RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 MYPNQ86TC9 1320 aa28.16■■■□□ 2.1
RHBDD3-205ENST00000488106 ALX1Q15699 326 aa28.15■■■□□ 2.1
RHBDD3-205ENST00000488106 CATSPERGQ6ZRH7 1159 aa28.15■■■□□ 2.1
RHBDD3-205ENST00000488106 TANGO6Q9C0B7 1094 aa28.15■■■□□ 2.1
RHBDD3-205ENST00000488106 TNPO2O14787 897 aaKnown RBP28.14■■■□□ 2.1
RHBDD3-205ENST00000488106 RAD21O60216 631 aa28.14■■■□□ 2.1
RHBDD3-205ENST00000488106 FGAP02671 866 aa28.14■■■□□ 2.1
RHBDD3-205ENST00000488106 NEFLP07196 543 aa28.14■■■□□ 2.1
RHBDD3-205ENST00000488106 VCPKMTQ9H867 229 aa28.14■■■□□ 2.1
RHBDD3-205ENST00000488106 TXNRD2Q9NNW7 524 aa28.14■■■□□ 2.1
RHBDD3-205ENST00000488106 SRRDQ9UH36 339 aa28.14■■■□□ 2.1
RHBDD3-205ENST00000488106 ZMYM6O95789 1325 aa28.14■■■□□ 2.09
RHBDD3-205ENST00000488106 PLIN4Q96Q06 1357 aa28.13■■■□□ 2.09
RHBDD3-205ENST00000488106 TSPY3P0CV98 308 aa28.13■■■□□ 2.09
RHBDD3-205ENST00000488106 TSPY8P0CW00 308 aa28.13■■■□□ 2.09
RHBDD3-205ENST00000488106 HOXD10P28358 340 aa28.13■■■□□ 2.09
RHBDD3-205ENST00000488106 SOX10P56693 466 aa28.13■■■□□ 2.09
RHBDD3-205ENST00000488106 PRKCZQ05513 592 aa28.13■■■□□ 2.09
RHBDD3-205ENST00000488106 FAM47AQ5JRC9 791 aa28.13■■■□□ 2.09
RHBDD3-205ENST00000488106 INCENPQ9NQS7 918 aa28.13■■■□□ 2.09
RHBDD3-205ENST00000488106 MORF4L1Q9UBU8 362 aa28.13■■■□□ 2.09
RHBDD3-205ENST00000488106 ZNFX1Q9P2E3 1918 aaKnown RBP28.13■■■□□ 2.09
RHBDD3-205ENST00000488106 HAND2P61296 217 aa28.12■■■□□ 2.09
RHBDD3-205ENST00000488106 SLC9C1Q4G0N8 1177 aa28.12■■■□□ 2.09
RHBDD3-205ENST00000488106 SKAP1Q86WV1 359 aa28.12■■■□□ 2.09
RHBDD3-205ENST00000488106 GTF3C2Q8WUA4 911 aaPredicted RBP28.12■■■□□ 2.09
RHBDD3-205ENST00000488106 LPAR1Q92633 364 aa28.12■■■□□ 2.09
RHBDD3-205ENST00000488106 GOPCQ9HD26 462 aa28.12■■■□□ 2.09
RHBDD3-205ENST00000488106 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.12■■■□□ 2.09
RHBDD3-205ENST00000488106 PRMT2P55345 433 aa28.11■■■□□ 2.09
RHBDD3-205ENST00000488106 CEP95Q96GE4 821 aa28.11■■■□□ 2.09
RHBDD3-205ENST00000488106 RBPJLQ9UBG7 517 aa28.11■■■□□ 2.09
RHBDD3-205ENST00000488106 ANAPC4Q9UJX5 808 aa28.11■■■□□ 2.09
RHBDD3-205ENST00000488106 GABRQQ9UN88 632 aa28.11■■■□□ 2.09
RHBDD3-205ENST00000488106 IGKV6D-41A0A0C4DH26 115 aa28.1■■■□□ 2.09
RHBDD3-205ENST00000488106 SPDYE16A6NNV3 312 aaPredicted RBP28.1■■■□□ 2.09
RHBDD3-205ENST00000488106 ERVK-9P63128 1117 aa28.1■■■□□ 2.09
RHBDD3-205ENST00000488106 ERVK-24P63145 666 aa28.1■■■□□ 2.09
RHBDD3-205ENST00000488106 TFAP4Q01664 338 aa28.1■■■□□ 2.09
RHBDD3-205ENST00000488106 POTEEQ6S8J3 1075 aa28.1■■■□□ 2.09
RHBDD3-205ENST00000488106 GPRC5AQ8NFJ5 357 aa28.1■■■□□ 2.09
RHBDD3-205ENST00000488106 RAET1EQ8TD07 263 aa28.1■■■□□ 2.09
RHBDD3-205ENST00000488106 TOMM22Q9NS69 142 aa28.1■■■□□ 2.09
RHBDD3-205ENST00000488106 TACC3Q9Y6A5 838 aa28.1■■■□□ 2.09
RHBDD3-205ENST00000488106 WDR46O15213 610 aaKnown RBP28.09■■■□□ 2.09
RHBDD3-205ENST00000488106 SAMD1Q6SPF0 538 aaPredicted RBP28.09■■■□□ 2.09
RHBDD3-205ENST00000488106 SH3TC2Q8TF17 1288 aa28.09■■■□□ 2.09
RHBDD3-205ENST00000488106 COA7Q96BR5 231 aa28.09■■■□□ 2.09
RHBDD3-205ENST00000488106 CCDC136Q96JN2 1154 aa28.09■■■□□ 2.09
RHBDD3-205ENST00000488106 IL25Q9H293 177 aa28.09■■■□□ 2.09
RHBDD3-205ENST00000488106 NYAP2Q9P242 653 aa28.09■■■□□ 2.09
RHBDD3-205ENST00000488106 TSPY2A6NKD2 308 aa28.08■■■□□ 2.09
RHBDD3-205ENST00000488106 RANBP6O60518 1105 aaKnown RBP28.08■■■□□ 2.09
RHBDD3-205ENST00000488106 FLOT1O75955 427 aa28.08■■■□□ 2.09
RHBDD3-205ENST00000488106 RRP12Q5JTH9 1297 aaKnown RBP28.08■■■□□ 2.09
RHBDD3-205ENST00000488106 NEDD1Q8NHV4 660 aa28.08■■■□□ 2.09
RHBDD3-205ENST00000488106 CLIP2Q9UDT6 1046 aa28.08■■■□□ 2.09
RHBDD3-205ENST00000488106 LRRC47Q8N1G4 583 aaKnown RBP28.07■■■□□ 2.08
RHBDD3-205ENST00000488106 ARMC5Q96C12 935 aa28.07■■■□□ 2.08
RHBDD3-205ENST00000488106 MTMR4Q9NYA4 1195 aa28.07■■■□□ 2.08
RHBDD3-205ENST00000488106 RABGAP1Q9Y3P9 1069 aa28.07■■■□□ 2.08
RHBDD3-205ENST00000488106 CNMDO75829 334 aa28.06■■■□□ 2.08
RHBDD3-205ENST00000488106 FLT3LGP49771 235 aa28.06■■■□□ 2.08
RHBDD3-205ENST00000488106 COG2Q14746 738 aa28.06■■■□□ 2.08
RHBDD3-205ENST00000488106 Q3C1V9 767 aa28.06■■■□□ 2.08
RHBDD3-205ENST00000488106 FAM83BQ5T0W9 1011 aa28.06■■■□□ 2.08
RHBDD3-205ENST00000488106 CCAR1Q8IX12 1150 aaKnown RBP28.06■■■□□ 2.08
RHBDD3-205ENST00000488106 NBPF3Q9H094 633 aa28.06■■■□□ 2.08
RHBDD3-205ENST00000488106 PLXNA1Q9UIW2 1896 aa28.06■■■□□ 2.08
RHBDD3-205ENST00000488106 ORC4O43929 436 aa28.05■■■□□ 2.08
RHBDD3-205ENST00000488106 TTLL1O95922 423 aa28.05■■■□□ 2.08
RHBDD3-205ENST00000488106 MYCP01106 439 aaPredicted RBP28.05■■■□□ 2.08
RHBDD3-205ENST00000488106 CHMLP26374 656 aa28.05■■■□□ 2.08
RHBDD3-205ENST00000488106 LBX2Q6XYB7 198 aa28.05■■■□□ 2.08
RHBDD3-205ENST00000488106 NBPF11Q86T75 865 aa28.05■■■□□ 2.08
RHBDD3-205ENST00000488106 TBC1D10CQ8IV04 446 aa28.05■■■□□ 2.08
RHBDD3-205ENST00000488106 RAD50Q92878 1312 aa28.05■■■□□ 2.08
RHBDD3-205ENST00000488106 NUP88Q99567 741 aaPredicted RBP28.05■■■□□ 2.08
RHBDD3-205ENST00000488106 PORCNQ9H237 461 aa28.05■■■□□ 2.08
RHBDD3-205ENST00000488106 BTBD7Q9P203 1132 aa28.05■■■□□ 2.08
RHBDD3-205ENST00000488106 NMT2O60551 498 aa28.04■■■□□ 2.08
RHBDD3-205ENST00000488106 CENPBP07199 599 aaPredicted RBP28.04■■■□□ 2.08
RHBDD3-205ENST00000488106 ZNF333Q96JL9 665 aa28.04■■■□□ 2.08
RHBDD3-205ENST00000488106 DSCC1Q9BVC3 393 aa28.04■■■□□ 2.08
RHBDD3-205ENST00000488106 HOXC10Q9NYD6 342 aa28.04■■■□□ 2.08
RHBDD3-205ENST00000488106 NDUFB10O96000 172 aa28.03■■■□□ 2.08
RHBDD3-205ENST00000488106 GRK4P32298 578 aa28.03■■■□□ 2.08
RHBDD3-205ENST00000488106 RUFY2Q8WXA3 655 aa28.03■■■□□ 2.08
RHBDD3-205ENST00000488106 ATG4CQ96DT6 458 aa28.03■■■□□ 2.08
RHBDD3-205ENST00000488106 CWC22Q9HCG8 908 aaKnown RBP28.03■■■□□ 2.08
RHBDD3-205ENST00000488106 FBXO28Q9NVF7 368 aa28.03■■■□□ 2.08
RHBDD3-205ENST00000488106 ZNF236Q9UL36 1845 aa28.02■■■□□ 2.08
RHBDD3-205ENST00000488106 F5H6K3 240 aa28.02■■■□□ 2.08
RHBDD3-205ENST00000488106 TNRC18O15417 2968 aaPredicted RBP28.02■■■□□ 2.08
RHBDD3-205ENST00000488106 FGRP09769 529 aa28.02■■■□□ 2.08
RHBDD3-205ENST00000488106 DSG3P32926 999 aa28.02■■■□□ 2.08
RHBDD3-205ENST00000488106 KLRC3Q07444 240 aa28.02■■■□□ 2.08
RHBDD3-205ENST00000488106 AKNAD1Q5T1N1 836 aa28.02■■■□□ 2.08
RHBDD3-205ENST00000488106 STX8Q9UNK0 236 aa28.02■■■□□ 2.08
RHBDD3-205ENST00000488106 NEDD4P46934 1319 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms