RNA–Protein interactions for RNA: ENST00000489324.1

FDPS-214, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-214ENST00000489324 PNMA3Q9UL41 463 aa11.49□□□□□ -0.57
FDPS-214ENST00000489324 STX8Q9UNK0 236 aa11.49□□□□□ -0.57
FDPS-214ENST00000489324 A0A1W2PRG0 241 aa11.48□□□□□ -0.57
FDPS-214ENST00000489324 BTBD19C9JJ37 291 aa11.48□□□□□ -0.57
FDPS-214ENST00000489324 WDR46O15213 610 aaKnown RBP11.48□□□□□ -0.57
FDPS-214ENST00000489324 OSBPP22059 807 aa11.48□□□□□ -0.57
FDPS-214ENST00000489324 ATP2B2Q01814 1243 aa11.48□□□□□ -0.57
FDPS-214ENST00000489324 MOGSQ13724 837 aa11.48□□□□□ -0.57
FDPS-214ENST00000489324 RCSD1Q6JBY9 416 aa11.48□□□□□ -0.57
FDPS-214ENST00000489324 GADL1Q6ZQY3 521 aa11.48□□□□□ -0.57
FDPS-214ENST00000489324 DHX32Q7L7V1 743 aaKnown RBP11.48□□□□□ -0.57
FDPS-214ENST00000489324 RASEFQ8IZ41 740 aa11.48□□□□□ -0.57
FDPS-214ENST00000489324 PTPN18Q99952 460 aa11.48□□□□□ -0.57
FDPS-214ENST00000489324 TM6SF1Q9BZW5 370 aa11.48□□□□□ -0.57
FDPS-214ENST00000489324 EMILIN3Q9NT22 766 aa11.48□□□□□ -0.57
FDPS-214ENST00000489324 SNX14Q9Y5W7 946 aa11.48□□□□□ -0.57
FDPS-214ENST00000489324 THSD7BQ9C0I4 1608 aa11.48□□□□□ -0.57
FDPS-214ENST00000489324 LAMA4Q16363 1823 aa11.48□□□□□ -0.57
FDPS-214ENST00000489324 TNKSO95271 1327 aa11.47□□□□□ -0.57
FDPS-214ENST00000489324 USP17L15C9J2P7 530 aa11.47□□□□□ -0.57
FDPS-214ENST00000489324 USP17L13C9JLJ4 530 aa11.47□□□□□ -0.57
FDPS-214ENST00000489324 USP17L11C9JVI0 530 aa11.47□□□□□ -0.57
FDPS-214ENST00000489324 USP17L18D6R9N7 530 aa11.47□□□□□ -0.57
FDPS-214ENST00000489324 USP17L22D6RA61 530 aa11.47□□□□□ -0.57
FDPS-214ENST00000489324 USP17L17D6RBQ6 530 aa11.47□□□□□ -0.57
FDPS-214ENST00000489324 USP17L19D6RCP7 530 aa11.47□□□□□ -0.57
FDPS-214ENST00000489324 USP17L20D6RJB6 530 aa11.47□□□□□ -0.57
FDPS-214ENST00000489324 F5H6K3 240 aa11.47□□□□□ -0.57
FDPS-214ENST00000489324 KLRC3Q07444 240 aa11.47□□□□□ -0.57
FDPS-214ENST00000489324 USP17L24Q0WX57 530 aa11.47□□□□□ -0.57
FDPS-214ENST00000489324 GPAT2Q6NUI2 795 aa11.47□□□□□ -0.57
FDPS-214ENST00000489324 FBXL16Q8N461 479 aa11.47□□□□□ -0.57
FDPS-214ENST00000489324 ZIC5Q96T25 663 aa11.47□□□□□ -0.57
FDPS-214ENST00000489324 PARK7Q99497 189 aaKnown RBP11.47□□□□□ -0.57
FDPS-214ENST00000489324 KAT14Q9H8E8 782 aa11.47□□□□□ -0.57
FDPS-214ENST00000489324 ZFYVE28Q9HCC9 887 aa11.47□□□□□ -0.57
FDPS-214ENST00000489324 WBP1LQ9NX94 342 aa11.47□□□□□ -0.57
FDPS-214ENST00000489324 RBM19Q9Y4C8 960 aaKnown RBP11.47□□□□□ -0.57
FDPS-214ENST00000489324 MYPNQ86TC9 1320 aa11.46□□□□□ -0.57
FDPS-214ENST00000489324 PDHXO00330 501 aa11.46□□□□□ -0.57
FDPS-214ENST00000489324 IGF2BP3O00425 579 aaKnown RBP eCLIP11.46□□□□□ -0.57
FDPS-214ENST00000489324 IFIT3O14879 490 aaKnown RBP11.46□□□□□ -0.57
FDPS-214ENST00000489324 PRC1O43663 620 aa11.46□□□□□ -0.57
FDPS-214ENST00000489324 VCAM1P19320 739 aa11.46□□□□□ -0.57
FDPS-214ENST00000489324 LIFRP42702 1097 aa11.46□□□□□ -0.57
FDPS-214ENST00000489324 EXOSC10Q01780 885 aaKnown RBP11.46□□□□□ -0.57
FDPS-214ENST00000489324 WTAPQ15007 396 aa11.46□□□□□ -0.57
FDPS-214ENST00000489324 NOM1Q5C9Z4 860 aaKnown RBP11.46□□□□□ -0.57
FDPS-214ENST00000489324 IFIT1BQ5T764 474 aaKnown RBP11.46□□□□□ -0.57
FDPS-214ENST00000489324 SLFN13Q68D06 897 aa11.46□□□□□ -0.57
FDPS-214ENST00000489324 BLOC1S2Q6QNY1 142 aa11.46□□□□□ -0.57
FDPS-214ENST00000489324 CATSPERGQ6ZRH7 1159 aa11.46□□□□□ -0.57
FDPS-214ENST00000489324 CYB5R4Q7L1T6 521 aa11.46□□□□□ -0.57
FDPS-214ENST00000489324 FAM43AQ8N2R8 423 aa11.46□□□□□ -0.57
FDPS-214ENST00000489324 ENAHQ8N8S7 591 aaPredicted RBP11.46□□□□□ -0.57
FDPS-214ENST00000489324 DCAF4Q8WV16 495 aa11.46□□□□□ -0.57
FDPS-214ENST00000489324 GMCL1Q96IK5 515 aa11.46□□□□□ -0.57
FDPS-214ENST00000489324 TMEM47Q9BQJ4 181 aa11.46□□□□□ -0.57
FDPS-214ENST00000489324 RNF186Q9NXI6 227 aa11.46□□□□□ -0.57
FDPS-214ENST00000489324 HOXC10Q9NYD6 342 aa11.46□□□□□ -0.57
FDPS-214ENST00000489324 TAF6LQ9Y6J9 622 aa11.46□□□□□ -0.57
FDPS-214ENST00000489324 GREB1LQ9C091 1923 aaPredicted RBP11.46□□□□□ -0.58
FDPS-214ENST00000489324 NMT2O60551 498 aa11.45□□□□□ -0.58
FDPS-214ENST00000489324 PLA2G6O60733 806 aa11.45□□□□□ -0.58
FDPS-214ENST00000489324 SEC24BO95487 1268 aa11.45□□□□□ -0.58
FDPS-214ENST00000489324 NDUFB10O96000 172 aa11.45□□□□□ -0.58
FDPS-214ENST00000489324 FDX1P10109 184 aa11.45□□□□□ -0.58
FDPS-214ENST00000489324 SLC1A4P43007 532 aa11.45□□□□□ -0.58
FDPS-214ENST00000489324 GCLCP48506 637 aaPredicted RBP11.45□□□□□ -0.58
FDPS-214ENST00000489324 IRX3P78415 501 aaPredicted RBP11.45□□□□□ -0.58
FDPS-214ENST00000489324 SEC23AQ15436 765 aa11.45□□□□□ -0.58
FDPS-214ENST00000489324 TAF1CQ15572 869 aaPredicted RBP11.45□□□□□ -0.58
FDPS-214ENST00000489324 ADCK5Q3MIX3 580 aa11.45□□□□□ -0.58
FDPS-214ENST00000489324 TMEM67Q5HYA8 995 aa11.45□□□□□ -0.58
FDPS-214ENST00000489324 CLEC10AQ8IUN9 316 aa11.45□□□□□ -0.58
FDPS-214ENST00000489324 LRRC47Q8N1G4 583 aaKnown RBP11.45□□□□□ -0.58
FDPS-214ENST00000489324 IGDCC4Q8TDY8 1250 aa11.45□□□□□ -0.58
FDPS-214ENST00000489324 JAKMIP1Q96N16 626 aaKnown RBP11.45□□□□□ -0.58
FDPS-214ENST00000489324 MAP3K14Q99558 947 aa11.45□□□□□ -0.58
FDPS-214ENST00000489324 ZKSCAN3Q9BRR0 538 aa11.45□□□□□ -0.58
FDPS-214ENST00000489324 BACH2Q9BYV9 841 aa11.45□□□□□ -0.58
FDPS-214ENST00000489324 RPAP3Q9H6T3 665 aaPredicted RBP11.45□□□□□ -0.58
FDPS-214ENST00000489324 ZSWIM6Q9HCJ5 1215 aa11.45□□□□□ -0.58
FDPS-214ENST00000489324 ATAD5Q96QE3 1844 aa11.44□□□□□ -0.58
FDPS-214ENST00000489324 SH2B2O14492 632 aaPredicted RBP11.44□□□□□ -0.58
FDPS-214ENST00000489324 SNHG28P0DPA3 235 aa11.44□□□□□ -0.58
FDPS-214ENST00000489324 BMP3P12645 472 aa11.44□□□□□ -0.58
FDPS-214ENST00000489324 RBM25P49756 843 aaKnown RBP11.44□□□□□ -0.58
FDPS-214ENST00000489324 RCAN1P53805 252 aa11.44□□□□□ -0.58
FDPS-214ENST00000489324 ANTXR2P58335 489 aa11.44□□□□□ -0.58
FDPS-214ENST00000489324 COG2Q14746 738 aa11.44□□□□□ -0.58
FDPS-214ENST00000489324 ZYXQ15942 572 aaKnown RBP11.44□□□□□ -0.58
FDPS-214ENST00000489324 TREML2Q5T2D2 321 aa11.44□□□□□ -0.58
FDPS-214ENST00000489324 GPATCH4Q5T3I0 446 aaKnown RBP11.44□□□□□ -0.58
FDPS-214ENST00000489324 LBX2Q6XYB7 198 aa11.44□□□□□ -0.58
FDPS-214ENST00000489324 FAM160B2Q86V87 743 aa11.44□□□□□ -0.58
FDPS-214ENST00000489324 SGMS1Q86VZ5 419 aa11.44□□□□□ -0.58
FDPS-214ENST00000489324 MB21D1Q8N884 522 aa11.44□□□□□ -0.58
FDPS-214ENST00000489324 PNMA1Q8ND90 353 aa11.44□□□□□ -0.58
FDPS-214ENST00000489324 CHURC1Q8WUH1 139 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms