RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 LARP1BQ659C4 914 aaKnown RBP5.99□□□□□ -1.45
ECHDC1-217ENST00000488087 HNRNPLLQ8WVV9 542 aaKnown RBP5.99□□□□□ -1.45
ECHDC1-217ENST00000488087 ZNF512BQ96KM6 892 aaPredicted RBP5.99□□□□□ -1.45
ECHDC1-217ENST00000488087 MKRN2Q9H000 416 aaKnown RBP5.99□□□□□ -1.45
ECHDC1-217ENST00000488087 TNKS2Q9H2K2 1166 aa5.99□□□□□ -1.45
ECHDC1-217ENST00000488087 CNTNAP4Q9C0A0 1308 aa5.99□□□□□ -1.45
ECHDC1-217ENST00000488087 PRR33A8MZF0 331 aa5.98□□□□□ -1.45
ECHDC1-217ENST00000488087 FOSL1P15407 271 aa5.98□□□□□ -1.45
ECHDC1-217ENST00000488087 KIR3DL1P43629 444 aa5.98□□□□□ -1.45
ECHDC1-217ENST00000488087 CASP7P55210 303 aa5.98□□□□□ -1.45
ECHDC1-217ENST00000488087 GNPTABQ3T906 1256 aa5.98□□□□□ -1.45
ECHDC1-217ENST00000488087 TDRD10Q5VZ19 366 aaKnown RBP5.98□□□□□ -1.45
ECHDC1-217ENST00000488087 FAM214BQ7L5A3 538 aa5.98□□□□□ -1.45
ECHDC1-217ENST00000488087 TMEM192Q8IY95 271 aa5.98□□□□□ -1.45
ECHDC1-217ENST00000488087 MFSD4AQ8N468 514 aa5.98□□□□□ -1.45
ECHDC1-217ENST00000488087 ARMC5Q96C12 935 aa5.98□□□□□ -1.45
ECHDC1-217ENST00000488087 DNAJC2Q99543 621 aaKnown RBP5.98□□□□□ -1.45
ECHDC1-217ENST00000488087 HIRIP3Q9BW71 556 aaPredicted RBP5.98□□□□□ -1.45
ECHDC1-217ENST00000488087 ASPNQ9BXN1 380 aa5.98□□□□□ -1.45
ECHDC1-217ENST00000488087 TRIM55Q9BYV6 548 aa5.98□□□□□ -1.45
ECHDC1-217ENST00000488087 PHAXQ9H814 394 aaKnown RBP5.98□□□□□ -1.45
ECHDC1-217ENST00000488087 FAM86C1Q9NVL1 165 aa5.98□□□□□ -1.45
ECHDC1-217ENST00000488087 KCNH3Q9ULD8 1083 aa5.98□□□□□ -1.45
ECHDC1-217ENST00000488087 LTBP3Q9NS15 1303 aa5.98□□□□□ -1.45
ECHDC1-217ENST00000488087 U2SURPO15042 1029 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-217ENST00000488087 TP53P04637 393 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-217ENST00000488087 CEACAM5P06731 702 aa5.97□□□□□ -1.45
ECHDC1-217ENST00000488087 OXCT1P55809 520 aa5.97□□□□□ -1.45
ECHDC1-217ENST00000488087 BBS9Q3SYG4 887 aa5.97□□□□□ -1.45
ECHDC1-217ENST00000488087 LCE1DQ5T752 114 aa5.97□□□□□ -1.45
ECHDC1-217ENST00000488087 VHLLQ6RSH7 139 aa5.97□□□□□ -1.45
ECHDC1-217ENST00000488087 CCDC144CPQ8IYA2 1237 aa5.97□□□□□ -1.45
ECHDC1-217ENST00000488087 PLD6Q8N2A8 252 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-217ENST00000488087 UBXN4Q92575 508 aa5.97□□□□□ -1.45
ECHDC1-217ENST00000488087 FBXL18Q96ME1 805 aa5.97□□□□□ -1.45
ECHDC1-217ENST00000488087 SUCOQ9UBS9 1254 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-217ENST00000488087 PCDHB10Q9UN67 800 aa5.97□□□□□ -1.45
ECHDC1-217ENST00000488087 RBAK-RBAKDNI3L0D1 243 aa5.96□□□□□ -1.46
ECHDC1-217ENST00000488087 COBLO75128 1261 aa5.96□□□□□ -1.46
ECHDC1-217ENST00000488087 LRRN2O75325 713 aa5.96□□□□□ -1.46
ECHDC1-217ENST00000488087 ZNF865P0CJ78 1059 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-217ENST00000488087 HOXA10P31260 410 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-217ENST00000488087 PMS1P54277 932 aaKnown RBP5.96□□□□□ -1.46
ECHDC1-217ENST00000488087 FXNQ16595 210 aa5.96□□□□□ -1.46
ECHDC1-217ENST00000488087 NBPF12Q5TAG4 269 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-217ENST00000488087 CDKAL1Q5VV42 579 aa5.96□□□□□ -1.46
ECHDC1-217ENST00000488087 INTS5Q6P9B9 1019 aaKnown RBP5.96□□□□□ -1.46
ECHDC1-217ENST00000488087 C22orf34Q6ZV56 151 aa5.96□□□□□ -1.46
ECHDC1-217ENST00000488087 DTWD2Q8NBA8 298 aa5.96□□□□□ -1.46
ECHDC1-217ENST00000488087 PMFBP1Q8TBY8 1022 aa5.96□□□□□ -1.46
ECHDC1-217ENST00000488087 NETO1Q8TDF5 533 aa5.96□□□□□ -1.46
ECHDC1-217ENST00000488087 MKNK2Q9HBH9 465 aa5.96□□□□□ -1.46
ECHDC1-217ENST00000488087 ZC3H7BQ9UGR2 993 aaKnown RBP5.96□□□□□ -1.46
ECHDC1-217ENST00000488087 ZNF214Q9UL59 606 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-217ENST00000488087 RNF112Q9ULX5 631 aa5.96□□□□□ -1.46
ECHDC1-217ENST00000488087 CAPN6Q9Y6Q1 641 aa5.96□□□□□ -1.46
ECHDC1-217ENST00000488087 U3KQE9 123 aa5.96□□□□□ -1.46
ECHDC1-217ENST00000488087 C9IYK1 514 aa5.95□□□□□ -1.46
ECHDC1-217ENST00000488087 DDAH1O94760 285 aa5.95□□□□□ -1.46
ECHDC1-217ENST00000488087 SLC7A5Q01650 507 aa5.95□□□□□ -1.46
ECHDC1-217ENST00000488087 TNK2Q07912 1038 aa5.95□□□□□ -1.46
ECHDC1-217ENST00000488087 IFI16Q16666 785 aaKnown RBP5.95□□□□□ -1.46
ECHDC1-217ENST00000488087 SMARCC1Q92922 1105 aaPredicted RBP5.95□□□□□ -1.46
ECHDC1-217ENST00000488087 Q96M66 194 aa5.95□□□□□ -1.46
ECHDC1-217ENST00000488087 ASCC2Q9H1I8 757 aaPredicted RBP5.95□□□□□ -1.46
ECHDC1-217ENST00000488087 ST7Q9NRC1 585 aa5.95□□□□□ -1.46
ECHDC1-217ENST00000488087 FBXL21Q9UKT6 434 aa5.95□□□□□ -1.46
ECHDC1-217ENST00000488087 COL17A1Q9UMD9 1497 aaPredicted RBP5.95□□□□□ -1.46
ECHDC1-217ENST00000488087 TMEM265A0A087WTH1 108 aa5.94□□□□□ -1.46
ECHDC1-217ENST00000488087 KLF4O43474 513 aa5.94□□□□□ -1.46
ECHDC1-217ENST00000488087 SSTR4P31391 388 aa5.94□□□□□ -1.46
ECHDC1-217ENST00000488087 NKPD1Q17RQ9 610 aa5.94□□□□□ -1.46
ECHDC1-217ENST00000488087 SOGA3Q5TF21 947 aa5.94□□□□□ -1.46
ECHDC1-217ENST00000488087 DCAF15Q66K64 600 aa5.94□□□□□ -1.46
ECHDC1-217ENST00000488087 KIAA1211LQ6NV74 962 aa5.94□□□□□ -1.46
ECHDC1-217ENST00000488087 C6orf15Q6UXA7 325 aaPredicted RBP5.94□□□□□ -1.46
ECHDC1-217ENST00000488087 PPFIBP1Q86W92 1011 aa5.94□□□□□ -1.46
ECHDC1-217ENST00000488087 SPACA3Q8IXA5 215 aa5.94□□□□□ -1.46
ECHDC1-217ENST00000488087 PIWIL2Q8TC59 973 aaKnown RBP5.94□□□□□ -1.46
ECHDC1-217ENST00000488087 VWCEQ96DN2 955 aa5.94□□□□□ -1.46
ECHDC1-217ENST00000488087 PLAGL2Q9UPG8 496 aa5.94□□□□□ -1.46
ECHDC1-217ENST00000488087 PCDHB12Q9Y5F1 795 aa5.94□□□□□ -1.46
ECHDC1-217ENST00000488087 B2RBV5 119 aa5.93□□□□□ -1.46
ECHDC1-217ENST00000488087 H3BS24 57 aa5.93□□□□□ -1.46
ECHDC1-217ENST00000488087 CLCN7P51798 805 aa5.93□□□□□ -1.46
ECHDC1-217ENST00000488087 AUHQ13825 339 aaKnown RBP5.93□□□□□ -1.46
ECHDC1-217ENST00000488087 RAB33AQ14088 237 aa5.93□□□□□ -1.46
ECHDC1-217ENST00000488087 LRP8Q14114 963 aa5.93□□□□□ -1.46
ECHDC1-217ENST00000488087 NCAPHQ15003 741 aa5.93□□□□□ -1.46
ECHDC1-217ENST00000488087 CLEC16AQ2KHT3 1053 aa5.93□□□□□ -1.46
ECHDC1-217ENST00000488087 AXDND1Q5T1B0 1012 aaPredicted RBP5.93□□□□□ -1.46
ECHDC1-217ENST00000488087 NBPF6Q5VWK0 638 aa5.93□□□□□ -1.46
ECHDC1-217ENST00000488087 FAM178BQ8IXR5 827 aa5.93□□□□□ -1.46
ECHDC1-217ENST00000488087 HRASLS5Q96KN8 279 aa5.93□□□□□ -1.46
ECHDC1-217ENST00000488087 NBPF4Q96M43 638 aa5.93□□□□□ -1.46
ECHDC1-217ENST00000488087 HSPA12BQ96MM6 686 aa5.93□□□□□ -1.46
ECHDC1-217ENST00000488087 KRTAP4-2Q9BYR5 136 aa5.93□□□□□ -1.46
ECHDC1-217ENST00000488087 GPATCH2Q9NW75 528 aa5.93□□□□□ -1.46
ECHDC1-217ENST00000488087 CCDC85CA6NKD9 419 aa5.92□□□□□ -1.46
ECHDC1-217ENST00000488087 RBL2Q08999 1139 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms