RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 SEMA3EO15041 775 aa14.35□□□□□ -0.11
HDAC6-233ENST00000489352 ZYXQ15942 572 aaKnown RBP14.35□□□□□ -0.11
HDAC6-233ENST00000489352 CRACR2BQ8N4Y2 399 aaPredicted RBP14.35□□□□□ -0.11
HDAC6-233ENST00000489352 FAM163AQ96GL9 167 aaPredicted RBP14.35□□□□□ -0.11
HDAC6-233ENST00000489352 SUCLG2Q96I99 432 aa14.35□□□□□ -0.11
HDAC6-233ENST00000489352 CERS4Q9HA82 394 aa14.35□□□□□ -0.11
HDAC6-233ENST00000489352 EMILIN3Q9NT22 766 aa14.35□□□□□ -0.11
HDAC6-233ENST00000489352 GINM1Q9NU53 330 aa14.35□□□□□ -0.11
HDAC6-233ENST00000489352 MROH7-TTC4A0A0A0MT08 1334 aa14.35□□□□□ -0.11
HDAC6-233ENST00000489352 ZNF236Q9UL36 1845 aa14.34□□□□□ -0.11
HDAC6-233ENST00000489352 ZBBXA8MT70 800 aa14.34□□□□□ -0.11
HDAC6-233ENST00000489352 APAF1O14727 1248 aa14.34□□□□□ -0.11
HDAC6-233ENST00000489352 IGHA2P01877 340 aa14.34□□□□□ -0.11
HDAC6-233ENST00000489352 MYOGP15173 224 aa14.34□□□□□ -0.11
HDAC6-233ENST00000489352 ACLYP53396 1101 aa14.34□□□□□ -0.11
HDAC6-233ENST00000489352 RALBP1Q15311 655 aa14.34□□□□□ -0.11
HDAC6-233ENST00000489352 SLC4A10Q6U841 1118 aa14.34□□□□□ -0.11
HDAC6-233ENST00000489352 GLT1D1Q96MS3 346 aa14.34□□□□□ -0.11
HDAC6-233ENST00000489352 BTBD7Q9P203 1132 aa14.34□□□□□ -0.11
HDAC6-233ENST00000489352 BRWD1Q9NSI6 2320 aa14.33□□□□□ -0.11
HDAC6-233ENST00000489352 MOXD2PA6NHM9 499 aa14.33□□□□□ -0.12
HDAC6-233ENST00000489352 DCXO43602 365 aa14.33□□□□□ -0.12
HDAC6-233ENST00000489352 MAP4K4O95819 1239 aaPredicted RBP14.33□□□□□ -0.12
HDAC6-233ENST00000489352 TMEM67Q5HYA8 995 aa14.33□□□□□ -0.12
HDAC6-233ENST00000489352 KRT40Q6A162 431 aa14.33□□□□□ -0.12
HDAC6-233ENST00000489352 CATSPERGQ6ZRH7 1159 aa14.33□□□□□ -0.12
HDAC6-233ENST00000489352 FAM178BQ8IXR5 827 aa14.33□□□□□ -0.12
HDAC6-233ENST00000489352 KLHDC4Q8TBB5 520 aa14.33□□□□□ -0.12
HDAC6-233ENST00000489352 PHOX2BQ99453 314 aa14.33□□□□□ -0.12
HDAC6-233ENST00000489352 BICC1Q9H694 974 aaKnown RBP14.33□□□□□ -0.12
HDAC6-233ENST00000489352 GPR75-ASB3A0A0A6YYF3 556 aa14.32□□□□□ -0.12
HDAC6-233ENST00000489352 ALDH1L1O75891 902 aa14.32□□□□□ -0.12
HDAC6-233ENST00000489352 GDF11O95390 407 aa14.32□□□□□ -0.12
HDAC6-233ENST00000489352 LDHCP07864 332 aa14.32□□□□□ -0.12
HDAC6-233ENST00000489352 ATP2A2P16615 1042 aaKnown RBP14.32□□□□□ -0.12
HDAC6-233ENST00000489352 CYP2C18P33260 490 aa14.32□□□□□ -0.12
HDAC6-233ENST00000489352 USP14P54578 494 aa14.32□□□□□ -0.12
HDAC6-233ENST00000489352 ARNTL2Q8WYA1 636 aa14.32□□□□□ -0.12
HDAC6-233ENST00000489352 SRCIN1Q9C0H9 1055 aa14.32□□□□□ -0.12
HDAC6-233ENST00000489352 DHX36Q9H2U1 1008 aaKnown RBP14.32□□□□□ -0.12
HDAC6-233ENST00000489352 NRBP1Q9UHY1 535 aa14.32□□□□□ -0.12
HDAC6-233ENST00000489352 ZNF318Q5VUA4 2279 aa14.32□□□□□ -0.12
HDAC6-233ENST00000489352 COBLO75128 1261 aa14.31□□□□□ -0.12
HDAC6-233ENST00000489352 AKR1A1P14550 325 aa14.31□□□□□ -0.12
HDAC6-233ENST00000489352 PTPN5P54829 565 aa14.31□□□□□ -0.12
HDAC6-233ENST00000489352 RHBDL3P58872 404 aa14.31□□□□□ -0.12
HDAC6-233ENST00000489352 GSTO1P78417 241 aa14.31□□□□□ -0.12
HDAC6-233ENST00000489352 SAMD1Q6SPF0 538 aaPredicted RBP14.31□□□□□ -0.12
HDAC6-233ENST00000489352 ERICH6Q7L0X2 663 aa14.31□□□□□ -0.12
HDAC6-233ENST00000489352 RPUSD2Q8IZ73 545 aaKnown RBP14.31□□□□□ -0.12
HDAC6-233ENST00000489352 MAML3Q96JK9 1138 aa14.31□□□□□ -0.12
HDAC6-233ENST00000489352 NOL10Q9BSC4 688 aaKnown RBP14.31□□□□□ -0.12
HDAC6-233ENST00000489352 ZBTB21Q9ULJ3 1066 aa14.31□□□□□ -0.12
HDAC6-233ENST00000489352 ELP1O95163 1332 aa14.31□□□□□ -0.12
HDAC6-233ENST00000489352 ZFHX2Q9C0A1 2572 aaPredicted RBP14.3□□□□□ -0.12
HDAC6-233ENST00000489352 GFRA3O60609 400 aa14.3□□□□□ -0.12
HDAC6-233ENST00000489352 CA3P07451 260 aa14.3□□□□□ -0.12
HDAC6-233ENST00000489352 PLS1Q14651 629 aa14.3□□□□□ -0.12
HDAC6-233ENST00000489352 KCNA10Q16322 511 aa14.3□□□□□ -0.12
HDAC6-233ENST00000489352 ATP2B3Q16720 1220 aa14.3□□□□□ -0.12
HDAC6-233ENST00000489352 LBX2Q6XYB7 198 aa14.3□□□□□ -0.12
HDAC6-233ENST00000489352 TEX11Q8IYF3 940 aa14.3□□□□□ -0.12
HDAC6-233ENST00000489352 KAZALD1Q96I82 304 aa14.3□□□□□ -0.12
HDAC6-233ENST00000489352 MOV10L1Q9BXT6 1211 aaKnown RBP14.3□□□□□ -0.12
HDAC6-233ENST00000489352 NBPF7P0C2Y1 421 aaPredicted RBP14.29□□□□□ -0.12
HDAC6-233ENST00000489352 ERCC3P19447 782 aa14.29□□□□□ -0.12
HDAC6-233ENST00000489352 MECOMQ03112 1051 aa14.29□□□□□ -0.12
HDAC6-233ENST00000489352 HFE2Q6ZVN8 426 aa14.29□□□□□ -0.12
HDAC6-233ENST00000489352 NCAPG2Q86XI2 1143 aa14.29□□□□□ -0.12
HDAC6-233ENST00000489352 FOXP4Q8IVH2 680 aaPredicted RBP14.29□□□□□ -0.12
HDAC6-233ENST00000489352 C12orf42Q96LP6 360 aa14.29□□□□□ -0.12
HDAC6-233ENST00000489352 MROH8Q9H579 483 aa14.29□□□□□ -0.12
HDAC6-233ENST00000489352 HOXC10Q9NYD6 342 aa14.29□□□□□ -0.12
HDAC6-233ENST00000489352 CNPY2Q9Y2B0 182 aa14.29□□□□□ -0.12
HDAC6-233ENST00000489352 A0A0U1RQG5 324 aaPredicted RBP14.28□□□□□ -0.12
HDAC6-233ENST00000489352 SPDYE16A6NNV3 312 aaPredicted RBP14.28□□□□□ -0.12
HDAC6-233ENST00000489352 EYA2O00167 538 aa14.28□□□□□ -0.12
HDAC6-233ENST00000489352 ARVCFO00192 962 aa14.28□□□□□ -0.12
HDAC6-233ENST00000489352 ZNF536O15090 1300 aa14.28□□□□□ -0.12
HDAC6-233ENST00000489352 FCER1AP12319 257 aa14.28□□□□□ -0.12
HDAC6-233ENST00000489352 PHKA1P46020 1223 aa14.28□□□□□ -0.12
HDAC6-233ENST00000489352 JAG1P78504 1218 aa14.28□□□□□ -0.12
HDAC6-233ENST00000489352 RABL6Q3YEC7 729 aaPredicted RBP14.28□□□□□ -0.12
HDAC6-233ENST00000489352 ATF7IPQ6VMQ6 1270 aa14.28□□□□□ -0.12
HDAC6-233ENST00000489352 ABRAQ8N0Z2 381 aa14.28□□□□□ -0.12
HDAC6-233ENST00000489352 PCSK9Q8NBP7 692 aaKnown RBP14.28□□□□□ -0.12
HDAC6-233ENST00000489352 SHCBP1Q8NEM2 672 aa14.28□□□□□ -0.12
HDAC6-233ENST00000489352 PRRX2Q99811 253 aa14.28□□□□□ -0.12
HDAC6-233ENST00000489352 SPATC1LQ9H0A9 340 aa14.28□□□□□ -0.12
HDAC6-233ENST00000489352 HIPK3Q9H422 1215 aa14.28□□□□□ -0.12
HDAC6-233ENST00000489352 SPC25Q9HBM1 224 aa14.28□□□□□ -0.12
HDAC6-233ENST00000489352 CEP126Q9P2H0 1117 aa14.28□□□□□ -0.12
HDAC6-233ENST00000489352 C5orf42Q9H799 3197 aa14.27□□□□□ -0.12
HDAC6-233ENST00000489352 KIF28PB7ZC32 967 aa14.27□□□□□ -0.13
HDAC6-233ENST00000489352 ADAMTS4O75173 837 aa14.27□□□□□ -0.13
HDAC6-233ENST00000489352 VCAM1P19320 739 aa14.27□□□□□ -0.13
HDAC6-233ENST00000489352 CDK7P50613 346 aa14.27□□□□□ -0.13
HDAC6-233ENST00000489352 ERMP1Q7Z2K6 904 aa14.27□□□□□ -0.13
HDAC6-233ENST00000489352 TINF2Q9BSI4 451 aa14.27□□□□□ -0.13
HDAC6-233ENST00000489352 RPAP3Q9H6T3 665 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms