RNA–Protein interactions for RNA: ENST00000488966.1

YIPF3-207, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 337 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-207ENST00000488966 HOXC10Q9NYD6 342 aa13.09□□□□□ -0.31
YIPF3-207ENST00000488966 PRKAG2Q9UGJ0 569 aa13.09□□□□□ -0.31
YIPF3-207ENST00000488966 EXOC6BQ9Y2D4 811 aa13.09□□□□□ -0.31
YIPF3-207ENST00000488966 ATP11BQ9Y2G3 1177 aa13.09□□□□□ -0.31
YIPF3-207ENST00000488966 MYO5AQ9Y4I1 1855 aaKnown RBP13.08□□□□□ -0.32
YIPF3-207ENST00000488966 MPHOSPH10O00566 681 aaKnown RBP13.08□□□□□ -0.32
YIPF3-207ENST00000488966 STRNO43815 780 aa13.08□□□□□ -0.32
YIPF3-207ENST00000488966 CYP2D6P10635 497 aa13.08□□□□□ -0.32
YIPF3-207ENST00000488966 PDE6AP16499 860 aa13.08□□□□□ -0.32
YIPF3-207ENST00000488966 SHHQ15465 462 aa13.08□□□□□ -0.32
YIPF3-207ENST00000488966 CEP85Q6P2H3 762 aa13.08□□□□□ -0.32
YIPF3-207ENST00000488966 SLC39A5Q6ZMH5 540 aa13.08□□□□□ -0.32
YIPF3-207ENST00000488966 FTSJ3Q8IY81 847 aaKnown RBP13.08□□□□□ -0.32
YIPF3-207ENST00000488966 SLC44A5Q8NCS7 719 aa13.08□□□□□ -0.32
YIPF3-207ENST00000488966 SHCBP1Q8NEM2 672 aa13.08□□□□□ -0.32
YIPF3-207ENST00000488966 MCM9Q9NXL9 1143 aa13.08□□□□□ -0.32
YIPF3-207ENST00000488966 SEPT4O43236 478 aa13.07□□□□□ -0.32
YIPF3-207ENST00000488966 MYCNP04198 464 aaPredicted RBP13.07□□□□□ -0.32
YIPF3-207ENST00000488966 TRIM60Q495X7 471 aa13.07□□□□□ -0.32
YIPF3-207ENST00000488966 C9orf50Q5SZB4 431 aa13.07□□□□□ -0.32
YIPF3-207ENST00000488966 SLC9C2Q5TAH2 1124 aa13.07□□□□□ -0.32
YIPF3-207ENST00000488966 ZNF697Q5TEC3 545 aa13.07□□□□□ -0.32
YIPF3-207ENST00000488966 CLEC10AQ8IUN9 316 aa13.07□□□□□ -0.32
YIPF3-207ENST00000488966 SIAH1Q8IUQ4 282 aa13.07□□□□□ -0.32
YIPF3-207ENST00000488966 SDR42E1Q8WUS8 393 aa13.07□□□□□ -0.32
YIPF3-207ENST00000488966 CRNKL1Q9BZJ0 848 aaKnown RBP13.07□□□□□ -0.32
YIPF3-207ENST00000488966 IL1RAPL2Q9NP60 686 aa13.07□□□□□ -0.32
YIPF3-207ENST00000488966 PRDM5Q9NQX1 630 aaPredicted RBP13.07□□□□□ -0.32
YIPF3-207ENST00000488966 KBTBD13C9JR72 458 aa13.06□□□□□ -0.32
YIPF3-207ENST00000488966 DSG3P32926 999 aa13.06□□□□□ -0.32
YIPF3-207ENST00000488966 ADCYAP1R1P41586 468 aa13.06□□□□□ -0.32
YIPF3-207ENST00000488966 PLS1Q14651 629 aa13.06□□□□□ -0.32
YIPF3-207ENST00000488966 SNX17Q15036 470 aa13.06□□□□□ -0.32
YIPF3-207ENST00000488966 NCAPG2Q86XI2 1143 aa13.06□□□□□ -0.32
YIPF3-207ENST00000488966 ERC1Q8IUD2 1116 aa13.06□□□□□ -0.32
YIPF3-207ENST00000488966 SPICE1Q8N0Z3 855 aa13.06□□□□□ -0.32
YIPF3-207ENST00000488966 LCORLQ8N3X6 602 aa13.06□□□□□ -0.32
YIPF3-207ENST00000488966 MB21D1Q8N884 522 aa13.06□□□□□ -0.32
YIPF3-207ENST00000488966 BADQ92934 168 aa13.06□□□□□ -0.32
YIPF3-207ENST00000488966 FERMT2Q96AC1 680 aa13.06□□□□□ -0.32
YIPF3-207ENST00000488966 ATG4CQ96DT6 458 aa13.06□□□□□ -0.32
YIPF3-207ENST00000488966 DYNLL2Q96FJ2 89 aa13.06□□□□□ -0.32
YIPF3-207ENST00000488966 MROH8Q9H579 483 aa13.06□□□□□ -0.32
YIPF3-207ENST00000488966 DCP1AQ9NPI6 582 aaPredicted RBP13.06□□□□□ -0.32
YIPF3-207ENST00000488966 ZNF532Q9HCE3 1301 aa13.06□□□□□ -0.32
YIPF3-207ENST00000488966 MYH1P12882 1939 aa13.05□□□□□ -0.32
YIPF3-207ENST00000488966 TCRBV5S4A2TA0A5A2 114 aa13.05□□□□□ -0.32
YIPF3-207ENST00000488966 FLOT1O75955 427 aa13.05□□□□□ -0.32
YIPF3-207ENST00000488966 AKR1B1P15121 316 aa13.05□□□□□ -0.32
YIPF3-207ENST00000488966 LRRC41Q15345 812 aa13.05□□□□□ -0.32
YIPF3-207ENST00000488966 TTF1Q15361 905 aaPredicted RBP13.05□□□□□ -0.32
YIPF3-207ENST00000488966 FAM47AQ5JRC9 791 aa13.05□□□□□ -0.32
YIPF3-207ENST00000488966 TMEM179Q6ZVK1 233 aa13.05□□□□□ -0.32
YIPF3-207ENST00000488966 SH3RF1Q7Z6J0 888 aa13.05□□□□□ -0.32
YIPF3-207ENST00000488966 MAML3Q96JK9 1138 aa13.05□□□□□ -0.32
YIPF3-207ENST00000488966 CDX2Q99626 313 aaPredicted RBP13.05□□□□□ -0.32
YIPF3-207ENST00000488966 PDLIM7Q9NR12 457 aa13.05□□□□□ -0.32
YIPF3-207ENST00000488966 FRMPD3Q5JV73 1810 aa13.04□□□□□ -0.32
YIPF3-207ENST00000488966 TRIM43BA6NCK2 446 aa13.04□□□□□ -0.32
YIPF3-207ENST00000488966 SMIM22K7EJ46 135 aa13.04□□□□□ -0.32
YIPF3-207ENST00000488966 GOLIM4O00461 696 aa13.04□□□□□ -0.32
YIPF3-207ENST00000488966 PRKAB2O43741 272 aa13.04□□□□□ -0.32
YIPF3-207ENST00000488966 SLFNL1Q499Z3 407 aa13.04□□□□□ -0.32
YIPF3-207ENST00000488966 SAMD1Q6SPF0 538 aaPredicted RBP13.04□□□□□ -0.32
YIPF3-207ENST00000488966 ABRAQ8N0Z2 381 aa13.04□□□□□ -0.32
YIPF3-207ENST00000488966 RHPN1Q8TCX5 695 aa13.04□□□□□ -0.32
YIPF3-207ENST00000488966 TRIM43Q96BQ3 446 aaPredicted RBP13.04□□□□□ -0.32
YIPF3-207ENST00000488966 DNAJC2Q99543 621 aaKnown RBP13.04□□□□□ -0.32
YIPF3-207ENST00000488966 SEMA6BQ9H3T3 888 aa13.04□□□□□ -0.32
YIPF3-207ENST00000488966 VCPKMTQ9H867 229 aa13.04□□□□□ -0.32
YIPF3-207ENST00000488966 ARMT1Q9H993 441 aa13.04□□□□□ -0.32
YIPF3-207ENST00000488966 SLC5A4Q9NY91 659 aa13.04□□□□□ -0.32
YIPF3-207ENST00000488966 SWAP70Q9UH65 585 aa13.04□□□□□ -0.32
YIPF3-207ENST00000488966 TMX2Q9Y320 296 aa13.04□□□□□ -0.32
YIPF3-207ENST00000488966 CUL9Q8IWT3 2517 aa13.03□□□□□ -0.32
YIPF3-207ENST00000488966 CYP2D7A0A087X1C5 515 aa13.03□□□□□ -0.32
YIPF3-207ENST00000488966 FCER1AP12319 257 aa13.03□□□□□ -0.32
YIPF3-207ENST00000488966 ITGB8P26012 769 aa13.03□□□□□ -0.32
YIPF3-207ENST00000488966 TLE2Q04725 743 aa13.03□□□□□ -0.32
YIPF3-207ENST00000488966 ICA1Q05084 483 aa13.03□□□□□ -0.32
YIPF3-207ENST00000488966 TMEM132BQ14DG7 1078 aa13.03□□□□□ -0.32
YIPF3-207ENST00000488966 TTYH1Q9H313 450 aaPredicted RBP13.03□□□□□ -0.32
YIPF3-207ENST00000488966 ARHGEF10LQ9HCE6 1279 aa13.03□□□□□ -0.32
YIPF3-207ENST00000488966 PHF24Q9UPV7 400 aa13.03□□□□□ -0.32
YIPF3-207ENST00000488966 ZNF236Q9UL36 1845 aa13.02□□□□□ -0.32
YIPF3-207ENST00000488966 WDR46O15213 610 aaKnown RBP13.02□□□□□ -0.33
YIPF3-207ENST00000488966 PGK2P07205 417 aa13.02□□□□□ -0.33
YIPF3-207ENST00000488966 SMAD3P84022 425 aaKnown RBP13.02□□□□□ -0.33
YIPF3-207ENST00000488966 HSP90AB4PQ58FF6 505 aa13.02□□□□□ -0.33
YIPF3-207ENST00000488966 C1orf53Q5VUE5 145 aa13.02□□□□□ -0.33
YIPF3-207ENST00000488966 MAFAQ8NHW3 353 aaPredicted RBP13.02□□□□□ -0.33
YIPF3-207ENST00000488966 PANK1Q8TE04 598 aa13.02□□□□□ -0.33
YIPF3-207ENST00000488966 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.02□□□□□ -0.33
YIPF3-207ENST00000488966 FBXO28Q9NVF7 368 aa13.02□□□□□ -0.33
YIPF3-207ENST00000488966 ADAMTS5Q9UNA0 930 aa13.02□□□□□ -0.33
YIPF3-207ENST00000488966 APBB1O00213 710 aa13.01□□□□□ -0.33
YIPF3-207ENST00000488966 MBD4O95243 580 aa13.01□□□□□ -0.33
YIPF3-207ENST00000488966 SLC25A27O95847 323 aa13.01□□□□□ -0.33
YIPF3-207ENST00000488966 PGK1P00558 417 aa13.01□□□□□ -0.33
YIPF3-207ENST00000488966 CHGBP05060 677 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms