16.41■□□□□ 0.22
VPS26A-205ENST00000489656 GMCL1Q96IK5 515 aa16.41■□□□□ 0.22
VPS26A-205ENST00000489656 SH2D4AQ9H788 454 aa16.41■□□□□ 0.22
VPS26A-205ENST00000489656 TMX2Q9Y320 296 aa16.41■□□□□ 0.22
VPS26A-205ENST00000489656 A0A1W2PRG0 241 aa16.4■□□□□ 0.22
VPS26A-205ENST00000489656 PPFIA3O75145 1194 aa16.4■□□□□ 0.22
VPS26A-205ENST00000489656 PKN1Q16512 942 aa16.4■□□□□ 0.22
VPS26A-205ENST00000489656 NOL9Q5SY16 702 aaKnown RBP16.4■□□□□ 0.22
VPS26A-205ENST00000489656 USP48Q86UV5 1035 aa16.4■□□□□ 0.22
VPS26A-205ENST00000489656 FAM177A1Q8N128 213 aaPredicted RBP16.4■□□□□ 0.22
VPS26A-205ENST00000489656 GBP4Q96PP9 640 aa16.4■□□□□ 0.22
VPS26A-205ENST00000489656 RIOX1Q9H6W3 641 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms