RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 WDR19Q8NEZ3 1342 aa14.18□□□□□ -0.14
HLA-DOB-209ENST00000488325 GPR75-ASB3A0A0A6YYF3 556 aa14.18□□□□□ -0.14
HLA-DOB-209ENST00000488325 TCP10L2B9ZVM9 353 aa14.18□□□□□ -0.14
HLA-DOB-209ENST00000488325 BCRP11274 1271 aa14.18□□□□□ -0.14
HLA-DOB-209ENST00000488325 PCP11498 1178 aaKnown RBP14.18□□□□□ -0.14
HLA-DOB-209ENST00000488325 CUL4AQ13619 759 aa14.18□□□□□ -0.14
HLA-DOB-209ENST00000488325 DIXDC1Q155Q3 683 aa14.18□□□□□ -0.14
HLA-DOB-209ENST00000488325 GRIK5Q16478 980 aa14.18□□□□□ -0.14
HLA-DOB-209ENST00000488325 NOL8Q76FK4 1167 aaKnown RBP14.18□□□□□ -0.14
HLA-DOB-209ENST00000488325 AMOTL1Q8IY63 956 aa14.18□□□□□ -0.14
HLA-DOB-209ENST00000488325 SPRYD3Q8NCJ5 442 aa14.18□□□□□ -0.14
HLA-DOB-209ENST00000488325 PXYLP1Q8TE99 480 aa14.18□□□□□ -0.14
HLA-DOB-209ENST00000488325 SDR42E1Q8WUS8 393 aa14.18□□□□□ -0.14
HLA-DOB-209ENST00000488325 ZKSCAN4Q969J2 545 aaPredicted RBP14.18□□□□□ -0.14
HLA-DOB-209ENST00000488325 WRNIP1Q96S55 665 aa14.18□□□□□ -0.14
HLA-DOB-209ENST00000488325 KRT23Q9C075 422 aa14.18□□□□□ -0.14
HLA-DOB-209ENST00000488325 NBPF3Q9H094 633 aa14.18□□□□□ -0.14
HLA-DOB-209ENST00000488325 SLKQ9H2G2 1235 aaPredicted RBP14.18□□□□□ -0.14
HLA-DOB-209ENST00000488325 CWC22Q9HCG8 908 aaKnown RBP14.18□□□□□ -0.14
HLA-DOB-209ENST00000488325 CIZ1Q9ULV3 898 aaPredicted RBP14.18□□□□□ -0.14
HLA-DOB-209ENST00000488325 TTF2Q9UNY4 1162 aaKnown RBP14.18□□□□□ -0.14
HLA-DOB-209ENST00000488325 MGAMO43451 1857 aa14.18□□□□□ -0.14
HLA-DOB-209ENST00000488325 TMEM265A0A087WTH1 108 aa14.17□□□□□ -0.14
HLA-DOB-209ENST00000488325 SLC3A2P08195 630 aaKnown RBP14.17□□□□□ -0.14
HLA-DOB-209ENST00000488325 MCM5P33992 734 aa14.17□□□□□ -0.14
HLA-DOB-209ENST00000488325 BTDP43251 543 aa14.17□□□□□ -0.14
HLA-DOB-209ENST00000488325 USP5P45974 858 aa14.17□□□□□ -0.14
HLA-DOB-209ENST00000488325 HDLBPQ00341 1268 aaKnown RBP14.17□□□□□ -0.14
HLA-DOB-209ENST00000488325 PPARAQ07869 468 aa14.17□□□□□ -0.14
HLA-DOB-209ENST00000488325 AKNAD1Q5T1N1 836 aa14.17□□□□□ -0.14
HLA-DOB-209ENST00000488325 MFSD6Q6ZSS7 791 aa14.17□□□□□ -0.14
HLA-DOB-209ENST00000488325 STAG1Q8WVM7 1258 aa14.17□□□□□ -0.14
HLA-DOB-209ENST00000488325 INTS4Q96HW7 963 aaKnown RBP14.17□□□□□ -0.14
HLA-DOB-209ENST00000488325 MRIQ9BWK5 157 aa14.17□□□□□ -0.14
HLA-DOB-209ENST00000488325 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.17□□□□□ -0.14
HLA-DOB-209ENST00000488325 CHMP5Q9NZZ3 219 aa14.17□□□□□ -0.14
HLA-DOB-209ENST00000488325 ARPP21Q9UBL0 812 aaPredicted RBP14.17□□□□□ -0.14
HLA-DOB-209ENST00000488325 ANAPC4Q9UJX5 808 aa14.17□□□□□ -0.14
HLA-DOB-209ENST00000488325 MYH2Q9UKX2 1941 aa14.16□□□□□ -0.14
HLA-DOB-209ENST00000488325 NT5C2P49902 561 aa14.16□□□□□ -0.14
HLA-DOB-209ENST00000488325 MDM2Q00987 491 aaPredicted RBP14.16□□□□□ -0.14
HLA-DOB-209ENST00000488325 EXOSC10Q01780 885 aaKnown RBP14.16□□□□□ -0.14
HLA-DOB-209ENST00000488325 IRF5Q13568 498 aa14.16□□□□□ -0.14
HLA-DOB-209ENST00000488325 SBK1Q52WX2 424 aa14.16□□□□□ -0.14
HLA-DOB-209ENST00000488325 HHIPL2Q6UWX4 724 aa14.16□□□□□ -0.14
HLA-DOB-209ENST00000488325 Q6ZUG5 572 aa14.16□□□□□ -0.14
HLA-DOB-209ENST00000488325 TBC1D10CQ8IV04 446 aa14.16□□□□□ -0.14
HLA-DOB-209ENST00000488325 MB21D2Q8IYB1 491 aaPredicted RBP14.16□□□□□ -0.14
HLA-DOB-209ENST00000488325 TEKT1Q969V4 418 aa14.16□□□□□ -0.14
HLA-DOB-209ENST00000488325 CHMP4CQ96CF2 233 aa14.16□□□□□ -0.14
HLA-DOB-209ENST00000488325 C11orf49Q9H6J7 331 aa14.16□□□□□ -0.14
HLA-DOB-209ENST00000488325 DCP1AQ9NPI6 582 aaPredicted RBP14.16□□□□□ -0.14
HLA-DOB-209ENST00000488325 DAGLAQ9Y4D2 1042 aa14.16□□□□□ -0.14
HLA-DOB-209ENST00000488325 MINDY4BA8MYZ0 360 aa14.15□□□□□ -0.14
HLA-DOB-209ENST00000488325 TNNI2P48788 182 aa14.15□□□□□ -0.14
HLA-DOB-209ENST00000488325 PPATQ06203 517 aa14.15□□□□□ -0.14
HLA-DOB-209ENST00000488325 TJAP1Q5JTD0 557 aa14.15□□□□□ -0.14
HLA-DOB-209ENST00000488325 TEX11Q8IYF3 940 aa14.15□□□□□ -0.14
HLA-DOB-209ENST00000488325 FBXL16Q8N461 479 aa14.15□□□□□ -0.14
HLA-DOB-209ENST00000488325 SH3RF3Q8TEJ3 882 aaPredicted RBP14.15□□□□□ -0.14
HLA-DOB-209ENST00000488325 PARK7Q99497 189 aaKnown RBP14.15□□□□□ -0.14
HLA-DOB-209ENST00000488325 MTA3Q9BTC8 594 aa14.15□□□□□ -0.14
HLA-DOB-209ENST00000488325 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.15□□□□□ -0.14
HLA-DOB-209ENST00000488325 PRC1O43663 620 aa14.14□□□□□ -0.15
HLA-DOB-209ENST00000488325 NPM3O75607 178 aaKnown RBP14.14□□□□□ -0.15
HLA-DOB-209ENST00000488325 CYP2C8P10632 490 aa14.14□□□□□ -0.15
HLA-DOB-209ENST00000488325 CTDSPL2Q05D32 466 aa14.14□□□□□ -0.15
HLA-DOB-209ENST00000488325 TOB2Q14106 344 aaPredicted RBP14.14□□□□□ -0.15
HLA-DOB-209ENST00000488325 MYLIPQ8WY64 445 aa14.14□□□□□ -0.15
HLA-DOB-209ENST00000488325 TMEM87BQ96K49 555 aa14.14□□□□□ -0.15
HLA-DOB-209ENST00000488325 TCEANC2Q96MN5 208 aa14.14□□□□□ -0.15
HLA-DOB-209ENST00000488325 AGXT2Q9BYV1 514 aa14.14□□□□□ -0.15
HLA-DOB-209ENST00000488325 TOMM22Q9NS69 142 aa14.14□□□□□ -0.15
HLA-DOB-209ENST00000488325 FOXD4L1Q9NU39 408 aa14.14□□□□□ -0.15
HLA-DOB-209ENST00000488325 TAOK2Q9UL54 1235 aa14.14□□□□□ -0.15
HLA-DOB-209ENST00000488325 DDX60LQ5H9U9 1706 aaKnown RBP14.14□□□□□ -0.15
HLA-DOB-209ENST00000488325 USP17L12C9JPN9 530 aa14.13□□□□□ -0.15
HLA-DOB-209ENST00000488325 USP17L21D6R901 530 aa14.13□□□□□ -0.15
HLA-DOB-209ENST00000488325 TNPO2O14787 897 aaKnown RBP14.13□□□□□ -0.15
HLA-DOB-209ENST00000488325 CRKP46108 304 aa14.13□□□□□ -0.15
HLA-DOB-209ENST00000488325 MOGSQ13724 837 aa14.13□□□□□ -0.15
HLA-DOB-209ENST00000488325 CTR9Q6PD62 1173 aa14.13□□□□□ -0.15
HLA-DOB-209ENST00000488325 TGFBRAP1Q8WUH2 860 aa14.13□□□□□ -0.15
HLA-DOB-209ENST00000488325 SEMA6BQ9H3T3 888 aa14.13□□□□□ -0.15
HLA-DOB-209ENST00000488325 MCM9Q9NXL9 1143 aa14.13□□□□□ -0.15
HLA-DOB-209ENST00000488325 SERPINA10Q9UK55 444 aa14.13□□□□□ -0.15
HLA-DOB-209ENST00000488325 KCNH4Q9UQ05 1017 aa14.13□□□□□ -0.15
HLA-DOB-209ENST00000488325 NEDD4P46934 1319 aa14.13□□□□□ -0.15
HLA-DOB-209ENST00000488325 CDH23Q9H251 3354 aa14.12□□□□□ -0.15
HLA-DOB-209ENST00000488325 B4E1Z4 1266 aa14.12□□□□□ -0.15
HLA-DOB-209ENST00000488325 POLR3DP05423 398 aaPredicted RBP14.12□□□□□ -0.15
HLA-DOB-209ENST00000488325 RHBDL3P58872 404 aa14.12□□□□□ -0.15
HLA-DOB-209ENST00000488325 PDE4BQ07343 736 aa14.12□□□□□ -0.15
HLA-DOB-209ENST00000488325 SART3Q15020 963 aaKnown RBP14.12□□□□□ -0.15
HLA-DOB-209ENST00000488325 ESR2Q92731 530 aa14.12□□□□□ -0.15
HLA-DOB-209ENST00000488325 BRF1Q92994 677 aa14.12□□□□□ -0.15
HLA-DOB-209ENST00000488325 ZDHHC15Q96MV8 337 aa14.12□□□□□ -0.15
HLA-DOB-209ENST00000488325 TPCN1Q9ULQ1 816 aa14.12□□□□□ -0.15
HLA-DOB-209ENST00000488325 PFASO15067 1338 aa14.12□□□□□ -0.15
HLA-DOB-209ENST00000488325 FOSL2P15408 326 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms