RNA–Protein interactions for RNA: ENST00000487565.5

GARNL3-218, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-218ENST00000487565 GAS6Q14393 721 aa9.27□□□□□ -0.93
GARNL3-218ENST00000487565 TXNRD3Q86VQ6 643 aa9.27□□□□□ -0.93
GARNL3-218ENST00000487565 CNTROBQ8N137 903 aa9.27□□□□□ -0.93
GARNL3-218ENST00000487565 LARGE2Q8N3Y3 721 aa9.27□□□□□ -0.93
GARNL3-218ENST00000487565 SPATA5Q8NB90 893 aa9.27□□□□□ -0.93
GARNL3-218ENST00000487565 TRERF1Q96PN7 1200 aa9.27□□□□□ -0.93
GARNL3-218ENST00000487565 HAUS7Q99871 368 aa9.27□□□□□ -0.93
GARNL3-218ENST00000487565 DENND2AQ9ULE3 1009 aa9.27□□□□□ -0.93
GARNL3-218ENST00000487565 IQSEC3Q9UPP2 1182 aaPredicted RBP9.27□□□□□ -0.93
GARNL3-218ENST00000487565 RFX7Q2KHR2 1363 aa9.26□□□□□ -0.93
GARNL3-218ENST00000487565 GOLIM4O00461 696 aa9.26□□□□□ -0.93
GARNL3-218ENST00000487565 ECE2O60344 883 aa9.26□□□□□ -0.93
GARNL3-218ENST00000487565 MAP4K4O95819 1239 aaPredicted RBP9.26□□□□□ -0.93
GARNL3-218ENST00000487565 YBX3P16989 372 aaKnown RBP eCLIP9.26□□□□□ -0.93
GARNL3-218ENST00000487565 IARSP41252 1262 aaKnown RBP9.26□□□□□ -0.93
GARNL3-218ENST00000487565 PLA2G4AP47712 749 aa9.26□□□□□ -0.93
GARNL3-218ENST00000487565 PI16Q6UXB8 463 aa9.26□□□□□ -0.93
GARNL3-218ENST00000487565 TBC1D9Q6ZT07 1266 aa9.26□□□□□ -0.93
GARNL3-218ENST00000487565 ARHGAP27Q6ZUM4 889 aa9.26□□□□□ -0.93
GARNL3-218ENST00000487565 NIM1KQ8IY84 436 aa9.26□□□□□ -0.93
GARNL3-218ENST00000487565 UCN2Q96RP3 112 aa9.26□□□□□ -0.93
GARNL3-218ENST00000487565 FSD1Q9BTV5 496 aa9.26□□□□□ -0.93
GARNL3-218ENST00000487565 VPS33BQ9H267 617 aa9.26□□□□□ -0.93
GARNL3-218ENST00000487565 DBNDD1Q9H9R9 158 aa9.26□□□□□ -0.93
GARNL3-218ENST00000487565 CD209Q9NNX6 404 aa9.26□□□□□ -0.93
GARNL3-218ENST00000487565 PAG1Q9NWQ8 432 aa9.26□□□□□ -0.93
GARNL3-218ENST00000487565 HMG20BQ9P0W2 317 aa9.26□□□□□ -0.93
GARNL3-218ENST00000487565 FER1L6Q2WGJ9 1857 aa9.25□□□□□ -0.93
GARNL3-218ENST00000487565 MAST2Q6P0Q8 1798 aa9.25□□□□□ -0.93
GARNL3-218ENST00000487565 ATP9BO43861 1147 aa9.25□□□□□ -0.93
GARNL3-218ENST00000487565 SLURP2P0DP57 97 aa9.25□□□□□ -0.93
GARNL3-218ENST00000487565 IL1R1P14778 569 aa9.25□□□□□ -0.93
GARNL3-218ENST00000487565 SDSP20132 328 aa9.25□□□□□ -0.93
GARNL3-218ENST00000487565 MSX1P28360 303 aa9.25□□□□□ -0.93
GARNL3-218ENST00000487565 ZAP70P43403 619 aa9.25□□□□□ -0.93
GARNL3-218ENST00000487565 TTF1Q15361 905 aaPredicted RBP9.25□□□□□ -0.93
GARNL3-218ENST00000487565 GPR162Q16538 588 aa9.25□□□□□ -0.93
GARNL3-218ENST00000487565 PGBD3Q8N328 593 aa9.25□□□□□ -0.93
GARNL3-218ENST00000487565 TDRD7Q8NHU6 1098 aaKnown RBP9.25□□□□□ -0.93
GARNL3-218ENST00000487565 GLMNQ92990 594 aa9.25□□□□□ -0.93
GARNL3-218ENST00000487565 RILPL2Q969X0 211 aa9.25□□□□□ -0.93
GARNL3-218ENST00000487565 EVI5LQ96CN4 794 aa9.25□□□□□ -0.93
GARNL3-218ENST00000487565 EDC3Q96F86 508 aaKnown RBP9.25□□□□□ -0.93
GARNL3-218ENST00000487565 COL4A5P29400 1685 aa9.25□□□□□ -0.93
GARNL3-218ENST00000487565 USP17L3A6NCW0 530 aa9.24□□□□□ -0.93
GARNL3-218ENST00000487565 USP17L4A6NCW7 530 aa9.24□□□□□ -0.93
GARNL3-218ENST00000487565 A6NJY4 79 aa9.24□□□□□ -0.93
GARNL3-218ENST00000487565 BACH1O14867 736 aa9.24□□□□□ -0.93
GARNL3-218ENST00000487565 CDC45O75419 566 aa9.24□□□□□ -0.93
GARNL3-218ENST00000487565 SRSF11Q05519 484 aaKnown RBP9.24□□□□□ -0.93
GARNL3-218ENST00000487565 LRRFIP1Q32MZ4 808 aaKnown RBP9.24□□□□□ -0.93
GARNL3-218ENST00000487565 USP17L2Q6R6M4 530 aa9.24□□□□□ -0.93
GARNL3-218ENST00000487565 CASC1Q6TDU7 716 aa9.24□□□□□ -0.93
GARNL3-218ENST00000487565 USP17L1Q7RTZ2 530 aa9.24□□□□□ -0.93
GARNL3-218ENST00000487565 PODNQ7Z5L7 613 aa9.24□□□□□ -0.93
GARNL3-218ENST00000487565 TRIM50Q86XT4 487 aa9.24□□□□□ -0.93
GARNL3-218ENST00000487565 SVOPQ8N4V2 548 aa9.24□□□□□ -0.93
GARNL3-218ENST00000487565 ZGPATQ8N5A5 531 aaKnown RBP9.24□□□□□ -0.93
GARNL3-218ENST00000487565 KBTBD3Q8NAB2 608 aa9.24□□□□□ -0.93
GARNL3-218ENST00000487565 WDR66Q8TBY9 1149 aa9.24□□□□□ -0.93
GARNL3-218ENST00000487565 TBC1D22AQ8WUA7 517 aa9.24□□□□□ -0.93
GARNL3-218ENST00000487565 JDP2Q8WYK2 163 aa9.24□□□□□ -0.93
GARNL3-218ENST00000487565 NIFKQ9BYG3 293 aaKnown RBP9.24□□□□□ -0.93
GARNL3-218ENST00000487565 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.24□□□□□ -0.93
GARNL3-218ENST00000487565 RUBCNLQ9H714 662 aa9.24□□□□□ -0.93
GARNL3-218ENST00000487565 DIAPH3Q9NSV4 1193 aa9.24□□□□□ -0.93
GARNL3-218ENST00000487565 JAG2Q9Y219 1238 aa9.24□□□□□ -0.93
GARNL3-218ENST00000487565 MYH13Q9UKX3 1938 aa9.24□□□□□ -0.93
GARNL3-218ENST00000487565 FAM205AQ6ZU69 1335 aa9.24□□□□□ -0.93
GARNL3-218ENST00000487565 TIAM2Q8IVF5 1701 aa9.23□□□□□ -0.93
GARNL3-218ENST00000487565 A6NJR5 290 aa9.23□□□□□ -0.93
GARNL3-218ENST00000487565 GRIN3BO60391 1043 aa9.23□□□□□ -0.93
GARNL3-218ENST00000487565 IDH1O75874 414 aaKnown RBP9.23□□□□□ -0.93
GARNL3-218ENST00000487565 CYP2E1P05181 493 aaPredicted RBP9.23□□□□□ -0.93
GARNL3-218ENST00000487565 LMNB1P20700 586 aa9.23□□□□□ -0.93
GARNL3-218ENST00000487565 ZNF385CQ66K41 422 aaPredicted RBP9.23□□□□□ -0.93
GARNL3-218ENST00000487565 DZIP1Q86YF9 867 aaKnown RBP9.23□□□□□ -0.93
GARNL3-218ENST00000487565 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.23□□□□□ -0.93
GARNL3-218ENST00000487565 WHAMMQ8TF30 809 aa9.23□□□□□ -0.93
GARNL3-218ENST00000487565 ANTXR1Q9H6X2 564 aa9.23□□□□□ -0.93
GARNL3-218ENST00000487565 PIH1D3Q9NQM4 214 aaKnown RBP9.23□□□□□ -0.93
GARNL3-218ENST00000487565 RAI14Q9P0K7 980 aa9.23□□□□□ -0.93
GARNL3-218ENST00000487565 ABCF2Q9UG63 623 aa9.23□□□□□ -0.93
GARNL3-218ENST00000487565 ZNRF3Q9ULT6 936 aa9.23□□□□□ -0.93
GARNL3-218ENST00000487565 SALL1Q9NSC2 1324 aa9.23□□□□□ -0.93
GARNL3-218ENST00000487565 HIP1O00291 1037 aa9.22□□□□□ -0.93
GARNL3-218ENST00000487565 MAP3K12Q12852 859 aa9.22□□□□□ -0.93
GARNL3-218ENST00000487565 MFSD14BQ5SR56 506 aa9.22□□□□□ -0.93
GARNL3-218ENST00000487565 SPTY2D1Q68D10 685 aaPredicted RBP9.22□□□□□ -0.93
GARNL3-218ENST00000487565 ZSCAN25Q6NSZ9 544 aa9.22□□□□□ -0.93
GARNL3-218ENST00000487565 AIDAQ96BJ3 306 aa9.22□□□□□ -0.93
GARNL3-218ENST00000487565 ZNF358Q9NW07 568 aa9.22□□□□□ -0.93
GARNL3-218ENST00000487565 RNF181Q9P0P0 153 aa9.22□□□□□ -0.93
GARNL3-218ENST00000487565 LRP2BPQ9P2M1 347 aa9.22□□□□□ -0.93
GARNL3-218ENST00000487565 SRCAPQ6ZRS2 3230 aa9.22□□□□□ -0.93
GARNL3-218ENST00000487565 DOCK2Q92608 1830 aa9.21□□□□□ -0.93
GARNL3-218ENST00000487565 AKAP11Q9UKA4 1901 aa9.21□□□□□ -0.93
GARNL3-218ENST00000487565 YDJCA8MPS7 323 aa9.21□□□□□ -0.94
GARNL3-218ENST00000487565 CDK2AP1O14519 115 aa9.21□□□□□ -0.94
GARNL3-218ENST00000487565 LDHBP07195 334 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms