RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 CWC22Q9HCG8 908 aaKnown RBP6.33□□□□□ -1.4
HMGB1P36-201ENST00000487709 GCM1Q9NP62 436 aa6.33□□□□□ -1.4
HMGB1P36-201ENST00000487709 YBX2Q9Y2T7 364 aaKnown RBP6.33□□□□□ -1.4
HMGB1P36-201ENST00000487709 TEX51A0A1B0GUA7 166 aa6.32□□□□□ -1.4
HMGB1P36-201ENST00000487709 RFXAPO00287 272 aa6.32□□□□□ -1.4
HMGB1P36-201ENST00000487709 PEX10O60683 326 aa6.32□□□□□ -1.4
HMGB1P36-201ENST00000487709 TRIM13O60858 407 aa6.32□□□□□ -1.4
HMGB1P36-201ENST00000487709 SYN1P17600 705 aa6.32□□□□□ -1.4
HMGB1P36-201ENST00000487709 SSPNQ14714 243 aa6.32□□□□□ -1.4
HMGB1P36-201ENST00000487709 CCDC85BQ15834 202 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P36-201ENST00000487709 MAP3K11Q16584 847 aa6.32□□□□□ -1.4
HMGB1P36-201ENST00000487709 DTWD2Q8NBA8 298 aa6.32□□□□□ -1.4
HMGB1P36-201ENST00000487709 DHX38Q92620 1227 aaKnown RBP6.32□□□□□ -1.4
HMGB1P36-201ENST00000487709 GPR62Q9BZJ7 368 aa6.32□□□□□ -1.4
HMGB1P36-201ENST00000487709 EAPPQ56P03 285 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P36-201ENST00000487709 MARCH10Q8NA82 808 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P36-201ENST00000487709 BCL2L13Q9BXK5 485 aa6.31□□□□□ -1.4
HMGB1P36-201ENST00000487709 ZNF552Q9H707 407 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P36-201ENST00000487709 CEP131Q9UPN4 1083 aa6.31□□□□□ -1.4
HMGB1P36-201ENST00000487709 TACC3Q9Y6A5 838 aa6.31□□□□□ -1.4
HMGB1P36-201ENST00000487709 LRRN2O75325 713 aa6.3□□□□□ -1.4
HMGB1P36-201ENST00000487709 PI3P19957 117 aa6.3□□□□□ -1.4
HMGB1P36-201ENST00000487709 RPS26P62854 115 aaKnown RBP6.3□□□□□ -1.4
HMGB1P36-201ENST00000487709 PDE4BQ07343 736 aa6.3□□□□□ -1.4
HMGB1P36-201ENST00000487709 NR0B2Q15466 257 aa6.3□□□□□ -1.4
HMGB1P36-201ENST00000487709 MCATQ8IVS2 390 aaKnown RBP6.3□□□□□ -1.4
HMGB1P36-201ENST00000487709 SIRT2Q8IXJ6 389 aa6.3□□□□□ -1.4
HMGB1P36-201ENST00000487709 PPP1R13LQ8WUF5 828 aa6.3□□□□□ -1.4
HMGB1P36-201ENST00000487709 ACSF2Q96CM8 615 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P36-201ENST00000487709 KCNH3Q9ULD8 1083 aa6.3□□□□□ -1.4
HMGB1P36-201ENST00000487709 PSPNO60542 156 aa6.29□□□□□ -1.4
HMGB1P36-201ENST00000487709 RANGAP1P46060 587 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P36-201ENST00000487709 DNAJC14Q6Y2X3 702 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P36-201ENST00000487709 SPPL2CQ8IUH8 684 aa6.29□□□□□ -1.4
HMGB1P36-201ENST00000487709 RGS22Q8NE09 1264 aa6.29□□□□□ -1.4
HMGB1P36-201ENST00000487709 MIR1-1HGQ9H1L0 117 aa6.29□□□□□ -1.4
HMGB1P36-201ENST00000487709 RTEL1Q9NZ71 1219 aa6.29□□□□□ -1.4
HMGB1P36-201ENST00000487709 EBF1Q9UH73 591 aa6.29□□□□□ -1.4
HMGB1P36-201ENST00000487709 CHRNEQ04844 493 aa6.28□□□□□ -1.4
HMGB1P36-201ENST00000487709 DUSP4Q13115 394 aa6.28□□□□□ -1.4
HMGB1P36-201ENST00000487709 ADGRF1Q5T601 910 aa6.28□□□□□ -1.4
HMGB1P36-201ENST00000487709 TMEM151BQ8IW70 566 aa6.28□□□□□ -1.4
HMGB1P36-201ENST00000487709 FAM13CQ8NE31 585 aa6.28□□□□□ -1.4
HMGB1P36-201ENST00000487709 PANK1Q8TE04 598 aa6.28□□□□□ -1.4
HMGB1P36-201ENST00000487709 CYB5D2Q8WUJ1 264 aa6.28□□□□□ -1.4
HMGB1P36-201ENST00000487709 CORINQ9Y5Q5 1042 aa6.28□□□□□ -1.4
HMGB1P36-201ENST00000487709 OR14I1A6ND48 311 aa6.27□□□□□ -1.41
HMGB1P36-201ENST00000487709 UPK3BL1B0FP48 263 aa6.27□□□□□ -1.41
HMGB1P36-201ENST00000487709 UPK3BL2E5RIL1 263 aa6.27□□□□□ -1.41
HMGB1P36-201ENST00000487709 LIG3P49916 1009 aa6.27□□□□□ -1.41
HMGB1P36-201ENST00000487709 AGMOQ6ZNB7 445 aa6.27□□□□□ -1.41
HMGB1P36-201ENST00000487709 ANKS4BQ8N8V4 417 aa6.27□□□□□ -1.41
HMGB1P36-201ENST00000487709 GIPC2Q8TF65 315 aa6.27□□□□□ -1.41
HMGB1P36-201ENST00000487709 JARID2Q92833 1246 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P36-201ENST00000487709 ADAM30Q9UKF2 790 aa6.27□□□□□ -1.41
HMGB1P36-201ENST00000487709 SHISA3A0PJX4 238 aa6.26□□□□□ -1.41
HMGB1P36-201ENST00000487709 OTOL1A6NHN0 477 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P36-201ENST00000487709 SASH1O94885 1247 aa6.26□□□□□ -1.41
HMGB1P36-201ENST00000487709 PLCG1P19174 1290 aa6.26□□□□□ -1.41
HMGB1P36-201ENST00000487709 EIF4BP23588 611 aaKnown RBP6.26□□□□□ -1.41
HMGB1P36-201ENST00000487709 TNNI2P48788 182 aa6.26□□□□□ -1.41
HMGB1P36-201ENST00000487709 SRSF3P84103 164 aaKnown RBP6.26□□□□□ -1.41
HMGB1P36-201ENST00000487709 XPCQ01831 940 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P36-201ENST00000487709 TEKQ02763 1124 aa6.26□□□□□ -1.41
HMGB1P36-201ENST00000487709 SNX17Q15036 470 aa6.26□□□□□ -1.41
HMGB1P36-201ENST00000487709 DBX2Q6ZNG2 339 aa6.26□□□□□ -1.41
HMGB1P36-201ENST00000487709 PRRT2Q7Z6L0 340 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P36-201ENST00000487709 RNF141Q8WVD5 230 aa6.26□□□□□ -1.41
HMGB1P36-201ENST00000487709 SHISA4Q96DD7 197 aa6.26□□□□□ -1.41
HMGB1P36-201ENST00000487709 KRTAP17-1Q9BYP8 105 aa6.26□□□□□ -1.41
HMGB1P36-201ENST00000487709 MRS2Q9HD23 443 aa6.26□□□□□ -1.41
HMGB1P36-201ENST00000487709 IRAK3Q9Y616 596 aa6.26□□□□□ -1.41
HMGB1P36-201ENST00000487709 USP2O75604 605 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P36-201ENST00000487709 LDHBP07195 334 aaKnown RBP6.25□□□□□ -1.41
HMGB1P36-201ENST00000487709 P4HBP07237 508 aaKnown RBP6.25□□□□□ -1.41
HMGB1P36-201ENST00000487709 TFE3P19532 575 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P36-201ENST00000487709 AFF3P51826 1226 aaKnown RBP6.25□□□□□ -1.41
HMGB1P36-201ENST00000487709 EPHB3P54753 998 aa6.25□□□□□ -1.41
HMGB1P36-201ENST00000487709 RPL6Q02878 288 aaKnown RBP6.25□□□□□ -1.41
HMGB1P36-201ENST00000487709 TSNAXIP1Q2TAA8 658 aa6.25□□□□□ -1.41
HMGB1P36-201ENST00000487709 SKOR2Q2VWA4 1001 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P36-201ENST00000487709 NPM2Q86SE8 214 aaKnown RBP6.25□□□□□ -1.41
HMGB1P36-201ENST00000487709 FEZF2Q8TBJ5 459 aa6.25□□□□□ -1.41
HMGB1P36-201ENST00000487709 SIGLEC10Q96LC7 697 aa6.25□□□□□ -1.41
HMGB1P36-201ENST00000487709 XYLT2Q9H1B5 865 aa6.25□□□□□ -1.41
HMGB1P36-201ENST00000487709 MBD1Q9UIS9 605 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P36-201ENST00000487709 RBM47A0AV96 593 aaKnown RBP6.24□□□□□ -1.41
HMGB1P36-201ENST00000487709 PRPF40AO75400 957 aaKnown RBP6.24□□□□□ -1.41
HMGB1P36-201ENST00000487709 EFEMP2O95967 443 aa6.24□□□□□ -1.41
HMGB1P36-201ENST00000487709 RBM25P49756 843 aaKnown RBP6.24□□□□□ -1.41
HMGB1P36-201ENST00000487709 KRTAP10-2P60368 255 aa6.24□□□□□ -1.41
HMGB1P36-201ENST00000487709 CLEC16AQ2KHT3 1053 aa6.24□□□□□ -1.41
HMGB1P36-201ENST00000487709 VMACQ2NL98 169 aa6.24□□□□□ -1.41
HMGB1P36-201ENST00000487709 ZDHHC14Q8IZN3 488 aa6.24□□□□□ -1.41
HMGB1P36-201ENST00000487709 CXorf38Q8TB03 319 aa6.24□□□□□ -1.41
HMGB1P36-201ENST00000487709 FRMD6Q96NE9 622 aa6.24□□□□□ -1.41
HMGB1P36-201ENST00000487709 SIRT5Q9NXA8 310 aa6.24□□□□□ -1.41
HMGB1P36-201ENST00000487709 YARSP54577 528 aaKnown RBP6.23□□□□□ -1.41
HMGB1P36-201ENST00000487709 LINC01599Q8WXQ3 324 aa6.23□□□□□ -1.41
HMGB1P36-201ENST00000487709 G6PC3Q9BUM1 346 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms