RNA–Protein interactions for RNA: ENST00000489048.1

NEB-215, Transcript of nebulin, humanhuman

TSL 1 (best)

Gene NEB, Length 2,738 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-215ENST00000489048 ERVK-24P63145 666 aa12.43□□□□□ -0.42
NEB-215ENST00000489048 AMPD2Q01433 879 aa12.43□□□□□ -0.42
NEB-215ENST00000489048 SPAG1Q07617 926 aa12.43□□□□□ -0.42
NEB-215ENST00000489048 KIF4BQ2VIQ3 1234 aa12.43□□□□□ -0.42
NEB-215ENST00000489048 PYM1Q9BRP8 204 aaKnown RBP12.43□□□□□ -0.42
NEB-215ENST00000489048 ABHD10Q9NUJ1 306 aa12.43□□□□□ -0.42
NEB-215ENST00000489048 RWDD2AQ9UIY3 292 aa12.43□□□□□ -0.42
NEB-215ENST00000489048 IQSEC3Q9UPP2 1182 aaPredicted RBP12.43□□□□□ -0.42
NEB-215ENST00000489048 DLEC1Q9Y238 1755 aa12.43□□□□□ -0.42
NEB-215ENST00000489048 PRKAB2O43741 272 aa12.43□□□□□ -0.42
NEB-215ENST00000489048 ACTN2P35609 894 aa12.43□□□□□ -0.42
NEB-215ENST00000489048 E2F4Q16254 413 aa12.43□□□□□ -0.42
NEB-215ENST00000489048 WDR93Q6P2C0 686 aa12.43□□□□□ -0.42
NEB-215ENST00000489048 CYP26C1Q6V0L0 522 aa12.43□□□□□ -0.42
NEB-215ENST00000489048 ZKSCAN3Q9BRR0 538 aa12.43□□□□□ -0.42
NEB-215ENST00000489048 PDE11AQ9HCR9 933 aa12.43□□□□□ -0.42
NEB-215ENST00000489048 PUF60Q9UHX1 559 aaKnown RBP12.43□□□□□ -0.42
NEB-215ENST00000489048 ZNF330Q9Y3S2 320 aaPredicted RBP12.43□□□□□ -0.42
NEB-215ENST00000489048 SLC4A4Q9Y6R1 1079 aa12.43□□□□□ -0.42
NEB-215ENST00000489048 GPTP24298 496 aa12.42□□□□□ -0.42
NEB-215ENST00000489048 AFMP43652 599 aa12.42□□□□□ -0.42
NEB-215ENST00000489048 STX17P56962 302 aa12.42□□□□□ -0.42
NEB-215ENST00000489048 PPARAQ07869 468 aa12.42□□□□□ -0.42
NEB-215ENST00000489048 MAPK8IP2Q13387 824 aaPredicted RBP12.42□□□□□ -0.42
NEB-215ENST00000489048 KRT31Q15323 416 aa12.42□□□□□ -0.42
NEB-215ENST00000489048 ABCB6Q9NP58 842 aa12.42□□□□□ -0.42
NEB-215ENST00000489048 A0A0U1RQG5 324 aaPredicted RBP12.42□□□□□ -0.42
NEB-215ENST00000489048 CTAGE15A4D2H0 777 aa12.42□□□□□ -0.42
NEB-215ENST00000489048 ERVV-1B6SEH8 477 aa12.42□□□□□ -0.42
NEB-215ENST00000489048 CTAGE8P0CG41 777 aa12.42□□□□□ -0.42
NEB-215ENST00000489048 ATP2C1P98194 919 aaPredicted RBP12.42□□□□□ -0.42
NEB-215ENST00000489048 EARS2Q5JPH6 523 aaKnown RBP12.42□□□□□ -0.42
NEB-215ENST00000489048 RRP12Q5JTH9 1297 aaKnown RBP12.42□□□□□ -0.42
NEB-215ENST00000489048 KLHL10Q6JEL2 608 aa12.42□□□□□ -0.42
NEB-215ENST00000489048 CTAGE6Q86UF2 777 aa12.42□□□□□ -0.42
NEB-215ENST00000489048 CTAGE4Q8IX94 777 aa12.42□□□□□ -0.42
NEB-215ENST00000489048 ACRBPQ8NEB7 543 aa12.42□□□□□ -0.42
NEB-215ENST00000489048 ZSWIM4Q9H7M6 989 aa12.42□□□□□ -0.42
NEB-215ENST00000489048 PRDM11Q9NQV5 511 aa12.42□□□□□ -0.42
NEB-215ENST00000489048 TRMT112Q9UI30 125 aaKnown RBP12.42□□□□□ -0.42
NEB-215ENST00000489048 DUOX1Q9NRD9 1551 aa12.42□□□□□ -0.42
NEB-215ENST00000489048 NUP98P52948 1817 aa12.42□□□□□ -0.42
NEB-215ENST00000489048 FAM205CA6NFA0 338 aa12.41□□□□□ -0.42
NEB-215ENST00000489048 CMTR1Q8N1G2 835 aaKnown RBP12.41□□□□□ -0.42
NEB-215ENST00000489048 CPLX3Q8WVH0 158 aa12.41□□□□□ -0.42
NEB-215ENST00000489048 BBXQ8WY36 941 aaPredicted RBP12.41□□□□□ -0.42
NEB-215ENST00000489048 UBAC1Q9BSL1 405 aa12.41□□□□□ -0.42
NEB-215ENST00000489048 RBM28Q9NW13 759 aaKnown RBP12.41□□□□□ -0.42
NEB-215ENST00000489048 CTNND2Q9UQB3 1225 aa12.41□□□□□ -0.42
NEB-215ENST00000489048 XDHP47989 1333 aa12.41□□□□□ -0.42
NEB-215ENST00000489048 SLIT2O94813 1529 aa12.41□□□□□ -0.42
NEB-215ENST00000489048 TNKSO95271 1327 aa12.41□□□□□ -0.42
NEB-215ENST00000489048 COPB1P53618 953 aaKnown RBP12.41□□□□□ -0.42
NEB-215ENST00000489048 VSNL1P62760 191 aa12.41□□□□□ -0.42
NEB-215ENST00000489048 AKAP17AQ02040 695 aaKnown RBP12.41□□□□□ -0.42
NEB-215ENST00000489048 NPY5RQ15761 445 aa12.41□□□□□ -0.42
NEB-215ENST00000489048 ZNF662Q6ZS27 426 aa12.41□□□□□ -0.42
NEB-215ENST00000489048 FAM71BQ8TC56 605 aa12.41□□□□□ -0.42
NEB-215ENST00000489048 NUP133Q8WUM0 1156 aa12.41□□□□□ -0.42
NEB-215ENST00000489048 PIGBQ92521 554 aa12.41□□□□□ -0.42
NEB-215ENST00000489048 ESR2Q92731 530 aa12.41□□□□□ -0.42
NEB-215ENST00000489048 ABCA3Q99758 1704 aa12.41□□□□□ -0.42
NEB-215ENST00000489048 VPS54Q9P1Q0 977 aa12.41□□□□□ -0.42
NEB-215ENST00000489048 ASAP1Q9ULH1 1129 aa12.41□□□□□ -0.42
NEB-215ENST00000489048 GTPBP6O43824 516 aaPredicted RBP12.4□□□□□ -0.42
NEB-215ENST00000489048 ATP2B1P20020 1258 aa12.4□□□□□ -0.42
NEB-215ENST00000489048 LMAN1P49257 510 aa12.4□□□□□ -0.42
NEB-215ENST00000489048 PDXDC2PQ6P474 469 aa12.4□□□□□ -0.42
NEB-215ENST00000489048 CCDC82Q8N4S0 544 aa12.4□□□□□ -0.42
NEB-215ENST00000489048 CDC5LQ99459 802 aaKnown RBP12.4□□□□□ -0.42
NEB-215ENST00000489048 VIPAS39Q9H9C1 493 aa12.4□□□□□ -0.42
NEB-215ENST00000489048 IVLP07476 585 aa12.4□□□□□ -0.42
NEB-215ENST00000489048 CYP19A1P11511 503 aaPredicted RBP12.4□□□□□ -0.42
NEB-215ENST00000489048 CASP1P29466 404 aa12.4□□□□□ -0.42
NEB-215ENST00000489048 TRAPPC10P48553 1259 aa12.4□□□□□ -0.42
NEB-215ENST00000489048 GYS2P54840 703 aa12.4□□□□□ -0.42
NEB-215ENST00000489048 CASP8Q14790 479 aa12.4□□□□□ -0.42
NEB-215ENST00000489048 TTC38Q5R3I4 469 aa12.4□□□□□ -0.42
NEB-215ENST00000489048 SMYD4Q8IYR2 804 aaPredicted RBP12.4□□□□□ -0.42
NEB-215ENST00000489048 ZNF34Q8IZ26 560 aa12.4□□□□□ -0.42
NEB-215ENST00000489048 BRMS1Q9HCU9 246 aa12.4□□□□□ -0.42
NEB-215ENST00000489048 TOMM22Q9NS69 142 aa12.4□□□□□ -0.42
NEB-215ENST00000489048 MYO6Q9UM54 1294 aa12.4□□□□□ -0.42
NEB-215ENST00000489048 MYH2Q9UKX2 1941 aa12.4□□□□□ -0.43
NEB-215ENST00000489048 WNT7AO00755 349 aa12.39□□□□□ -0.43
NEB-215ENST00000489048 PAK1Q13153 545 aa12.39□□□□□ -0.43
NEB-215ENST00000489048 MCM6Q14566 821 aa12.39□□□□□ -0.43
NEB-215ENST00000489048 TCP11X2Q5H9J9 407 aa12.39□□□□□ -0.43
NEB-215ENST00000489048 TRAPPC11Q7Z392 1133 aa12.39□□□□□ -0.43
NEB-215ENST00000489048 MED4Q9NPJ6 270 aa12.39□□□□□ -0.43
NEB-215ENST00000489048 VPS18Q9P253 973 aa12.39□□□□□ -0.43
NEB-215ENST00000489048 RREB1Q92766 1687 aa12.39□□□□□ -0.43
NEB-215ENST00000489048 PSMD14O00487 310 aa12.39□□□□□ -0.43
NEB-215ENST00000489048 N4BP3O15049 544 aa12.39□□□□□ -0.43
NEB-215ENST00000489048 FGRP09769 529 aa12.39□□□□□ -0.43
NEB-215ENST00000489048 CALM1P0DP23 149 aa12.39□□□□□ -0.43
NEB-215ENST00000489048 CALM2P0DP24 149 aa12.39□□□□□ -0.43
NEB-215ENST00000489048 CALM3P0DP25 149 aa12.39□□□□□ -0.43
NEB-215ENST00000489048 PCP11498 1178 aaKnown RBP12.39□□□□□ -0.43
NEB-215ENST00000489048 ZNF658Q5TYW1 1059 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms