RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 NYAP2Q9P242 653 aa20.27■□□□□ 0.84
SHROOM1-205ENST00000488072 LAMA4Q16363 1823 aa20.27■□□□□ 0.84
SHROOM1-205ENST00000488072 ADGRA2Q96PE1 1338 aa20.27■□□□□ 0.83
SHROOM1-205ENST00000488072 ANTXR2P58335 489 aa20.26■□□□□ 0.83
SHROOM1-205ENST00000488072 C12orf42Q96LP6 360 aa20.26■□□□□ 0.83
SHROOM1-205ENST00000488072 RNF41Q9H4P4 317 aaPredicted RBP20.26■□□□□ 0.83
SHROOM1-205ENST00000488072 SAGE1Q9NXZ1 904 aa20.26■□□□□ 0.83
SHROOM1-205ENST00000488072 STX8Q9UNK0 236 aa20.26■□□□□ 0.83
SHROOM1-205ENST00000488072 GPR25O00155 361 aa20.25■□□□□ 0.83
SHROOM1-205ENST00000488072 NDUFB10O96000 172 aa20.25■□□□□ 0.83
SHROOM1-205ENST00000488072 CTCFP49711 727 aaPredicted RBP20.25■□□□□ 0.83
SHROOM1-205ENST00000488072 ADCK5Q3MIX3 580 aa20.25■□□□□ 0.83
SHROOM1-205ENST00000488072 OTUD7BQ6GQQ9 843 aa20.25■□□□□ 0.83
SHROOM1-205ENST00000488072 SAMD1Q6SPF0 538 aaPredicted RBP20.25■□□□□ 0.83
SHROOM1-205ENST00000488072 TMEM47Q9BQJ4 181 aa20.25■□□□□ 0.83
SHROOM1-205ENST00000488072 ZFYVE28Q9HCC9 887 aa20.25■□□□□ 0.83
SHROOM1-205ENST00000488072 FBXO28Q9NVF7 368 aa20.25■□□□□ 0.83
SHROOM1-205ENST00000488072 LOC285556D6RIA3 1793 aa20.24■□□□□ 0.83
SHROOM1-205ENST00000488072 F5H6K3 240 aa20.24■□□□□ 0.83
SHROOM1-205ENST00000488072 TTLL1O95922 423 aa20.24■□□□□ 0.83
SHROOM1-205ENST00000488072 CPA1P15085 419 aa20.24■□□□□ 0.83
SHROOM1-205ENST00000488072 KLRC3Q07444 240 aa20.24■□□□□ 0.83
SHROOM1-205ENST00000488072 FAM83BQ5T0W9 1011 aa20.24■□□□□ 0.83
SHROOM1-205ENST00000488072 ZNF296Q8WUU4 475 aaPredicted RBP20.24■□□□□ 0.83
SHROOM1-205ENST00000488072 ESR2Q92731 530 aa20.24■□□□□ 0.83
SHROOM1-205ENST00000488072 MKL1Q969V6 931 aa20.24■□□□□ 0.83
SHROOM1-205ENST00000488072 ALDH1A1P00352 501 aa20.23■□□□□ 0.83
SHROOM1-205ENST00000488072 CTGFP29279 349 aa20.23■□□□□ 0.83
SHROOM1-205ENST00000488072 NOVP48745 357 aa20.23■□□□□ 0.83
SHROOM1-205ENST00000488072 USP14P54578 494 aa20.23■□□□□ 0.83
SHROOM1-205ENST00000488072 C17orf99Q6UX52 265 aa20.23■□□□□ 0.83
SHROOM1-205ENST00000488072 CATSPERGQ6ZRH7 1159 aa20.23■□□□□ 0.83
SHROOM1-205ENST00000488072 MB21D2Q8IYB1 491 aaPredicted RBP20.23■□□□□ 0.83
SHROOM1-205ENST00000488072 USP26Q9BXU7 913 aa20.23■□□□□ 0.83
SHROOM1-205ENST00000488072 LRRC2Q9BYS8 371 aa20.23■□□□□ 0.83
SHROOM1-205ENST00000488072 ARHGAP39Q9C0H5 1083 aa20.23■□□□□ 0.83
SHROOM1-205ENST00000488072 TXNRD2Q9NNW7 524 aa20.23■□□□□ 0.83
SHROOM1-205ENST00000488072 TLR2O60603 784 aa20.22■□□□□ 0.83
SHROOM1-205ENST00000488072 HOXA7P31268 230 aaPredicted RBP20.22■□□□□ 0.83
SHROOM1-205ENST00000488072 C8orf34Q49A92 452 aa20.22■□□□□ 0.83
SHROOM1-205ENST00000488072 SLFN13Q68D06 897 aa20.22■□□□□ 0.83
SHROOM1-205ENST00000488072 TCEANC2Q96MN5 208 aa20.22■□□□□ 0.83
SHROOM1-205ENST00000488072 ZSCAN10Q96SZ4 725 aaPredicted RBP20.22■□□□□ 0.83
SHROOM1-205ENST00000488072 CFHR5Q9BXR6 569 aa20.22■□□□□ 0.83
SHROOM1-205ENST00000488072 TANGO6Q9C0B7 1094 aa20.22■□□□□ 0.83
SHROOM1-205ENST00000488072 TCP11L1Q9NUJ3 509 aa20.22■□□□□ 0.83
SHROOM1-205ENST00000488072 USP17L15C9J2P7 530 aa20.21■□□□□ 0.83
SHROOM1-205ENST00000488072 USP17L13C9JLJ4 530 aa20.21■□□□□ 0.83
SHROOM1-205ENST00000488072 USP17L11C9JVI0 530 aa20.21■□□□□ 0.83
SHROOM1-205ENST00000488072 USP17L18D6R9N7 530 aa20.21■□□□□ 0.83
SHROOM1-205ENST00000488072 USP17L22D6RA61 530 aa20.21■□□□□ 0.83
SHROOM1-205ENST00000488072 USP17L17D6RBQ6 530 aa20.21■□□□□ 0.83
SHROOM1-205ENST00000488072 USP17L19D6RCP7 530 aa20.21■□□□□ 0.83
SHROOM1-205ENST00000488072 USP17L20D6RJB6 530 aa20.21■□□□□ 0.83
SHROOM1-205ENST00000488072 MCCP23508 829 aa20.21■□□□□ 0.83
SHROOM1-205ENST00000488072 USP17L24Q0WX57 530 aa20.21■□□□□ 0.83
SHROOM1-205ENST00000488072 ANKRD13CQ8N6S4 541 aa20.21■□□□□ 0.83
SHROOM1-205ENST00000488072 ENAHQ8N8S7 591 aaPredicted RBP20.21■□□□□ 0.83
SHROOM1-205ENST00000488072 CD99L2Q8TCZ2 262 aa20.21■□□□□ 0.83
SHROOM1-205ENST00000488072 PARK7Q99497 189 aaKnown RBP20.21■□□□□ 0.83
SHROOM1-205ENST00000488072 KRT23Q9C075 422 aa20.21■□□□□ 0.83
SHROOM1-205ENST00000488072 SNX14Q9Y5W7 946 aa20.21■□□□□ 0.83
SHROOM1-205ENST00000488072 TNKSO95271 1327 aa20.21■□□□□ 0.83
SHROOM1-205ENST00000488072 CNMDO75829 334 aa20.2■□□□□ 0.82
SHROOM1-205ENST00000488072 BCRP11274 1271 aa20.2■□□□□ 0.82
SHROOM1-205ENST00000488072 PCP11498 1178 aaKnown RBP20.2■□□□□ 0.82
SHROOM1-205ENST00000488072 OSBPP22059 807 aa20.2■□□□□ 0.82
SHROOM1-205ENST00000488072 HSPA4P34932 840 aa20.2■□□□□ 0.82
SHROOM1-205ENST00000488072 HERVK_113P62684 666 aa20.2■□□□□ 0.82
SHROOM1-205ENST00000488072 IRX3P78415 501 aaPredicted RBP20.2■□□□□ 0.82
SHROOM1-205ENST00000488072 Q3C1V9 767 aa20.2■□□□□ 0.82
SHROOM1-205ENST00000488072 NCOA7Q8NI08 942 aa20.2■□□□□ 0.82
SHROOM1-205ENST00000488072 ZCCHC17Q9NP64 241 aaKnown RBP20.2■□□□□ 0.82
SHROOM1-205ENST00000488072 RBPJLQ9UBG7 517 aa20.2■□□□□ 0.82
SHROOM1-205ENST00000488072 SLC45A1Q9Y2W3 748 aa20.2■□□□□ 0.82
SHROOM1-205ENST00000488072 SPDYE16A6NNV3 312 aaPredicted RBP20.19■□□□□ 0.82
SHROOM1-205ENST00000488072 TOP1P11387 765 aaKnown RBP20.19■□□□□ 0.82
SHROOM1-205ENST00000488072 SEC23AQ15436 765 aa20.19■□□□□ 0.82
SHROOM1-205ENST00000488072 COL13A1Q5TAT6 717 aaPredicted RBP20.19■□□□□ 0.82
SHROOM1-205ENST00000488072 TTBK2Q6IQ55 1244 aa20.19■□□□□ 0.82
SHROOM1-205ENST00000488072 KCTD1Q719H9 257 aa20.19■□□□□ 0.82
SHROOM1-205ENST00000488072 SMCR8Q8TEV9 937 aaPredicted RBP20.19■□□□□ 0.82
SHROOM1-205ENST00000488072 KCNB2Q92953 911 aa20.19■□□□□ 0.82
SHROOM1-205ENST00000488072 ATG4CQ96DT6 458 aa20.19■□□□□ 0.82
SHROOM1-205ENST00000488072 PAGR1Q9BTK6 254 aa20.19■□□□□ 0.82
SHROOM1-205ENST00000488072 SH2D4AQ9H788 454 aa20.19■□□□□ 0.82
SHROOM1-205ENST00000488072 CNNM2Q9H8M5 875 aa20.19■□□□□ 0.82
SHROOM1-205ENST00000488072 GOPCQ9HD26 462 aa20.19■□□□□ 0.82
SHROOM1-205ENST00000488072 FRMPD2Q68DX3 1309 aaPredicted RBP20.19■□□□□ 0.82
SHROOM1-205ENST00000488072 ZSWIM8A7E2V4 1837 aa20.18■□□□□ 0.82
SHROOM1-205ENST00000488072 FKTNO75072 461 aa20.18■□□□□ 0.82
SHROOM1-205ENST00000488072 REC8O95072 547 aa20.18■□□□□ 0.82
SHROOM1-205ENST00000488072 TAL1P17542 331 aaPredicted RBP20.18■□□□□ 0.82
SHROOM1-205ENST00000488072 SNAP25P60880 206 aa20.18■□□□□ 0.82
SHROOM1-205ENST00000488072 TRDNQ13061 729 aa20.18■□□□□ 0.82
SHROOM1-205ENST00000488072 RALYLQ86SE5 291 aaKnown RBP20.18■□□□□ 0.82
SHROOM1-205ENST00000488072 CPVLQ9H3G5 476 aa20.18■□□□□ 0.82
SHROOM1-205ENST00000488072 BTBD7Q9P203 1132 aa20.18■□□□□ 0.82
SHROOM1-205ENST00000488072 ISY1Q9ULR0 285 aaKnown RBP20.18■□□□□ 0.82
SHROOM1-205ENST00000488072 CASP8AP2Q9UKL3 1982 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms