RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 THRAP3Q9Y2W1 955 aaKnown RBP14.45□□□□□ -0.1
CLIC4-202ENST00000488683 USP17L3A6NCW0 530 aa14.44□□□□□ -0.1
CLIC4-202ENST00000488683 USP17L4A6NCW7 530 aa14.44□□□□□ -0.1
CLIC4-202ENST00000488683 GOLGA8HP0CJ92 632 aa14.44□□□□□ -0.1
CLIC4-202ENST00000488683 USP17L1Q7RTZ2 530 aa14.44□□□□□ -0.1
CLIC4-202ENST00000488683 BRIP1Q9BX63 1249 aa14.44□□□□□ -0.1
CLIC4-202ENST00000488683 MRPL44Q9H9J2 332 aaKnown RBP14.44□□□□□ -0.1
CLIC4-202ENST00000488683 CGNQ9P2M7 1197 aaKnown RBP14.44□□□□□ -0.1
CLIC4-202ENST00000488683 CTNND2Q9UQB3 1225 aa14.44□□□□□ -0.1
CLIC4-202ENST00000488683 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.44□□□□□ -0.1
CLIC4-202ENST00000488683 SPATA31A5Q5VU36 1347 aa14.44□□□□□ -0.1
CLIC4-202ENST00000488683 SPATA31A7Q8IWB4 1347 aa14.44□□□□□ -0.1
CLIC4-202ENST00000488683 RNF225M0QZC1 329 aaPredicted RBP14.44□□□□□ -0.1
CLIC4-202ENST00000488683 GNG11P61952 73 aa14.44□□□□□ -0.1
CLIC4-202ENST00000488683 ETF1P62495 437 aaKnown RBP14.44□□□□□ -0.1
CLIC4-202ENST00000488683 CUL4BQ13620 913 aa14.44□□□□□ -0.1
CLIC4-202ENST00000488683 SPATA20Q8TB22 786 aa14.44□□□□□ -0.1
CLIC4-202ENST00000488683 ERO1AQ96HE7 468 aa14.44□□□□□ -0.1
CLIC4-202ENST00000488683 MTRQ99707 1265 aa14.44□□□□□ -0.1
CLIC4-202ENST00000488683 L2HGDHQ9H9P8 463 aa14.44□□□□□ -0.1
CLIC4-202ENST00000488683 DCP1AQ9NPI6 582 aaPredicted RBP14.44□□□□□ -0.1
CLIC4-202ENST00000488683 SAP30BPQ9UHR5 308 aaKnown RBP14.44□□□□□ -0.1
CLIC4-202ENST00000488683 DDX41Q9UJV9 622 aaKnown RBP14.44□□□□□ -0.1
CLIC4-202ENST00000488683 FAM205AQ6ZU69 1335 aa14.44□□□□□ -0.1
CLIC4-202ENST00000488683 PRPF3O43395 683 aaKnown RBP14.43□□□□□ -0.1
CLIC4-202ENST00000488683 RBL2Q08999 1139 aa14.43□□□□□ -0.1
CLIC4-202ENST00000488683 CLEC4GQ6UXB4 293 aa14.43□□□□□ -0.1
CLIC4-202ENST00000488683 DNAJC5Q9H3Z4 198 aa14.43□□□□□ -0.1
CLIC4-202ENST00000488683 MCM9Q9NXL9 1143 aa14.43□□□□□ -0.1
CLIC4-202ENST00000488683 KIF2AO00139 706 aaPredicted RBP14.43□□□□□ -0.1
CLIC4-202ENST00000488683 FGRP09769 529 aa14.43□□□□□ -0.1
CLIC4-202ENST00000488683 NLRP5P59047 1200 aa14.43□□□□□ -0.1
CLIC4-202ENST00000488683 DMTNQ08495 405 aa14.43□□□□□ -0.1
CLIC4-202ENST00000488683 TBX2Q13207 712 aaPredicted RBP14.43□□□□□ -0.1
CLIC4-202ENST00000488683 CCDC93Q567U6 631 aa14.43□□□□□ -0.1
CLIC4-202ENST00000488683 TTC38Q5R3I4 469 aa14.43□□□□□ -0.1
CLIC4-202ENST00000488683 TYW1BQ6NUM6 668 aa14.43□□□□□ -0.1
CLIC4-202ENST00000488683 IQCA1Q86XH1 822 aa14.43□□□□□ -0.1
CLIC4-202ENST00000488683 TNFRSF25Q93038 417 aa14.43□□□□□ -0.1
CLIC4-202ENST00000488683 HOOK1Q9UJC3 728 aaKnown RBP14.43□□□□□ -0.1
CLIC4-202ENST00000488683 TFR2Q9UP52 801 aa14.43□□□□□ -0.1
CLIC4-202ENST00000488683 CNTNAP5Q8WYK1 1306 aa14.43□□□□□ -0.1
CLIC4-202ENST00000488683 TSPY2A6NKD2 308 aa14.43□□□□□ -0.1
CLIC4-202ENST00000488683 TMTC3Q6ZXV5 915 aa14.43□□□□□ -0.1
CLIC4-202ENST00000488683 FBXO33Q7Z6M2 555 aa14.43□□□□□ -0.1
CLIC4-202ENST00000488683 MLKLQ8NB16 471 aa14.43□□□□□ -0.1
CLIC4-202ENST00000488683 ENOX1Q8TC92 643 aaKnown RBP14.43□□□□□ -0.1
CLIC4-202ENST00000488683 VPS16Q9H269 839 aa14.43□□□□□ -0.1
CLIC4-202ENST00000488683 CEP131Q9UPN4 1083 aa14.43□□□□□ -0.1
CLIC4-202ENST00000488683 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.43□□□□□ -0.1
CLIC4-202ENST00000488683 CLCN6P51797 869 aa14.42□□□□□ -0.1
CLIC4-202ENST00000488683 SPECC1LQ69YQ0 1117 aa14.42□□□□□ -0.1
CLIC4-202ENST00000488683 ZNF397Q8NF99 534 aaPredicted RBP14.42□□□□□ -0.1
CLIC4-202ENST00000488683 GDAQ9Y2T3 454 aa14.42□□□□□ -0.1
CLIC4-202ENST00000488683 XDHP47989 1333 aa14.42□□□□□ -0.1
CLIC4-202ENST00000488683 TRIM49BA6NDI0 452 aa14.42□□□□□ -0.1
CLIC4-202ENST00000488683 RAD9BQ6WBX8 426 aa14.42□□□□□ -0.1
CLIC4-202ENST00000488683 NBPF5PQ86XG9 351 aaPredicted RBP14.42□□□□□ -0.1
CLIC4-202ENST00000488683 UIMC1Q96RL1 719 aa14.42□□□□□ -0.1
CLIC4-202ENST00000488683 OGFRQ9NZT2 677 aa14.42□□□□□ -0.1
CLIC4-202ENST00000488683 PARP3Q9Y6F1 533 aa14.42□□□□□ -0.1
CLIC4-202ENST00000488683 LAMB1P07942 1786 aa14.41□□□□□ -0.1
CLIC4-202ENST00000488683 NRDCO43847 1150 aa14.41□□□□□ -0.1
CLIC4-202ENST00000488683 MYH8P13535 1937 aa14.41□□□□□ -0.1
CLIC4-202ENST00000488683 SYNRGQ9UMZ2 1314 aa14.41□□□□□ -0.1
CLIC4-202ENST00000488683 KIAA1551Q9HCM1 1747 aa14.41□□□□□ -0.1
CLIC4-202ENST00000488683 GNPATO15228 680 aa14.41□□□□□ -0.1
CLIC4-202ENST00000488683 CASP14P31944 242 aa14.41□□□□□ -0.1
CLIC4-202ENST00000488683 PLCD1P51178 756 aa14.41□□□□□ -0.1
CLIC4-202ENST00000488683 RPS8P62241 208 aaKnown RBP14.41□□□□□ -0.1
CLIC4-202ENST00000488683 NFIXQ14938 502 aa14.41□□□□□ -0.1
CLIC4-202ENST00000488683 PPP2R5BQ15173 497 aa14.41□□□□□ -0.1
CLIC4-202ENST00000488683 SLC35G1Q2M3R5 365 aa14.41□□□□□ -0.1
CLIC4-202ENST00000488683 APTXQ7Z2E3 356 aaKnown RBP14.41□□□□□ -0.1
CLIC4-202ENST00000488683 IL17RBQ9NRM6 502 aa14.41□□□□□ -0.1
CLIC4-202ENST00000488683 PPP1R3GB7ZBB8 358 aa14.4□□□□□ -0.1
CLIC4-202ENST00000488683 MYO1BO43795 1136 aa14.4□□□□□ -0.1
CLIC4-202ENST00000488683 XBP1P17861 261 aa14.4□□□□□ -0.1
CLIC4-202ENST00000488683 HIBADHP31937 336 aaKnown RBP14.4□□□□□ -0.1
CLIC4-202ENST00000488683 TFAP4Q01664 338 aa14.4□□□□□ -0.1
CLIC4-202ENST00000488683 NR1I3Q14994 352 aa14.4□□□□□ -0.1
CLIC4-202ENST00000488683 RCSD1Q6JBY9 416 aa14.4□□□□□ -0.1
CLIC4-202ENST00000488683 SH3RF1Q7Z6J0 888 aa14.4□□□□□ -0.1
CLIC4-202ENST00000488683 IGSF22Q8N9C0 903 aa14.4□□□□□ -0.1
CLIC4-202ENST00000488683 ACRBPQ8NEB7 543 aa14.4□□□□□ -0.1
CLIC4-202ENST00000488683 SH3RF3Q8TEJ3 882 aaPredicted RBP14.4□□□□□ -0.1
CLIC4-202ENST00000488683 ERCC3P19447 782 aa14.4□□□□□ -0.1
CLIC4-202ENST00000488683 FXR1P51114 621 aaKnown RBP eCLIP14.4□□□□□ -0.1
CLIC4-202ENST00000488683 TEX35Q5T0J7 233 aa14.4□□□□□ -0.1
CLIC4-202ENST00000488683 RRAGBQ5VZM2 374 aa14.4□□□□□ -0.1
CLIC4-202ENST00000488683 TRIML1Q8N9V2 468 aa14.4□□□□□ -0.1
CLIC4-202ENST00000488683 CTCFLQ8NI51 663 aaPredicted RBP14.4□□□□□ -0.1
CLIC4-202ENST00000488683 SMARCC1Q92922 1105 aaPredicted RBP14.4□□□□□ -0.1
CLIC4-202ENST00000488683 FEZ1Q99689 392 aa14.4□□□□□ -0.1
CLIC4-202ENST00000488683 RBM28Q9NW13 759 aaKnown RBP14.4□□□□□ -0.1
CLIC4-202ENST00000488683 TAB2Q9NYJ8 693 aa14.4□□□□□ -0.1
CLIC4-202ENST00000488683 PES1O00541 588 aaKnown RBP14.39□□□□□ -0.11
CLIC4-202ENST00000488683 SLFN14P0C7P3 912 aa14.39□□□□□ -0.11
CLIC4-202ENST00000488683 DHX8Q14562 1220 aaKnown RBP14.39□□□□□ -0.11
CLIC4-202ENST00000488683 MNS1Q8NEH6 495 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms