RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 DGKZQ13574 1117 aa18.52■□□□□ 0.56
C9orf3-219ENST00000488186 MOGSQ13724 837 aa18.52■□□□□ 0.56
C9orf3-219ENST00000488186 SART3Q15020 963 aaKnown RBP18.52■□□□□ 0.56
C9orf3-219ENST00000488186 SIAH1Q8IUQ4 282 aa18.52■□□□□ 0.56
C9orf3-219ENST00000488186 USP26Q9BXU7 913 aa18.52■□□□□ 0.56
C9orf3-219ENST00000488186 VCPKMTQ9H867 229 aa18.52■□□□□ 0.56
C9orf3-219ENST00000488186 ZFYVE28Q9HCC9 887 aa18.52■□□□□ 0.56
C9orf3-219ENST00000488186 IL17RBQ9NRM6 502 aa18.52■□□□□ 0.56
C9orf3-219ENST00000488186 ISY1Q9ULR0 285 aaKnown RBP18.52■□□□□ 0.56
C9orf3-219ENST00000488186 CASP8AP2Q9UKL3 1982 aa18.51■□□□□ 0.55
C9orf3-219ENST00000488186 IRX3P78415 501 aaPredicted RBP18.51■□□□□ 0.55
C9orf3-219ENST00000488186 TREML2Q5T2D2 321 aa18.51■□□□□ 0.55
C9orf3-219ENST00000488186 GPAT2Q6NUI2 795 aa18.51■□□□□ 0.55
C9orf3-219ENST00000488186 SPICE1Q8N0Z3 855 aa18.51■□□□□ 0.55
C9orf3-219ENST00000488186 LPAR1Q92633 364 aa18.51■□□□□ 0.55
C9orf3-219ENST00000488186 MKL1Q969V6 931 aa18.51■□□□□ 0.55
C9orf3-219ENST00000488186 TTC14Q96N46 770 aa18.51■□□□□ 0.55
C9orf3-219ENST00000488186 ZSCAN10Q96SZ4 725 aaPredicted RBP18.51■□□□□ 0.55
C9orf3-219ENST00000488186 PARK7Q99497 189 aaKnown RBP18.51■□□□□ 0.55
C9orf3-219ENST00000488186 LAMA4Q16363 1823 aa18.51■□□□□ 0.55
C9orf3-219ENST00000488186 USP17L15C9J2P7 530 aa18.5■□□□□ 0.55
C9orf3-219ENST00000488186 USP17L13C9JLJ4 530 aa18.5■□□□□ 0.55
C9orf3-219ENST00000488186 USP17L11C9JVI0 530 aa18.5■□□□□ 0.55
C9orf3-219ENST00000488186 USP17L18D6R9N7 530 aa18.5■□□□□ 0.55
C9orf3-219ENST00000488186 USP17L22D6RA61 530 aa18.5■□□□□ 0.55
C9orf3-219ENST00000488186 USP17L17D6RBQ6 530 aa18.5■□□□□ 0.55
C9orf3-219ENST00000488186 USP17L19D6RCP7 530 aa18.5■□□□□ 0.55
C9orf3-219ENST00000488186 USP17L20D6RJB6 530 aa18.5■□□□□ 0.55
C9orf3-219ENST00000488186 TBC1D8O95759 1140 aa18.5■□□□□ 0.55
C9orf3-219ENST00000488186 HSPA4P34932 840 aa18.5■□□□□ 0.55
C9orf3-219ENST00000488186 USP17L24Q0WX57 530 aa18.5■□□□□ 0.55
C9orf3-219ENST00000488186 LRRC47Q8N1G4 583 aaKnown RBP18.5■□□□□ 0.55
C9orf3-219ENST00000488186 SMCR8Q8TEV9 937 aaPredicted RBP18.5■□□□□ 0.55
C9orf3-219ENST00000488186 C12orf42Q96LP6 360 aa18.5■□□□□ 0.55
C9orf3-219ENST00000488186 NEK1Q96PY6 1258 aa18.5■□□□□ 0.55
C9orf3-219ENST00000488186 MTMR7Q9Y216 660 aa18.5■□□□□ 0.55
C9orf3-219ENST00000488186 TAF6LQ9Y6J9 622 aa18.5■□□□□ 0.55
C9orf3-219ENST00000488186 LOC285556D6RIA3 1793 aa18.5■□□□□ 0.55
C9orf3-219ENST00000488186 F5H6K3 240 aa18.49■□□□□ 0.55
C9orf3-219ENST00000488186 IFIT3O14879 490 aaKnown RBP18.49■□□□□ 0.55
C9orf3-219ENST00000488186 TOP1P11387 765 aaKnown RBP18.49■□□□□ 0.55
C9orf3-219ENST00000488186 VCAM1P19320 739 aa18.49■□□□□ 0.55
C9orf3-219ENST00000488186 MCM5P33992 734 aa18.49■□□□□ 0.55
C9orf3-219ENST00000488186 KLRC3Q07444 240 aa18.49■□□□□ 0.55
C9orf3-219ENST00000488186 STOX1Q6ZVD7 989 aa18.49■□□□□ 0.55
C9orf3-219ENST00000488186 DGKHQ86XP1 1220 aa18.49■□□□□ 0.55
C9orf3-219ENST00000488186 TANGO6Q9C0B7 1094 aa18.49■□□□□ 0.55
C9orf3-219ENST00000488186 RPAP3Q9H6T3 665 aaPredicted RBP18.49■□□□□ 0.55
C9orf3-219ENST00000488186 KAT14Q9H8E8 782 aa18.49■□□□□ 0.55
C9orf3-219ENST00000488186 SYNPO2Q9UMS6 1093 aa18.49■□□□□ 0.55
C9orf3-219ENST00000488186 TNKSO95271 1327 aa18.49■□□□□ 0.55
C9orf3-219ENST00000488186 GPR25O00155 361 aa18.48■□□□□ 0.55
C9orf3-219ENST00000488186 HMGB1P09429 215 aaKnown RBP18.48■□□□□ 0.55
C9orf3-219ENST00000488186 PSMA5P28066 241 aa18.48■□□□□ 0.55
C9orf3-219ENST00000488186 TSGA10IPQ3SY00 556 aa18.48■□□□□ 0.55
C9orf3-219ENST00000488186 IFIT1BQ5T764 474 aaKnown RBP18.48■□□□□ 0.55
C9orf3-219ENST00000488186 SLFN13Q68D06 897 aa18.48■□□□□ 0.55
C9orf3-219ENST00000488186 CYB5R4Q7L1T6 521 aa18.48■□□□□ 0.55
C9orf3-219ENST00000488186 CHST3Q7LGC8 479 aa18.48■□□□□ 0.55
C9orf3-219ENST00000488186 RASEFQ8IZ41 740 aa18.48■□□□□ 0.55
C9orf3-219ENST00000488186 TMEM47Q9BQJ4 181 aa18.48■□□□□ 0.55
C9orf3-219ENST00000488186 TSKSQ9UJT2 592 aa18.48■□□□□ 0.55
C9orf3-219ENST00000488186 WDR46O15213 610 aaKnown RBP18.47■□□□□ 0.55
C9orf3-219ENST00000488186 PRC1O43663 620 aa18.47■□□□□ 0.55
C9orf3-219ENST00000488186 CYP2C8P10632 490 aa18.47■□□□□ 0.55
C9orf3-219ENST00000488186 HOXA7P31268 230 aaPredicted RBP18.47■□□□□ 0.55
C9orf3-219ENST00000488186 CRHR2Q13324 411 aa18.47■□□□□ 0.55
C9orf3-219ENST00000488186 SAMD1Q6SPF0 538 aaPredicted RBP18.47■□□□□ 0.55
C9orf3-219ENST00000488186 CATSPERGQ6ZRH7 1159 aa18.47■□□□□ 0.55
C9orf3-219ENST00000488186 NKX2-3Q8TAU0 364 aa18.47■□□□□ 0.55
C9orf3-219ENST00000488186 CHMP4CQ96CF2 233 aa18.47■□□□□ 0.55
C9orf3-219ENST00000488186 JAKMIP1Q96N16 626 aaKnown RBP18.47■□□□□ 0.55
C9orf3-219ENST00000488186 ASCC2Q9H1I8 757 aaPredicted RBP18.47■□□□□ 0.55
C9orf3-219ENST00000488186 SNX14Q9Y5W7 946 aa18.47■□□□□ 0.55
C9orf3-219ENST00000488186 TLR2O60603 784 aa18.46■□□□□ 0.55
C9orf3-219ENST00000488186 NDUFB10O96000 172 aa18.46■□□□□ 0.55
C9orf3-219ENST00000488186 SLC1A4P43007 532 aa18.46■□□□□ 0.55
C9orf3-219ENST00000488186 FGD1P98174 961 aa18.46■□□□□ 0.55
C9orf3-219ENST00000488186 WTAPQ15007 396 aa18.46■□□□□ 0.55
C9orf3-219ENST00000488186 C8orf34Q49A92 452 aa18.46■□□□□ 0.55
C9orf3-219ENST00000488186 TMEM67Q5HYA8 995 aa18.46■□□□□ 0.55
C9orf3-219ENST00000488186 FAM83BQ5T0W9 1011 aa18.46■□□□□ 0.55
C9orf3-219ENST00000488186 MB21D2Q8IYB1 491 aaPredicted RBP18.46■□□□□ 0.55
C9orf3-219ENST00000488186 GMCL1P1Q8NEA9 526 aa18.46■□□□□ 0.55
C9orf3-219ENST00000488186 UPF2Q9HAU5 1272 aaKnown RBP18.46■□□□□ 0.55
C9orf3-219ENST00000488186 HOXC10Q9NYD6 342 aa18.46■□□□□ 0.55
C9orf3-219ENST00000488186 GREB1LQ9C091 1923 aaPredicted RBP18.46■□□□□ 0.55
C9orf3-219ENST00000488186 FLOT1O75955 427 aa18.45■□□□□ 0.54
C9orf3-219ENST00000488186 BMP3P12645 472 aa18.45■□□□□ 0.54
C9orf3-219ENST00000488186 NOVP48745 357 aa18.45■□□□□ 0.54
C9orf3-219ENST00000488186 IKQ13123 557 aaPredicted RBP18.45■□□□□ 0.54
C9orf3-219ENST00000488186 COG2Q14746 738 aa18.45■□□□□ 0.54
C9orf3-219ENST00000488186 CCDC96Q2M329 555 aa18.45■□□□□ 0.54
C9orf3-219ENST00000488186 KIAA1755Q5JYT7 1200 aa18.45■□□□□ 0.54
C9orf3-219ENST00000488186 NFXL1Q6ZNB6 911 aa18.45■□□□□ 0.54
C9orf3-219ENST00000488186 ENAHQ8N8S7 591 aaPredicted RBP18.45■□□□□ 0.54
C9orf3-219ENST00000488186 KCNB2Q92953 911 aa18.45■□□□□ 0.54
C9orf3-219ENST00000488186 P2RX7Q99572 595 aaKnown RBP18.45■□□□□ 0.54
C9orf3-219ENST00000488186 FKTNO75072 461 aa18.44■□□□□ 0.54
C9orf3-219ENST00000488186 SEC24BO95487 1268 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms