RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 CCL14Q16627 93 aa13.57□□□□□ -0.24
NIPAL3-207ENST00000488155 ARHGEF10LQ9HCE6 1279 aa13.57□□□□□ -0.24
NIPAL3-207ENST00000488155 HMX1Q9NP08 348 aaPredicted RBP13.57□□□□□ -0.24
NIPAL3-207ENST00000488155 MCM3APO60318 1980 aa13.56□□□□□ -0.24
NIPAL3-207ENST00000488155 M0R2C6 588 aa13.56□□□□□ -0.24
NIPAL3-207ENST00000488155 PRKAR2AP13861 404 aaKnown RBP13.56□□□□□ -0.24
NIPAL3-207ENST00000488155 RGS2P41220 211 aa13.56□□□□□ -0.24
NIPAL3-207ENST00000488155 CCNA1P78396 465 aa13.56□□□□□ -0.24
NIPAL3-207ENST00000488155 C16orf86Q6ZW13 317 aa13.56□□□□□ -0.24
NIPAL3-207ENST00000488155 UBE2Q1Q7Z7E8 422 aa13.56□□□□□ -0.24
NIPAL3-207ENST00000488155 SIAH1Q8IUQ4 282 aa13.56□□□□□ -0.24
NIPAL3-207ENST00000488155 DIS3LQ8TF46 1054 aaKnown RBP13.56□□□□□ -0.24
NIPAL3-207ENST00000488155 SOCS4Q8WXH5 440 aa13.56□□□□□ -0.24
NIPAL3-207ENST00000488155 APPBP2Q92624 585 aa13.56□□□□□ -0.24
NIPAL3-207ENST00000488155 GCC1Q96CN9 775 aa13.56□□□□□ -0.24
NIPAL3-207ENST00000488155 PAWRQ96IZ0 340 aaKnown RBP13.56□□□□□ -0.24
NIPAL3-207ENST00000488155 RPTORQ8N122 1335 aa13.56□□□□□ -0.24
NIPAL3-207ENST00000488155 GSG1L2A8MUP6 293 aa13.55□□□□□ -0.24
NIPAL3-207ENST00000488155 GPAA1O43292 621 aa13.55□□□□□ -0.24
NIPAL3-207ENST00000488155 APPP05067 770 aa13.55□□□□□ -0.24
NIPAL3-207ENST00000488155 EEF2P13639 858 aaKnown RBP13.55□□□□□ -0.24
NIPAL3-207ENST00000488155 ZKSCAN1P17029 563 aaPredicted RBP13.55□□□□□ -0.24
NIPAL3-207ENST00000488155 PLS1Q14651 629 aa13.55□□□□□ -0.24
NIPAL3-207ENST00000488155 COG2Q14746 738 aa13.55□□□□□ -0.24
NIPAL3-207ENST00000488155 HABP4Q5JVS0 413 aaKnown RBP13.55□□□□□ -0.24
NIPAL3-207ENST00000488155 MORN1Q5T089 497 aa13.55□□□□□ -0.24
NIPAL3-207ENST00000488155 ANKRD45Q5TZF3 282 aa13.55□□□□□ -0.24
NIPAL3-207ENST00000488155 PI4K2BQ8TCG2 481 aa13.55□□□□□ -0.24
NIPAL3-207ENST00000488155 USP6NLQ92738 828 aa13.55□□□□□ -0.24
NIPAL3-207ENST00000488155 CCDC17Q96LX7 622 aa13.55□□□□□ -0.24
NIPAL3-207ENST00000488155 SEC62Q99442 399 aaKnown RBP13.55□□□□□ -0.24
NIPAL3-207ENST00000488155 FSD1Q9BTV5 496 aa13.55□□□□□ -0.24
NIPAL3-207ENST00000488155 HTATIP2Q9BUP3 242 aa13.55□□□□□ -0.24
NIPAL3-207ENST00000488155 ARPP21Q9UBL0 812 aaPredicted RBP13.55□□□□□ -0.24
NIPAL3-207ENST00000488155 COLQQ9Y215 455 aaPredicted RBP13.55□□□□□ -0.24
NIPAL3-207ENST00000488155 A0A0G2JMZ2 1700 aa13.55□□□□□ -0.24
NIPAL3-207ENST00000488155 ERC2O15083 957 aa13.54□□□□□ -0.24
NIPAL3-207ENST00000488155 FLOT1O75955 427 aa13.54□□□□□ -0.24
NIPAL3-207ENST00000488155 CCND3P30281 292 aaPredicted RBP13.54□□□□□ -0.24
NIPAL3-207ENST00000488155 TDO2P48775 406 aa13.54□□□□□ -0.24
NIPAL3-207ENST00000488155 CACNB2Q08289 660 aaPredicted RBP13.54□□□□□ -0.24
NIPAL3-207ENST00000488155 MAP2K5Q13163 448 aa13.54□□□□□ -0.24
NIPAL3-207ENST00000488155 CRISPLD2Q9H0B8 497 aa13.54□□□□□ -0.24
NIPAL3-207ENST00000488155 VCPKMTQ9H867 229 aa13.54□□□□□ -0.24
NIPAL3-207ENST00000488155 MKNK2Q9HBH9 465 aa13.54□□□□□ -0.24
NIPAL3-207ENST00000488155 EPB41L4AQ9HCS5 686 aaPredicted RBP13.54□□□□□ -0.24
NIPAL3-207ENST00000488155 ZBTB47Q9UFB7 747 aaPredicted RBP13.54□□□□□ -0.24
NIPAL3-207ENST00000488155 TMX2Q9Y320 296 aa13.54□□□□□ -0.24
NIPAL3-207ENST00000488155 IVNS1ABPQ9Y6Y0 642 aa13.54□□□□□ -0.24
NIPAL3-207ENST00000488155 TTC41PQ6P2S7 1318 aa13.54□□□□□ -0.24
NIPAL3-207ENST00000488155 PRDM1O75626 825 aa13.53□□□□□ -0.24
NIPAL3-207ENST00000488155 GLRX3O76003 335 aaKnown RBP13.53□□□□□ -0.24
NIPAL3-207ENST00000488155 ZFYP08048 801 aaPredicted RBP13.53□□□□□ -0.24
NIPAL3-207ENST00000488155 XRCC5P13010 732 aaKnown RBP13.53□□□□□ -0.24
NIPAL3-207ENST00000488155 MX1P20591 662 aa13.53□□□□□ -0.24
NIPAL3-207ENST00000488155 PTPREP23469 700 aa13.53□□□□□ -0.24
NIPAL3-207ENST00000488155 DSG3P32926 999 aa13.53□□□□□ -0.24
NIPAL3-207ENST00000488155 LBX2Q6XYB7 198 aa13.53□□□□□ -0.24
NIPAL3-207ENST00000488155 NPLOC4Q8TAT6 608 aa13.53□□□□□ -0.24
NIPAL3-207ENST00000488155 ATG4CQ96DT6 458 aa13.53□□□□□ -0.24
NIPAL3-207ENST00000488155 APBA2Q99767 749 aa13.53□□□□□ -0.24
NIPAL3-207ENST00000488155 MOV10L1Q9BXT6 1211 aaKnown RBP13.53□□□□□ -0.24
NIPAL3-207ENST00000488155 SH2D4AQ9H788 454 aa13.53□□□□□ -0.24
NIPAL3-207ENST00000488155 FBXO28Q9NVF7 368 aa13.53□□□□□ -0.24
NIPAL3-207ENST00000488155 HOXC10Q9NYD6 342 aa13.53□□□□□ -0.24
NIPAL3-207ENST00000488155 FLRT1Q9NZU1 646 aa13.53□□□□□ -0.24
NIPAL3-207ENST00000488155 SLC15A5A6NIM6 579 aa13.52□□□□□ -0.25
NIPAL3-207ENST00000488155 SBK1Q52WX2 424 aa13.52□□□□□ -0.25
NIPAL3-207ENST00000488155 CHRDL2Q6WN34 429 aa13.52□□□□□ -0.25
NIPAL3-207ENST00000488155 NECAB2Q7Z6G3 386 aa13.52□□□□□ -0.25
NIPAL3-207ENST00000488155 IFNL3Q8IZI9 196 aa13.52□□□□□ -0.25
NIPAL3-207ENST00000488155 LPAR1Q92633 364 aa13.52□□□□□ -0.25
NIPAL3-207ENST00000488155 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.52□□□□□ -0.25
NIPAL3-207ENST00000488155 SPATC1LQ9H0A9 340 aa13.52□□□□□ -0.25
NIPAL3-207ENST00000488155 KANSL2Q9H9L4 492 aa13.52□□□□□ -0.25
NIPAL3-207ENST00000488155 WDR46O15213 610 aaKnown RBP13.51□□□□□ -0.25
NIPAL3-207ENST00000488155 EVI5O60447 810 aa13.51□□□□□ -0.25
NIPAL3-207ENST00000488155 ERCC3P19447 782 aa13.51□□□□□ -0.25
NIPAL3-207ENST00000488155 RASA1P20936 1047 aa13.51□□□□□ -0.25
NIPAL3-207ENST00000488155 GRB14Q14449 540 aa13.51□□□□□ -0.25
NIPAL3-207ENST00000488155 FAM83BQ5T0W9 1011 aa13.51□□□□□ -0.25
NIPAL3-207ENST00000488155 MAP3K21Q5TCX8 1036 aa13.51□□□□□ -0.25
NIPAL3-207ENST00000488155 CCDC129Q6ZRS4 1044 aa13.51□□□□□ -0.25
NIPAL3-207ENST00000488155 DPP9Q86TI2 863 aa13.51□□□□□ -0.25
NIPAL3-207ENST00000488155 NCAPG2Q86XI2 1143 aa13.51□□□□□ -0.25
NIPAL3-207ENST00000488155 TRMT44Q8IYL2 757 aaKnown RBP13.51□□□□□ -0.25
NIPAL3-207ENST00000488155 NUP88Q99567 741 aaPredicted RBP13.51□□□□□ -0.25
NIPAL3-207ENST00000488155 NR2E3Q9Y5X4 410 aa13.51□□□□□ -0.25
NIPAL3-207ENST00000488155 PATL2C9JE40 543 aaKnown RBP13.5□□□□□ -0.25
NIPAL3-207ENST00000488155 GNAT2P19087 354 aa13.5□□□□□ -0.25
NIPAL3-207ENST00000488155 ADORA2AP29274 412 aa13.5□□□□□ -0.25
NIPAL3-207ENST00000488155 CNGA1P29973 690 aa13.5□□□□□ -0.25
NIPAL3-207ENST00000488155 CYP2C19P33261 490 aa13.5□□□□□ -0.25
NIPAL3-207ENST00000488155 LRRFIP1Q32MZ4 808 aaKnown RBP13.5□□□□□ -0.25
NIPAL3-207ENST00000488155 ZMYM1Q5SVZ6 1142 aa13.5□□□□□ -0.25
NIPAL3-207ENST00000488155 MFSD14CQ5VZR4 134 aa13.5□□□□□ -0.25
NIPAL3-207ENST00000488155 GIMAP6Q6P9H5 292 aa13.5□□□□□ -0.25
NIPAL3-207ENST00000488155 ZNF444Q8N0Y2 327 aaPredicted RBP13.5□□□□□ -0.25
NIPAL3-207ENST00000488155 CHMP4CQ96CF2 233 aa13.5□□□□□ -0.25
NIPAL3-207ENST00000488155 GOPCQ9HD26 462 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms