RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 FOXQ1Q9C009 403 aa7.67□□□□□ -1.18
BRCA1-217ENST00000487825 MIR1-1HGQ9H1L0 117 aa7.67□□□□□ -1.18
BRCA1-217ENST00000487825 VAV3Q9UKW4 847 aa7.67□□□□□ -1.18
BRCA1-217ENST00000487825 NPHP4O75161 1426 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-217ENST00000487825 SAMD9LQ8IVG5 1584 aa7.67□□□□□ -1.18
BRCA1-217ENST00000487825 PHLPP1O60346 1717 aa7.66□□□□□ -1.18
BRCA1-217ENST00000487825 TMEM265A0A087WTH1 108 aa7.66□□□□□ -1.18
BRCA1-217ENST00000487825 SORBS3O60504 671 aa7.66□□□□□ -1.18
BRCA1-217ENST00000487825 LRIG2O94898 1065 aa7.66□□□□□ -1.18
BRCA1-217ENST00000487825 SLITRK5O94991 958 aa7.66□□□□□ -1.18
BRCA1-217ENST00000487825 CBLL1Q75N03 491 aa7.66□□□□□ -1.18
BRCA1-217ENST00000487825 KRTAP1-3Q8IUG1 177 aa7.66□□□□□ -1.18
BRCA1-217ENST00000487825 MRS2Q9HD23 443 aa7.66□□□□□ -1.18
BRCA1-217ENST00000487825 VTI1BQ9UEU0 232 aa7.66□□□□□ -1.18
BRCA1-217ENST00000487825 FAM135BQ49AJ0 1406 aa7.66□□□□□ -1.18
BRCA1-217ENST00000487825 INO80Q9ULG1 1556 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-217ENST00000487825 ADGBQ8N7X0 1667 aa7.66□□□□□ -1.18
BRCA1-217ENST00000487825 LRRIQ1Q96JM4 1722 aa7.66□□□□□ -1.18
BRCA1-217ENST00000487825 IGF2BP3O00425 579 aaKnown RBP eCLIP7.65□□□□□ -1.18
BRCA1-217ENST00000487825 GFRA2O00451 464 aa7.65□□□□□ -1.18
BRCA1-217ENST00000487825 ST13P50502 369 aaKnown RBP7.65□□□□□ -1.18
BRCA1-217ENST00000487825 USP31Q70CQ4 1352 aa7.65□□□□□ -1.18
BRCA1-217ENST00000487825 HID1Q8IV36 788 aa7.65□□□□□ -1.18
BRCA1-217ENST00000487825 XAGE3Q8WTP9 111 aa7.65□□□□□ -1.18
BRCA1-217ENST00000487825 MIPEPQ99797 713 aa7.65□□□□□ -1.18
BRCA1-217ENST00000487825 NOC4LQ9BVI4 516 aaKnown RBP7.65□□□□□ -1.18
BRCA1-217ENST00000487825 PRDM5Q9NQX1 630 aaPredicted RBP7.65□□□□□ -1.18
BRCA1-217ENST00000487825 TPX2Q9ULW0 747 aaKnown RBP7.65□□□□□ -1.18
BRCA1-217ENST00000487825 RNF114Q9Y508 228 aa7.65□□□□□ -1.18
BRCA1-217ENST00000487825 CDK12Q9NYV4 1490 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-217ENST00000487825 GNAT3A8MTJ3 354 aa7.64□□□□□ -1.19
BRCA1-217ENST00000487825 RLBP1P12271 317 aa7.64□□□□□ -1.19
BRCA1-217ENST00000487825 TSNAXIP1Q2TAA8 658 aa7.64□□□□□ -1.19
BRCA1-217ENST00000487825 ZNF792Q3KQV3 632 aa7.64□□□□□ -1.19
BRCA1-217ENST00000487825 PRAMEF13Q5VWM6 474 aa7.64□□□□□ -1.19
BRCA1-217ENST00000487825 RIN3Q8TB24 985 aa7.64□□□□□ -1.19
BRCA1-217ENST00000487825 KRTAP4-12Q9BQ66 201 aa7.64□□□□□ -1.19
BRCA1-217ENST00000487825 ATP7AQ04656 1500 aa7.63□□□□□ -1.19
BRCA1-217ENST00000487825 CNTNAP4Q9C0A0 1308 aa7.63□□□□□ -1.19
BRCA1-217ENST00000487825 RBAK-RBAKDNI3L0D1 243 aa7.63□□□□□ -1.19
BRCA1-217ENST00000487825 ERCC3P19447 782 aa7.63□□□□□ -1.19
BRCA1-217ENST00000487825 NKPD1Q17RQ9 610 aa7.63□□□□□ -1.19
BRCA1-217ENST00000487825 SPACA3Q8IXA5 215 aa7.63□□□□□ -1.19
BRCA1-217ENST00000487825 PHC3Q8NDX5 983 aa7.63□□□□□ -1.19
BRCA1-217ENST00000487825 CRELD1Q96HD1 420 aa7.63□□□□□ -1.19
BRCA1-217ENST00000487825 DPH2Q9BQC3 489 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-217ENST00000487825 TNKS2Q9H2K2 1166 aa7.63□□□□□ -1.19
BRCA1-217ENST00000487825 UGGT1Q9NYU2 1555 aa7.63□□□□□ -1.19
BRCA1-217ENST00000487825 SETBP1Q9Y6X0 1596 aa7.63□□□□□ -1.19
BRCA1-217ENST00000487825 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.62□□□□□ -1.19
BRCA1-217ENST00000487825 PRR33A8MZF0 331 aa7.62□□□□□ -1.19
BRCA1-217ENST00000487825 PGRP06401 933 aa7.62□□□□□ -1.19
BRCA1-217ENST00000487825 FUT4P22083 530 aa7.62□□□□□ -1.19
BRCA1-217ENST00000487825 LETMD1Q6P1Q0 360 aa7.62□□□□□ -1.19
BRCA1-217ENST00000487825 BNC2Q6ZN30 1099 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-217ENST00000487825 ANKLE2Q86XL3 938 aa7.62□□□□□ -1.19
BRCA1-217ENST00000487825 MFSD2AQ8NA29 543 aa7.62□□□□□ -1.19
BRCA1-217ENST00000487825 PI4K2BQ8TCG2 481 aa7.62□□□□□ -1.19
BRCA1-217ENST00000487825 ADAMTS6Q9UKP5 1117 aa7.62□□□□□ -1.19
BRCA1-217ENST00000487825 SNX11Q9Y5W9 270 aa7.62□□□□□ -1.19
BRCA1-217ENST00000487825 SHPRHQ149N8 1683 aa7.62□□□□□ -1.19
BRCA1-217ENST00000487825 LRP6O75581 1613 aa7.62□□□□□ -1.19
BRCA1-217ENST00000487825 COL16A1Q07092 1604 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-217ENST00000487825 TROQ12816 1431 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-217ENST00000487825 EP400Q96L91 3159 aa7.61□□□□□ -1.19
BRCA1-217ENST00000487825 CST3P01034 146 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-217ENST00000487825 CAP2P40123 477 aa7.61□□□□□ -1.19
BRCA1-217ENST00000487825 PRDM7Q9NQW5 492 aa7.61□□□□□ -1.19
BRCA1-217ENST00000487825 MBNL3Q9NUK0 354 aaKnown RBP7.61□□□□□ -1.19
BRCA1-217ENST00000487825 TJP2Q9UDY2 1190 aa7.61□□□□□ -1.19
BRCA1-217ENST00000487825 MAPK8IP1Q9UQF2 711 aa7.61□□□□□ -1.19
BRCA1-217ENST00000487825 FAM135AQ9P2D6 1515 aa7.61□□□□□ -1.19
BRCA1-217ENST00000487825 A2MP01023 1474 aa7.61□□□□□ -1.19
BRCA1-217ENST00000487825 PZPP20742 1482 aa7.61□□□□□ -1.19
BRCA1-217ENST00000487825 LRRC9Q6ZRR7 1453 aa7.61□□□□□ -1.19
BRCA1-217ENST00000487825 NLRP1Q9C000 1473 aa7.61□□□□□ -1.19
BRCA1-217ENST00000487825 TNRQ92752 1358 aa7.6□□□□□ -1.19
BRCA1-217ENST00000487825 LRP5O75197 1615 aa7.6□□□□□ -1.19
BRCA1-217ENST00000487825 FAM155AB1AL88 458 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-217ENST00000487825 RNASE1P07998 156 aaKnown RBP7.6□□□□□ -1.19
BRCA1-217ENST00000487825 GBP2P32456 591 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-217ENST00000487825 RPL6Q02878 288 aaKnown RBP7.6□□□□□ -1.19
BRCA1-217ENST00000487825 IKZF1Q13422 519 aa7.6□□□□□ -1.19
BRCA1-217ENST00000487825 SFRP5Q5T4F7 317 aa7.6□□□□□ -1.19
BRCA1-217ENST00000487825 ANGEL2Q5VTE6 544 aaKnown RBP7.6□□□□□ -1.19
BRCA1-217ENST00000487825 CDKAL1Q5VV42 579 aa7.6□□□□□ -1.19
BRCA1-217ENST00000487825 ASB11Q8WXH4 323 aa7.6□□□□□ -1.19
BRCA1-217ENST00000487825 FMNL2Q96PY5 1086 aa7.6□□□□□ -1.19
BRCA1-217ENST00000487825 RC3H2Q9HBD1 1191 aaKnown RBP7.6□□□□□ -1.19
BRCA1-217ENST00000487825 SYCP2Q9BX26 1530 aa7.6□□□□□ -1.19
BRCA1-217ENST00000487825 KDM5DQ9BY66 1539 aa7.6□□□□□ -1.19
BRCA1-217ENST00000487825 MAP3K1Q13233 1512 aa7.59□□□□□ -1.19
BRCA1-217ENST00000487825 UBR1Q8IWV7 1749 aa7.59□□□□□ -1.19
BRCA1-217ENST00000487825 CBX7O95931 251 aa7.59□□□□□ -1.19
BRCA1-217ENST00000487825 PF4P02776 101 aa7.59□□□□□ -1.19
BRCA1-217ENST00000487825 ITGB5P18084 799 aa7.59□□□□□ -1.19
BRCA1-217ENST00000487825 TXKP42681 527 aa7.59□□□□□ -1.19
BRCA1-217ENST00000487825 PDE4BQ07343 736 aa7.59□□□□□ -1.19
BRCA1-217ENST00000487825 CAMK2GQ13555 558 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-217ENST00000487825 LCE3BQ5TA77 95 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms