RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 ZBTB1Q9Y2K1 713 aa9.62□□□□□ -0.87
SMC6-209ENST00000489535 IBTKQ9P2D0 1353 aaPredicted RBP9.62□□□□□ -0.87
SMC6-209ENST00000489535 TAF1P21675 1872 aa9.62□□□□□ -0.87
SMC6-209ENST00000489535 DKK1O94907 266 aa9.61□□□□□ -0.87
SMC6-209ENST00000489535 GLB1P16278 677 aa9.61□□□□□ -0.87
SMC6-209ENST00000489535 INPP5BP32019 993 aa9.61□□□□□ -0.87
SMC6-209ENST00000489535 RBM6P78332 1123 aaKnown RBP9.61□□□□□ -0.87
SMC6-209ENST00000489535 JAG1P78504 1218 aa9.61□□□□□ -0.87
SMC6-209ENST00000489535 ATP8B2P98198 1209 aa9.61□□□□□ -0.87
SMC6-209ENST00000489535 ITPK1Q13572 414 aa9.61□□□□□ -0.87
SMC6-209ENST00000489535 RTN1Q16799 776 aa9.61□□□□□ -0.87
SMC6-209ENST00000489535 PTF1AQ7RTS3 328 aa9.61□□□□□ -0.87
SMC6-209ENST00000489535 KRT27Q7Z3Y8 459 aa9.61□□□□□ -0.87
SMC6-209ENST00000489535 PLEKHM2Q8IWE5 1019 aa9.61□□□□□ -0.87
SMC6-209ENST00000489535 UBL7Q96S82 380 aaPredicted RBP9.61□□□□□ -0.87
SMC6-209ENST00000489535 DCTPP1Q9H773 170 aa9.61□□□□□ -0.87
SMC6-209ENST00000489535 CCDC87Q9NVE4 849 aa9.61□□□□□ -0.87
SMC6-209ENST00000489535 STOML1Q9UBI4 398 aa9.61□□□□□ -0.87
SMC6-209ENST00000489535 UTYO14607 1347 aa9.6□□□□□ -0.87
SMC6-209ENST00000489535 GRM8O00222 908 aa9.6□□□□□ -0.87
SMC6-209ENST00000489535 EPB42P16452 691 aa9.6□□□□□ -0.87
SMC6-209ENST00000489535 IL6STP40189 918 aaPredicted RBP9.6□□□□□ -0.87
SMC6-209ENST00000489535 CRKLP46109 303 aaKnown RBP9.6□□□□□ -0.87
SMC6-209ENST00000489535 NUCB1Q02818 461 aa9.6□□□□□ -0.87
SMC6-209ENST00000489535 GCKRQ14397 625 aa9.6□□□□□ -0.87
SMC6-209ENST00000489535 SETDB1Q15047 1291 aa9.6□□□□□ -0.87
SMC6-209ENST00000489535 ANKRD45Q5TZF3 282 aa9.6□□□□□ -0.87
SMC6-209ENST00000489535 HFE2Q6ZVN8 426 aa9.6□□□□□ -0.87
SMC6-209ENST00000489535 NPM2Q86SE8 214 aaKnown RBP9.6□□□□□ -0.87
SMC6-209ENST00000489535 DTX1Q86Y01 620 aa9.6□□□□□ -0.87
SMC6-209ENST00000489535 LARGE2Q8N3Y3 721 aa9.6□□□□□ -0.87
SMC6-209ENST00000489535 ARXQ96QS3 562 aa9.6□□□□□ -0.87
SMC6-209ENST00000489535 HDAC5Q9UQL6 1122 aa9.6□□□□□ -0.87
SMC6-209ENST00000489535 MYH7P12883 1935 aa9.6□□□□□ -0.87
SMC6-209ENST00000489535 MAP3K15Q6ZN16 1313 aa9.59□□□□□ -0.87
SMC6-209ENST00000489535 MYH13Q9UKX3 1938 aa9.59□□□□□ -0.87
SMC6-209ENST00000489535 PNMA6EA0A0J9YXQ4 647 aa9.59□□□□□ -0.87
SMC6-209ENST00000489535 INTS5Q6P9B9 1019 aaKnown RBP9.59□□□□□ -0.87
SMC6-209ENST00000489535 CHD1LQ86WJ1 897 aa9.59□□□□□ -0.87
SMC6-209ENST00000489535 SIX5Q8N196 739 aa9.59□□□□□ -0.87
SMC6-209ENST00000489535 SUCLG2Q96I99 432 aa9.59□□□□□ -0.87
SMC6-209ENST00000489535 KRTAP4-11Q9BYQ6 195 aa9.59□□□□□ -0.87
SMC6-209ENST00000489535 LNPKQ9C0E8 428 aa9.59□□□□□ -0.87
SMC6-209ENST00000489535 SRA1Q9HD15 236 aaKnown RBP9.59□□□□□ -0.87
SMC6-209ENST00000489535 COL15A1P39059 1388 aa9.59□□□□□ -0.87
SMC6-209ENST00000489535 QSER1Q2KHR3 1735 aa9.59□□□□□ -0.87
SMC6-209ENST00000489535 CACNA1SQ13698 1873 aa9.58□□□□□ -0.88
SMC6-209ENST00000489535 USP17L3A6NCW0 530 aa9.58□□□□□ -0.88
SMC6-209ENST00000489535 USP17L4A6NCW7 530 aa9.58□□□□□ -0.88
SMC6-209ENST00000489535 PALM3A6NDB9 673 aaPredicted RBP9.58□□□□□ -0.88
SMC6-209ENST00000489535 RARAP10276 462 aa9.58□□□□□ -0.88
SMC6-209ENST00000489535 EIF2AK2P19525 551 aaKnown RBP9.58□□□□□ -0.88
SMC6-209ENST00000489535 IDH3AP50213 366 aa9.58□□□□□ -0.88
SMC6-209ENST00000489535 NRLP54845 237 aa9.58□□□□□ -0.88
SMC6-209ENST00000489535 USP17L2Q6R6M4 530 aa9.58□□□□□ -0.88
SMC6-209ENST00000489535 FAM196AQ6ZSG2 479 aa9.58□□□□□ -0.88
SMC6-209ENST00000489535 USP17L1Q7RTZ2 530 aa9.58□□□□□ -0.88
SMC6-209ENST00000489535 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.58□□□□□ -0.88
SMC6-209ENST00000489535 PPP1R42Q7Z4L9 355 aa9.58□□□□□ -0.88
SMC6-209ENST00000489535 ARMC10Q8N2F6 343 aa9.58□□□□□ -0.88
SMC6-209ENST00000489535 OGFOD1Q8N543 542 aa9.58□□□□□ -0.88
SMC6-209ENST00000489535 LINC00116Q8NCU8 138 aa9.58□□□□□ -0.88
SMC6-209ENST00000489535 SSH3Q8TE77 659 aa9.58□□□□□ -0.88
SMC6-209ENST00000489535 SCG3Q8WXD2 468 aaKnown RBP9.58□□□□□ -0.88
SMC6-209ENST00000489535 CWC25Q9NXE8 425 aaPredicted RBP9.58□□□□□ -0.88
SMC6-209ENST00000489535 ADGRE2Q9UHX3 823 aa9.58□□□□□ -0.88
SMC6-209ENST00000489535 A0A087WZG4 1122 aa9.57□□□□□ -0.88
SMC6-209ENST00000489535 PRR19A6NJB7 356 aa9.57□□□□□ -0.88
SMC6-209ENST00000489535 SRGAP3O43295 1099 aa9.57□□□□□ -0.88
SMC6-209ENST00000489535 SASH3O75995 380 aa9.57□□□□□ -0.88
SMC6-209ENST00000489535 EIF5P55010 431 aaKnown RBP9.57□□□□□ -0.88
SMC6-209ENST00000489535 NFIAQ12857 509 aa9.57□□□□□ -0.88
SMC6-209ENST00000489535 TCIRG1Q13488 830 aa9.57□□□□□ -0.88
SMC6-209ENST00000489535 HLFQ16534 295 aa9.57□□□□□ -0.88
SMC6-209ENST00000489535 HSP90AB3PQ58FF7 597 aa9.57□□□□□ -0.88
SMC6-209ENST00000489535 UBE3BQ7Z3V4 1068 aa9.57□□□□□ -0.88
SMC6-209ENST00000489535 CCDC191Q8NCU4 936 aa9.57□□□□□ -0.88
SMC6-209ENST00000489535 JARID2Q92833 1246 aaPredicted RBP9.57□□□□□ -0.88
SMC6-209ENST00000489535 ISCA1Q9BUE6 129 aa9.57□□□□□ -0.88
SMC6-209ENST00000489535 BICC1Q9H694 974 aaKnown RBP9.57□□□□□ -0.88
SMC6-209ENST00000489535 C11orf16Q9NQ32 467 aa9.57□□□□□ -0.88
SMC6-209ENST00000489535 CCNL1Q9UK58 526 aaPredicted RBP9.57□□□□□ -0.88
SMC6-209ENST00000489535 EXOC6BQ9Y2D4 811 aa9.57□□□□□ -0.88
SMC6-209ENST00000489535 CNTNAP4Q9C0A0 1308 aa9.56□□□□□ -0.88
SMC6-209ENST00000489535 ARAP2Q8WZ64 1704 aa9.56□□□□□ -0.88
SMC6-209ENST00000489535 MYO5AQ9Y4I1 1855 aaKnown RBP9.56□□□□□ -0.88
SMC6-209ENST00000489535 ERVV-1B6SEH8 477 aa9.56□□□□□ -0.88
SMC6-209ENST00000489535 RXRBP28702 533 aa9.56□□□□□ -0.88
SMC6-209ENST00000489535 GRIK1P39086 918 aa9.56□□□□□ -0.88
SMC6-209ENST00000489535 MTX1Q13505 466 aa9.56□□□□□ -0.88
SMC6-209ENST00000489535 IL22RA1Q8N6P7 574 aa9.56□□□□□ -0.88
SMC6-209ENST00000489535 PLD4Q96BZ4 506 aa9.56□□□□□ -0.88
SMC6-209ENST00000489535 KAZALD1Q96I82 304 aa9.56□□□□□ -0.88
SMC6-209ENST00000489535 DHX15O43143 795 aaKnown RBP9.55□□□□□ -0.88
SMC6-209ENST00000489535 SMARCA5O60264 1052 aaPredicted RBP9.55□□□□□ -0.88
SMC6-209ENST00000489535 TRIM37O94972 964 aa9.55□□□□□ -0.88
SMC6-209ENST00000489535 CASP7P55210 303 aa9.55□□□□□ -0.88
SMC6-209ENST00000489535 MAP4K3Q8IVH8 894 aa9.55□□□□□ -0.88
SMC6-209ENST00000489535 BCL11AQ9H165 835 aa9.55□□□□□ -0.88
SMC6-209ENST00000489535 EP400Q96L91 3159 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms